RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 SPDEFO95238 335 aa10.27□□□□□ -0.77
TSPAN1-201ENST00000372003 SIX6O95475 246 aa10.27□□□□□ -0.77
TSPAN1-201ENST00000372003 GTF2F2P13984 249 aa10.27□□□□□ -0.77
TSPAN1-201ENST00000372003 MAOAP21397 527 aa10.27□□□□□ -0.77
TSPAN1-201ENST00000372003 EFNA3P52797 238 aa10.27□□□□□ -0.77
TSPAN1-201ENST00000372003 MGAT2Q10469 447 aa10.27□□□□□ -0.77
TSPAN1-201ENST00000372003 SSPNQ14714 243 aa10.27□□□□□ -0.77
TSPAN1-201ENST00000372003 MICBQ29980 383 aa10.27□□□□□ -0.77
TSPAN1-201ENST00000372003 C2orf68Q2NKX9 166 aa10.27□□□□□ -0.77
TSPAN1-201ENST00000372003 C4orf46Q504U0 113 aa10.27□□□□□ -0.77
TSPAN1-201ENST00000372003 PAN3Q58A45 887 aaKnown RBP10.27□□□□□ -0.77
TSPAN1-201ENST00000372003 JMJD6Q6NYC1 403 aaPredicted RBP10.27□□□□□ -0.77
TSPAN1-201ENST00000372003 STEAP1BQ6NZ63 245 aa10.27□□□□□ -0.77
TSPAN1-201ENST00000372003 FIGNL1Q6PIW4 674 aa10.27□□□□□ -0.77
TSPAN1-201ENST00000372003 ATRAIDQ6UW56 229 aa10.27□□□□□ -0.77
TSPAN1-201ENST00000372003 CDC20BQ86Y33 519 aa10.27□□□□□ -0.77
TSPAN1-201ENST00000372003 OR4N5Q8IXE1 308 aa10.27□□□□□ -0.77
TSPAN1-201ENST00000372003 SVBPQ8N300 66 aa10.27□□□□□ -0.77
TSPAN1-201ENST00000372003 EXD3Q8N9H8 876 aa10.27□□□□□ -0.77
TSPAN1-201ENST00000372003 ZSCAN1Q8NBB4 408 aa10.27□□□□□ -0.77
TSPAN1-201ENST00000372003 OR5M8Q8NGP6 311 aa10.27□□□□□ -0.77
TSPAN1-201ENST00000372003 MCHR2Q969V1 340 aa10.27□□□□□ -0.77
TSPAN1-201ENST00000372003 C8orf44Q96CB5 159 aa10.27□□□□□ -0.77
TSPAN1-201ENST00000372003 ADAD1Q96M93 576 aaKnown RBP10.27□□□□□ -0.77
TSPAN1-201ENST00000372003 NMNAT3Q96T66 252 aa10.27□□□□□ -0.77
TSPAN1-201ENST00000372003 PRTFDC1Q9NRG1 225 aa10.27□□□□□ -0.77
TSPAN1-201ENST00000372003 COMMD9Q9P000 198 aa10.27□□□□□ -0.77
TSPAN1-201ENST00000372003 FRRS1LQ9P0K9 344 aa10.27□□□□□ -0.77
TSPAN1-201ENST00000372003 TNFSF18Q9UNG2 199 aa10.27□□□□□ -0.77
TSPAN1-201ENST00000372003 MRPS33Q9Y291 106 aaKnown RBP10.27□□□□□ -0.77
TSPAN1-201ENST00000372003 PLEKHA6Q9Y2H5 1048 aa10.27□□□□□ -0.77
TSPAN1-201ENST00000372003 A0A087WV48 116 aa10.26□□□□□ -0.77
TSPAN1-201ENST00000372003 NPIPA5A0A0B4J1W7 369 aa10.26□□□□□ -0.77
TSPAN1-201ENST00000372003 LOC100289279A0A1B0GTE1 492 aa10.26□□□□□ -0.77
TSPAN1-201ENST00000372003 TMEM272A0A1B0GTI8 110 aa10.26□□□□□ -0.77
TSPAN1-201ENST00000372003 OR14I1A6ND48 311 aa10.26□□□□□ -0.77
TSPAN1-201ENST00000372003 ZNF98A6NK75 572 aa10.26□□□□□ -0.77
TSPAN1-201ENST00000372003 OR4C45A6NMZ5 311 aa10.26□□□□□ -0.77
TSPAN1-201ENST00000372003 NPIPA7E9PJI5 369 aa10.26□□□□□ -0.77
TSPAN1-201ENST00000372003 ALOX12BO75342 701 aa10.26□□□□□ -0.77
TSPAN1-201ENST00000372003 ATG12O94817 140 aa10.26□□□□□ -0.77
TSPAN1-201ENST00000372003 WNT11O96014 354 aa10.26□□□□□ -0.77
TSPAN1-201ENST00000372003 OR4E1P0C645 316 aa10.26□□□□□ -0.77
TSPAN1-201ENST00000372003 NPIPA8P0DM63 369 aa10.26□□□□□ -0.77
TSPAN1-201ENST00000372003 CD37P11049 281 aa10.26□□□□□ -0.77
TSPAN1-201ENST00000372003 MPZP25189 248 aa10.26□□□□□ -0.77
TSPAN1-201ENST00000372003 CAPZA1P52907 286 aa10.26□□□□□ -0.77
TSPAN1-201ENST00000372003 ID2Q02363 134 aa10.26□□□□□ -0.77
TSPAN1-201ENST00000372003 ZNHIT3Q15649 155 aaPredicted RBP10.26□□□□□ -0.77
TSPAN1-201ENST00000372003 NSDHLQ15738 373 aa10.26□□□□□ -0.77
TSPAN1-201ENST00000372003 LY6G6FQ5SQ64 297 aa10.26□□□□□ -0.77
TSPAN1-201ENST00000372003 LIPNQ5VXI9 398 aa10.26□□□□□ -0.77
TSPAN1-201ENST00000372003 C11orf87Q6NUJ2 197 aa10.26□□□□□ -0.77
TSPAN1-201ENST00000372003 TMEM205Q6UW68 189 aa10.26□□□□□ -0.77
TSPAN1-201ENST00000372003 C17orf107Q6ZR85 190 aa10.26□□□□□ -0.77
TSPAN1-201ENST00000372003 ACOT7LQ6ZUV0 252 aa10.26□□□□□ -0.77
TSPAN1-201ENST00000372003 LANCL3Q6ZV70 420 aa10.26□□□□□ -0.77
TSPAN1-201ENST00000372003 JAZF1Q86VZ6 243 aa10.26□□□□□ -0.77
TSPAN1-201ENST00000372003 BEST3Q8N1M1 668 aa10.26□□□□□ -0.77
TSPAN1-201ENST00000372003 BPIFCQ8NFQ6 507 aa10.26□□□□□ -0.77
TSPAN1-201ENST00000372003 OR51S1Q8NGJ8 323 aa10.26□□□□□ -0.77
TSPAN1-201ENST00000372003 OR6K6Q8NGW6 343 aa10.26□□□□□ -0.77
TSPAN1-201ENST00000372003 ADAMTS18Q8TE60 1221 aa10.26□□□□□ -0.77
TSPAN1-201ENST00000372003 METTL21AQ8WXB1 218 aa10.26□□□□□ -0.77
TSPAN1-201ENST00000372003 TSLPQ969D9 159 aa10.26□□□□□ -0.77
TSPAN1-201ENST00000372003 TSPAN10Q9H1Z9 355 aaPredicted RBP10.26□□□□□ -0.77
TSPAN1-201ENST00000372003 MRM2Q9UI43 246 aaKnown RBP10.26□□□□□ -0.77
TSPAN1-201ENST00000372003 CELSR3Q9NYQ7 3312 aa10.26□□□□□ -0.77
TSPAN1-201ENST00000372003 SCN3AQ9NY46 2000 aa10.26□□□□□ -0.77
TSPAN1-201ENST00000372003 IGHV3-20A0A0C4DH32 117 aa10.25□□□□□ -0.77
TSPAN1-201ENST00000372003 TMEM82A0PJX8 343 aa10.25□□□□□ -0.77
TSPAN1-201ENST00000372003 RNF222A6NCQ9 220 aa10.25□□□□□ -0.77
TSPAN1-201ENST00000372003 OR5H14A6NHG9 310 aa10.25□□□□□ -0.77
TSPAN1-201ENST00000372003 ZNF891A8MT65 544 aaPredicted RBP10.25□□□□□ -0.77
TSPAN1-201ENST00000372003 NPIPB9F8W1W9 429 aa10.25□□□□□ -0.77
TSPAN1-201ENST00000372003 SLC17A2O00624 439 aa10.25□□□□□ -0.77
TSPAN1-201ENST00000372003 CD74P04233 296 aa10.25□□□□□ -0.77
TSPAN1-201ENST00000372003 CD14P08571 375 aa10.25□□□□□ -0.77
TSPAN1-201ENST00000372003 CXADRP78310 365 aa10.25□□□□□ -0.77
TSPAN1-201ENST00000372003 DEFA5Q01523 94 aa10.25□□□□□ -0.77
TSPAN1-201ENST00000372003 SNTB1Q13884 538 aaKnown RBP10.25□□□□□ -0.77
TSPAN1-201ENST00000372003 TSC22D1Q15714 1073 aa10.25□□□□□ -0.77
TSPAN1-201ENST00000372003 C10orf91Q5T1B1 145 aa10.25□□□□□ -0.77
TSPAN1-201ENST00000372003 FAM166AQ6J272 317 aa10.25□□□□□ -0.77
TSPAN1-201ENST00000372003 NDUFAF7Q7L592 441 aa10.25□□□□□ -0.77
TSPAN1-201ENST00000372003 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.25□□□□□ -0.77
TSPAN1-201ENST00000372003 GABRG1Q8N1C3 465 aa10.25□□□□□ -0.77
TSPAN1-201ENST00000372003 OR51L1Q8NGJ5 315 aa10.25□□□□□ -0.77
TSPAN1-201ENST00000372003 OR2G2Q8NGZ5 317 aa10.25□□□□□ -0.77
TSPAN1-201ENST00000372003 LILRB1Q8NHL6 650 aaPredicted RBP10.25□□□□□ -0.77
TSPAN1-201ENST00000372003 ZNRF4Q8WWF5 429 aa10.25□□□□□ -0.77
TSPAN1-201ENST00000372003 SMAD5Q99717 465 aaKnown RBP10.25□□□□□ -0.77
TSPAN1-201ENST00000372003 FAM117AQ9C073 453 aa10.25□□□□□ -0.77
TSPAN1-201ENST00000372003 HIF3AQ9Y2N7 669 aa10.25□□□□□ -0.77
TSPAN1-201ENST00000372003 AHCTF1Q8WYP5 2266 aa10.25□□□□□ -0.77
TSPAN1-201ENST00000372003 TMEM218A2RU14 115 aa10.25□□□□□ -0.77
TSPAN1-201ENST00000372003 FAM74A7A6NL05 159 aa10.25□□□□□ -0.77
TSPAN1-201ENST00000372003 MASP2O00187 686 aa10.25□□□□□ -0.77
TSPAN1-201ENST00000372003 NUPL2O15504 423 aaKnown RBP10.25□□□□□ -0.77
TSPAN1-201ENST00000372003 FGF17O60258 216 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms