RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 KCNJ15Q99712 375 aa23.1■■□□□ 1.29
ATPAF1-202ENST00000371937 PLGRKTQ9HBL7 147 aa23.1■■□□□ 1.29
ATPAF1-202ENST00000371937 PLEK2Q9NYT0 353 aa23.1■■□□□ 1.29
ATPAF1-202ENST00000371937 NCOA6Q14686 2063 aaPredicted RBP23.09■■□□□ 1.29
ATPAF1-202ENST00000371937 PIN1P1O15428 100 aa23.09■■□□□ 1.29
ATPAF1-202ENST00000371937 NCR1O76036 304 aa23.09■■□□□ 1.29
ATPAF1-202ENST00000371937 SOX2P48431 317 aa23.09■■□□□ 1.29
ATPAF1-202ENST00000371937 DCTN2Q13561 401 aaKnown RBP23.09■■□□□ 1.29
ATPAF1-202ENST00000371937 CCDC92Q53HC0 331 aaPredicted RBP23.09■■□□□ 1.29
ATPAF1-202ENST00000371937 SLC16A14Q7RTX9 510 aa23.09■■□□□ 1.29
ATPAF1-202ENST00000371937 PBOV1Q9GZY1 135 aa23.09■■□□□ 1.29
ATPAF1-202ENST00000371937 SLITRK2Q9H156 845 aa23.09■■□□□ 1.29
ATPAF1-202ENST00000371937 BRD7Q9NPI1 651 aa23.09■■□□□ 1.29
ATPAF1-202ENST00000371937 LUZP4Q9P127 313 aa23.09■■□□□ 1.29
ATPAF1-202ENST00000371937 HHLA2Q9UM44 414 aa23.09■■□□□ 1.29
ATPAF1-202ENST00000371937 TIMM10BQ9Y5J6 103 aa23.09■■□□□ 1.29
ATPAF1-202ENST00000371937 PTPRQQ9UMZ3 2332 aa23.08■■□□□ 1.29
ATPAF1-202ENST00000371937 APOC1P02654 83 aa23.08■■□□□ 1.29
ATPAF1-202ENST00000371937 ACHEP22303 614 aa23.08■■□□□ 1.29
ATPAF1-202ENST00000371937 PRKXP51817 358 aa23.08■■□□□ 1.29
ATPAF1-202ENST00000371937 ZNF627Q7L945 461 aa23.08■■□□□ 1.29
ATPAF1-202ENST00000371937 ELMOD2Q8IZ81 293 aa23.08■■□□□ 1.29
ATPAF1-202ENST00000371937 OR51A4Q8NGJ6 313 aa23.08■■□□□ 1.29
ATPAF1-202ENST00000371937 OR10AC1Q8NH08 325 aa23.08■■□□□ 1.29
ATPAF1-202ENST00000371937 TMEM106AQ96A25 262 aa23.08■■□□□ 1.29
ATPAF1-202ENST00000371937 HDHD2Q9H0R4 259 aa23.08■■□□□ 1.29
ATPAF1-202ENST00000371937 NUFIP1Q9UHK0 495 aaKnown RBP23.08■■□□□ 1.29
ATPAF1-202ENST00000371937 CACNA1GO43497 2377 aa23.08■■□□□ 1.28
ATPAF1-202ENST00000371937 TRBV5-7A0A0A0MS05 114 aa23.08■■□□□ 1.28
ATPAF1-202ENST00000371937 CTDSP2O14595 271 aa23.08■■□□□ 1.28
ATPAF1-202ENST00000371937 PDCD5O14737 125 aa23.08■■□□□ 1.28
ATPAF1-202ENST00000371937 RGS5O15539 181 aa23.08■■□□□ 1.28
ATPAF1-202ENST00000371937 ZNHIT1O43257 154 aa23.08■■□□□ 1.28
ATPAF1-202ENST00000371937 SGCEO43556 437 aa23.08■■□□□ 1.28
ATPAF1-202ENST00000371937 MAGEB1P43366 347 aa23.08■■□□□ 1.28
ATPAF1-202ENST00000371937 OR3A2P47893 321 aa23.08■■□□□ 1.28
ATPAF1-202ENST00000371937 ARF1P84077 181 aaKnown RBP23.08■■□□□ 1.28
ATPAF1-202ENST00000371937 ECH1Q13011 328 aa23.08■■□□□ 1.28
ATPAF1-202ENST00000371937 RAB35Q15286 201 aa23.08■■□□□ 1.28
ATPAF1-202ENST00000371937 ACSF3Q4G176 576 aaPredicted RBP23.08■■□□□ 1.28
ATPAF1-202ENST00000371937 OR2A2Q6IF42 318 aa23.08■■□□□ 1.28
ATPAF1-202ENST00000371937 ZNF283Q8N7M2 679 aa23.08■■□□□ 1.28
ATPAF1-202ENST00000371937 C12orf49Q9H741 205 aa23.08■■□□□ 1.28
ATPAF1-202ENST00000371937 TCF7L1Q9HCS4 588 aa23.08■■□□□ 1.28
ATPAF1-202ENST00000371937 ZNF71Q9NQZ8 489 aaPredicted RBP23.08■■□□□ 1.28
ATPAF1-202ENST00000371937 MALT1Q9UDY8 824 aa23.08■■□□□ 1.28
ATPAF1-202ENST00000371937 DHDHQ9UQ10 334 aa23.08■■□□□ 1.28
ATPAF1-202ENST00000371937 CD2P06729 351 aa23.07■■□□□ 1.28
ATPAF1-202ENST00000371937 BMP4P12644 408 aa23.07■■□□□ 1.28
ATPAF1-202ENST00000371937 CX3CR1P49238 355 aa23.07■■□□□ 1.28
ATPAF1-202ENST00000371937 GALK2Q01415 458 aa23.07■■□□□ 1.28
ATPAF1-202ENST00000371937 FAPQ12884 760 aa23.07■■□□□ 1.28
ATPAF1-202ENST00000371937 FBXW9Q5XUX1 488 aa23.07■■□□□ 1.28
ATPAF1-202ENST00000371937 FAM214BQ7L5A3 538 aa23.07■■□□□ 1.28
ATPAF1-202ENST00000371937 NR2C2APQ86WQ0 139 aa23.07■■□□□ 1.28
ATPAF1-202ENST00000371937 SKA3Q8IX90 412 aa23.07■■□□□ 1.28
ATPAF1-202ENST00000371937 ACOT12Q8WYK0 555 aa23.07■■□□□ 1.28
ATPAF1-202ENST00000371937 BORCS5Q969J3 196 aa23.07■■□□□ 1.28
ATPAF1-202ENST00000371937 CEP19Q96LK0 163 aa23.07■■□□□ 1.28
ATPAF1-202ENST00000371937 ZNF121P58317 390 aaPredicted RBP23.06■■□□□ 1.28
ATPAF1-202ENST00000371937 DDI2Q5TDH0 399 aa23.06■■□□□ 1.28
ATPAF1-202ENST00000371937 ZNF585AQ6P3V2 769 aa23.06■■□□□ 1.28
ATPAF1-202ENST00000371937 MZT2AQ6P582 158 aa23.06■■□□□ 1.28
ATPAF1-202ENST00000371937 SPTSSAQ969W0 71 aa23.06■■□□□ 1.28
ATPAF1-202ENST00000371937 KCTD12Q96CX2 325 aaKnown RBP23.06■■□□□ 1.28
ATPAF1-202ENST00000371937 SLC24A3Q9HC58 644 aa23.06■■□□□ 1.28
ATPAF1-202ENST00000371937 TUBD1Q9UJT1 453 aa23.06■■□□□ 1.28
ATPAF1-202ENST00000371937 IGF2RP11717 2491 aa23.06■■□□□ 1.28
ATPAF1-202ENST00000371937 LOC107986453A0A1B0GWG9 222 aa23.05■■□□□ 1.28
ATPAF1-202ENST00000371937 TTRP02766 147 aa23.05■■□□□ 1.28
ATPAF1-202ENST00000371937 GABRA1P14867 456 aa23.05■■□□□ 1.28
ATPAF1-202ENST00000371937 ZNF32P17041 273 aa23.05■■□□□ 1.28
ATPAF1-202ENST00000371937 NSUN5P2Q63ZY6 315 aa23.05■■□□□ 1.28
ATPAF1-202ENST00000371937 SFXN4Q6P4A7 337 aa23.05■■□□□ 1.28
ATPAF1-202ENST00000371937 FGD2Q7Z6J4 655 aa23.05■■□□□ 1.28
ATPAF1-202ENST00000371937 LUZP2Q86TE4 346 aa23.05■■□□□ 1.28
ATPAF1-202ENST00000371937 MFSD4AQ8N468 514 aa23.05■■□□□ 1.28
ATPAF1-202ENST00000371937 CMAHPQ9Y471 501 aa23.05■■□□□ 1.28
ATPAF1-202ENST00000371937 NOTOA8MTQ0 251 aa23.05■■□□□ 1.28
ATPAF1-202ENST00000371937 OTX1P32242 354 aaPredicted RBP23.05■■□□□ 1.28
ATPAF1-202ENST00000371937 ASB5Q8WWX0 329 aa23.05■■□□□ 1.28
ATPAF1-202ENST00000371937 PRSS50Q9UI38 385 aa23.05■■□□□ 1.28
ATPAF1-202ENST00000371937 DOK2O60496 412 aa23.04■■□□□ 1.28
ATPAF1-202ENST00000371937 PTGER4P35408 488 aa23.04■■□□□ 1.28
ATPAF1-202ENST00000371937 OR10A3P58181 314 aa23.04■■□□□ 1.28
ATPAF1-202ENST00000371937 GUSBP1Q15486 140 aa23.04■■□□□ 1.28
ATPAF1-202ENST00000371937 SLC36A2Q495M3 483 aa23.04■■□□□ 1.28
ATPAF1-202ENST00000371937 SPANXN2Q5MJ10 180 aa23.04■■□□□ 1.28
ATPAF1-202ENST00000371937 IDNKQ5T6J7 187 aa23.04■■□□□ 1.28
ATPAF1-202ENST00000371937 ZNF324BQ6AW86 544 aaPredicted RBP23.04■■□□□ 1.28
ATPAF1-202ENST00000371937 FAM122AQ96E09 287 aa23.04■■□□□ 1.28
ATPAF1-202ENST00000371937 OR2H1Q9GZK4 316 aa23.04■■□□□ 1.28
ATPAF1-202ENST00000371937 ZCCHC4Q9H5U6 513 aa23.04■■□□□ 1.28
ATPAF1-202ENST00000371937 A0A0G2JK05 382 aa23.03■■□□□ 1.28
ATPAF1-202ENST00000371937 F5H5K5 113 aa23.03■■□□□ 1.28
ATPAF1-202ENST00000371937 H3BSH0 61 aa23.03■■□□□ 1.28
ATPAF1-202ENST00000371937 P2RY10O00398 339 aa23.03■■□□□ 1.28
ATPAF1-202ENST00000371937 SYNGR3O43761 229 aa23.03■■□□□ 1.28
ATPAF1-202ENST00000371937 ACSM4P0C7M7 580 aa23.03■■□□□ 1.28
ATPAF1-202ENST00000371937 FAM87AP0C7U9 286 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms