RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 TMEM163Q8TC26 289 aa12.87□□□□□ -0.35
RAPGEF1-202ENST00000372190 NDFIP1Q9BT67 221 aa12.87□□□□□ -0.35
RAPGEF1-202ENST00000372190 PKIBQ9C010 78 aa12.87□□□□□ -0.35
RAPGEF1-202ENST00000372190 BRWD3Q6RI45 1802 aa12.87□□□□□ -0.35
RAPGEF1-202ENST00000372190 DBHP09172 617 aa12.87□□□□□ -0.35
RAPGEF1-202ENST00000372190 UBL4AP11441 157 aa12.87□□□□□ -0.35
RAPGEF1-202ENST00000372190 ATP1B3P54709 279 aa12.87□□□□□ -0.35
RAPGEF1-202ENST00000372190 RAB38P57729 211 aa12.87□□□□□ -0.35
RAPGEF1-202ENST00000372190 LHX4Q969G2 390 aa12.87□□□□□ -0.35
RAPGEF1-202ENST00000372190 COLQQ9Y215 455 aaPredicted RBP12.87□□□□□ -0.35
RAPGEF1-202ENST00000372190 ANKRD30BLA7E2S9 258 aa12.87□□□□□ -0.35
RAPGEF1-202ENST00000372190 WDR1O75083 606 aa12.87□□□□□ -0.35
RAPGEF1-202ENST00000372190 OR2J2O76002 312 aa12.87□□□□□ -0.35
RAPGEF1-202ENST00000372190 IL9P15248 144 aa12.87□□□□□ -0.35
RAPGEF1-202ENST00000372190 SPEM2Q0P670 501 aa12.87□□□□□ -0.35
RAPGEF1-202ENST00000372190 SFXN4Q6P4A7 337 aa12.87□□□□□ -0.35
RAPGEF1-202ENST00000372190 ZNF429Q86V71 674 aa12.87□□□□□ -0.35
RAPGEF1-202ENST00000372190 MKXQ8IYA7 352 aa12.87□□□□□ -0.35
RAPGEF1-202ENST00000372190 ZNF595Q8IYB9 648 aa12.87□□□□□ -0.35
RAPGEF1-202ENST00000372190 LGALS14Q8TCE9 139 aa12.87□□□□□ -0.35
RAPGEF1-202ENST00000372190 ASB11Q8WXH4 323 aa12.87□□□□□ -0.35
RAPGEF1-202ENST00000372190 NXF5Q9H1B4 397 aaKnown RBP12.87□□□□□ -0.35
RAPGEF1-202ENST00000372190 SLC7A7Q9UM01 511 aa12.87□□□□□ -0.35
RAPGEF1-202ENST00000372190 SIPA1L3O60292 1781 aaPredicted RBP12.87□□□□□ -0.35
RAPGEF1-202ENST00000372190 IGLV3-10A0A075B6K4 115 aa12.87□□□□□ -0.35
RAPGEF1-202ENST00000372190 ZNF98A6NK75 572 aa12.87□□□□□ -0.35
RAPGEF1-202ENST00000372190 H0Y8X5 98 aa12.87□□□□□ -0.35
RAPGEF1-202ENST00000372190 RGS13O14921 159 aa12.87□□□□□ -0.35
RAPGEF1-202ENST00000372190 SEMA7AO75326 666 aa12.87□□□□□ -0.35
RAPGEF1-202ENST00000372190 TGM1P22735 817 aa12.87□□□□□ -0.35
RAPGEF1-202ENST00000372190 FHITP49789 147 aa12.87□□□□□ -0.35
RAPGEF1-202ENST00000372190 CDC20Q12834 499 aa12.87□□□□□ -0.35
RAPGEF1-202ENST00000372190 HES3Q5TGS1 186 aa12.87□□□□□ -0.35
RAPGEF1-202ENST00000372190 PRAMEF8Q5VWM4 474 aa12.87□□□□□ -0.35
RAPGEF1-202ENST00000372190 PRAMEF7Q5VXH5 474 aa12.87□□□□□ -0.35
RAPGEF1-202ENST00000372190 LRP11Q86VZ4 500 aa12.87□□□□□ -0.35
RAPGEF1-202ENST00000372190 NMES1Q9C002 83 aa12.87□□□□□ -0.35
RAPGEF1-202ENST00000372190 FBLL1A6NHQ2 334 aaKnown RBP12.87□□□□□ -0.35
RAPGEF1-202ENST00000372190 F5H5K5 113 aa12.87□□□□□ -0.35
RAPGEF1-202ENST00000372190 SULT2B1O00204 365 aa12.87□□□□□ -0.35
RAPGEF1-202ENST00000372190 FOXE1O00358 373 aaPredicted RBP12.87□□□□□ -0.35
RAPGEF1-202ENST00000372190 ZNF354AO60765 605 aaPredicted RBP12.87□□□□□ -0.35
RAPGEF1-202ENST00000372190 GABREP78334 506 aa12.87□□□□□ -0.35
RAPGEF1-202ENST00000372190 ZNF343Q6P1L6 599 aa12.87□□□□□ -0.35
RAPGEF1-202ENST00000372190 BPIFA4PQ86YQ2 179 aa12.87□□□□□ -0.35
RAPGEF1-202ENST00000372190 OR5L1Q8NGL2 311 aa12.87□□□□□ -0.35
RAPGEF1-202ENST00000372190 CFHR5Q9BXR6 569 aa12.87□□□□□ -0.35
RAPGEF1-202ENST00000372190 TAS2R5Q9NYW4 299 aa12.87□□□□□ -0.35
RAPGEF1-202ENST00000372190 CLDN34H7C241 214 aa12.86□□□□□ -0.35
RAPGEF1-202ENST00000372190 GALR1P47211 349 aa12.86□□□□□ -0.35
RAPGEF1-202ENST00000372190 TRA2BP62995 288 aaKnown RBP12.86□□□□□ -0.35
RAPGEF1-202ENST00000372190 MAJINQ3KP22 176 aa12.86□□□□□ -0.35
RAPGEF1-202ENST00000372190 MEPCEQ7L2J0 689 aaKnown RBP12.86□□□□□ -0.35
RAPGEF1-202ENST00000372190 HES4Q9HCC6 221 aa12.86□□□□□ -0.35
RAPGEF1-202ENST00000372190 NRIP3Q9NQ35 241 aa12.86□□□□□ -0.35
RAPGEF1-202ENST00000372190 WASHC3Q9Y3C0 194 aa12.86□□□□□ -0.35
RAPGEF1-202ENST00000372190 GPR45Q9Y5Y3 372 aa12.86□□□□□ -0.35
RAPGEF1-202ENST00000372190 CSNK1G3Q9Y6M4 447 aa12.86□□□□□ -0.35
RAPGEF1-202ENST00000372190 SCG5P05408 212 aa12.86□□□□□ -0.35
RAPGEF1-202ENST00000372190 AKR1C3P42330 323 aa12.86□□□□□ -0.35
RAPGEF1-202ENST00000372190 TAZQ16635 292 aa12.86□□□□□ -0.35
RAPGEF1-202ENST00000372190 HLA-BQ31612 363 aa12.86□□□□□ -0.35
RAPGEF1-202ENST00000372190 CPEB2Q7Z5Q1 589 aaKnown RBP12.86□□□□□ -0.35
RAPGEF1-202ENST00000372190 TMEM178AQ8NBL3 297 aa12.86□□□□□ -0.35
RAPGEF1-202ENST00000372190 OR1L3Q8NH93 324 aa12.86□□□□□ -0.35
RAPGEF1-202ENST00000372190 CITED2Q99967 270 aaPredicted RBP12.86□□□□□ -0.35
RAPGEF1-202ENST00000372190 INIPQ9NRY2 104 aa12.86□□□□□ -0.35
RAPGEF1-202ENST00000372190 OLAHQ9NV23 265 aa12.86□□□□□ -0.35
RAPGEF1-202ENST00000372190 CNIH4Q9P003 139 aa12.86□□□□□ -0.35
RAPGEF1-202ENST00000372190 A0A0B4J203 849 aa12.86□□□□□ -0.35
RAPGEF1-202ENST00000372190 CD79AP11912 226 aa12.86□□□□□ -0.35
RAPGEF1-202ENST00000372190 ENPP1P22413 925 aa12.86□□□□□ -0.35
RAPGEF1-202ENST00000372190 EXOSC7Q15024 291 aaKnown RBP12.86□□□□□ -0.35
RAPGEF1-202ENST00000372190 SLC36A2Q495M3 483 aa12.86□□□□□ -0.35
RAPGEF1-202ENST00000372190 FCRLBQ6BAA4 426 aa12.86□□□□□ -0.35
RAPGEF1-202ENST00000372190 CNTN4Q8IWV2 1026 aa12.86□□□□□ -0.35
RAPGEF1-202ENST00000372190 SECTM1Q8WVN6 248 aa12.86□□□□□ -0.35
RAPGEF1-202ENST00000372190 RAB24Q969Q5 203 aa12.86□□□□□ -0.35
RAPGEF1-202ENST00000372190 SPAG8Q99932 426 aaPredicted RBP12.86□□□□□ -0.35
RAPGEF1-202ENST00000372190 OR6C3Q9NZP0 311 aa12.86□□□□□ -0.35
RAPGEF1-202ENST00000372190 DHCR7Q9UBM7 475 aaKnown RBP12.86□□□□□ -0.35
RAPGEF1-202ENST00000372190 AKAP11Q9UKA4 1901 aa12.86□□□□□ -0.35
RAPGEF1-202ENST00000372190 ZNF264O43296 627 aa12.86□□□□□ -0.35
RAPGEF1-202ENST00000372190 LMX1BO60663 402 aa12.86□□□□□ -0.35
RAPGEF1-202ENST00000372190 FCGR2CP31995 323 aa12.86□□□□□ -0.35
RAPGEF1-202ENST00000372190 APLNRP35414 380 aa12.86□□□□□ -0.35
RAPGEF1-202ENST00000372190 NKX2-1P43699 371 aaPredicted RBP12.86□□□□□ -0.35
RAPGEF1-202ENST00000372190 SYT11Q9BT88 431 aa12.86□□□□□ -0.35
RAPGEF1-202ENST00000372190 DPH1Q9BZG8 443 aa12.86□□□□□ -0.35
RAPGEF1-202ENST00000372190 PLEKHA2Q9HB19 425 aa12.86□□□□□ -0.35
RAPGEF1-202ENST00000372190 CBLCQ9ULV8 474 aa12.86□□□□□ -0.35
RAPGEF1-202ENST00000372190 MRPS2Q9Y399 296 aaKnown RBP12.86□□□□□ -0.35
RAPGEF1-202ENST00000372190 M0R296 226 aa12.86□□□□□ -0.35
RAPGEF1-202ENST00000372190 HIST1H1TP22492 207 aaPredicted RBP12.86□□□□□ -0.35
RAPGEF1-202ENST00000372190 OR8G2PQ6IF36 304 aa12.86□□□□□ -0.35
RAPGEF1-202ENST00000372190 STACQ99469 402 aa12.86□□□□□ -0.35
RAPGEF1-202ENST00000372190 HEYLQ9NQ87 328 aaPredicted RBP12.86□□□□□ -0.35
RAPGEF1-202ENST00000372190 AIFM1O95831 613 aa12.85□□□□□ -0.35
RAPGEF1-202ENST00000372190 ATP1B1P05026 303 aa12.85□□□□□ -0.35
RAPGEF1-202ENST00000372190 C21orf33P30042 268 aaPredicted RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms