RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 NUBPLQ8TB37 319 aa10.46□□□□□ -0.73
PDE6C-201ENST00000371447 NUDCD2Q8WVJ2 157 aa10.46□□□□□ -0.73
PDE6C-201ENST00000371447 MCHR2Q969V1 340 aa10.46□□□□□ -0.73
PDE6C-201ENST00000371447 TINAGL1Q9GZM7 467 aaPredicted RBP10.46□□□□□ -0.73
PDE6C-201ENST00000371447 TGIF2Q9GZN2 237 aa10.46□□□□□ -0.73
PDE6C-201ENST00000371447 DKKL1Q9UK85 242 aa10.46□□□□□ -0.73
PDE6C-201ENST00000371447 R4GMQ9 66 aa10.46□□□□□ -0.73
PDE6C-201ENST00000371447 NSG1A0A0A6YYJ2 146 aa10.46□□□□□ -0.74
PDE6C-201ENST00000371447 ANKRD34BA5PLL1 514 aa10.46□□□□□ -0.74
PDE6C-201ENST00000371447 PHYHO14832 338 aa10.46□□□□□ -0.74
PDE6C-201ENST00000371447 RAB40ALP0C0E4 278 aa10.46□□□□□ -0.74
PDE6C-201ENST00000371447 CALCBP10092 127 aa10.46□□□□□ -0.74
PDE6C-201ENST00000371447 TCN2P20062 427 aa10.46□□□□□ -0.74
PDE6C-201ENST00000371447 LAP3P28838 519 aa10.46□□□□□ -0.74
PDE6C-201ENST00000371447 GUCA1AP43080 201 aaPredicted RBP10.46□□□□□ -0.74
PDE6C-201ENST00000371447 BTG1P62324 171 aa10.46□□□□□ -0.74
PDE6C-201ENST00000371447 C9orf135Q5VTT2 229 aa10.46□□□□□ -0.74
PDE6C-201ENST00000371447 C3orf33Q6P1S2 294 aa10.46□□□□□ -0.74
PDE6C-201ENST00000371447 CATSPERDQ86XM0 798 aa10.46□□□□□ -0.74
PDE6C-201ENST00000371447 RAB40AQ8WXH6 277 aa10.46□□□□□ -0.74
PDE6C-201ENST00000371447 KCNK17Q96T54 332 aa10.46□□□□□ -0.74
PDE6C-201ENST00000371447 C12orf10Q9HB07 376 aa10.46□□□□□ -0.74
PDE6C-201ENST00000371447 B3GAT1Q9P2W7 334 aa10.46□□□□□ -0.74
PDE6C-201ENST00000371447 GDF2Q9UK05 429 aaPredicted RBP10.46□□□□□ -0.74
PDE6C-201ENST00000371447 SPEF1Q9Y4P9 236 aa10.46□□□□□ -0.74
PDE6C-201ENST00000371447 TRBV5-7A0A0A0MS05 114 aa10.45□□□□□ -0.74
PDE6C-201ENST00000371447 A0A1W2PP11 408 aa10.45□□□□□ -0.74
PDE6C-201ENST00000371447 A6NIZ1 184 aa10.45□□□□□ -0.74
PDE6C-201ENST00000371447 FAM25EA8MYX2 175 aa10.45□□□□□ -0.74
PDE6C-201ENST00000371447 AMY2AP04746 511 aa10.45□□□□□ -0.74
PDE6C-201ENST00000371447 ACSM4P0C7M7 580 aa10.45□□□□□ -0.74
PDE6C-201ENST00000371447 SPINK2P20155 84 aa10.45□□□□□ -0.74
PDE6C-201ENST00000371447 ZP1P60852 638 aa10.45□□□□□ -0.74
PDE6C-201ENST00000371447 RAP1BP61224 184 aa10.45□□□□□ -0.74
PDE6C-201ENST00000371447 RAP1AP62834 184 aa10.45□□□□□ -0.74
PDE6C-201ENST00000371447 SRYQ05066 204 aa10.45□□□□□ -0.74
PDE6C-201ENST00000371447 ST7LQ8TDW4 575 aa10.45□□□□□ -0.74
PDE6C-201ENST00000371447 HYLS1Q96M11 299 aa10.45□□□□□ -0.74
PDE6C-201ENST00000371447 ZNF385AQ96PM9 386 aaKnown RBP10.45□□□□□ -0.74
PDE6C-201ENST00000371447 ZCCHC4Q9H5U6 513 aa10.45□□□□□ -0.74
PDE6C-201ENST00000371447 HPF1Q9NWY4 346 aa10.45□□□□□ -0.74
PDE6C-201ENST00000371447 AKAP7Q9P0M2 348 aaPredicted RBP10.45□□□□□ -0.74
PDE6C-201ENST00000371447 ATPIF1Q9UII2 106 aa10.45□□□□□ -0.74
PDE6C-201ENST00000371447 HS3ST3B1Q9Y662 390 aa10.45□□□□□ -0.74
PDE6C-201ENST00000371447 FXYD6-FXYD2A0A087WZ82 144 aa10.45□□□□□ -0.74
PDE6C-201ENST00000371447 A0A0G2JMM0 328 aa10.45□□□□□ -0.74
PDE6C-201ENST00000371447 LOC100289279A0A1B0GTE1 492 aa10.45□□□□□ -0.74
PDE6C-201ENST00000371447 A0A1W2PPB8 328 aa10.45□□□□□ -0.74
PDE6C-201ENST00000371447 A0A1W2PQ72 361 aa10.45□□□□□ -0.74
PDE6C-201ENST00000371447 A0A1W2PRS3 328 aa10.45□□□□□ -0.74
PDE6C-201ENST00000371447 KIR3DP1A8MWS1 328 aa10.45□□□□□ -0.74
PDE6C-201ENST00000371447 TNFSF11O14788 317 aa10.45□□□□□ -0.74
PDE6C-201ENST00000371447 IGHG1P01857 330 aa10.45□□□□□ -0.74
PDE6C-201ENST00000371447 UMODP07911 640 aa10.45□□□□□ -0.74
PDE6C-201ENST00000371447 HCKP08631 526 aa10.45□□□□□ -0.74
PDE6C-201ENST00000371447 ZNF20P17024 532 aa10.45□□□□□ -0.74
PDE6C-201ENST00000371447 PTGDSP41222 190 aa10.45□□□□□ -0.74
PDE6C-201ENST00000371447 ATXN7L3Q14CW9 347 aaPredicted RBP10.45□□□□□ -0.74
PDE6C-201ENST00000371447 NLRC3Q7RTR2 1065 aa10.45□□□□□ -0.74
PDE6C-201ENST00000371447 TMEM105Q8N8V8 129 aa10.45□□□□□ -0.74
PDE6C-201ENST00000371447 OR2M3Q8NG83 312 aa10.45□□□□□ -0.74
PDE6C-201ENST00000371447 OR10K1Q8NGX5 313 aa10.45□□□□□ -0.74
PDE6C-201ENST00000371447 PHYHIPQ92561 330 aa10.45□□□□□ -0.74
PDE6C-201ENST00000371447 LIN37Q96GY3 246 aaPredicted RBP10.45□□□□□ -0.74
PDE6C-201ENST00000371447 OR2M2Q96R28 347 aa10.45□□□□□ -0.74
PDE6C-201ENST00000371447 PBOV1Q9GZY1 135 aa10.45□□□□□ -0.74
PDE6C-201ENST00000371447 FXYD6Q9H0Q3 95 aa10.45□□□□□ -0.74
PDE6C-201ENST00000371447 CNTD2Q9H8S5 307 aa10.45□□□□□ -0.74
PDE6C-201ENST00000371447 FBXO4Q9UKT5 387 aa10.45□□□□□ -0.74
PDE6C-201ENST00000371447 DSPP15924 2871 aaKnown RBP10.45□□□□□ -0.74
PDE6C-201ENST00000371447 POM121CA8CG34 1229 aa10.45□□□□□ -0.74
PDE6C-201ENST00000371447 ERVH48-1M5A8F1 160 aa10.45□□□□□ -0.74
PDE6C-201ENST00000371447 TP53I11O14683 189 aa10.45□□□□□ -0.74
PDE6C-201ENST00000371447 XRCC3O43542 346 aa10.45□□□□□ -0.74
PDE6C-201ENST00000371447 MYO7BQ6PIF6 2116 aa10.45□□□□□ -0.74
PDE6C-201ENST00000371447 FIP1L1Q6UN15 594 aaKnown RBP10.45□□□□□ -0.74
PDE6C-201ENST00000371447 RPS19BP1Q86WX3 136 aaKnown RBP10.45□□□□□ -0.74
PDE6C-201ENST00000371447 MISPQ8IVT2 679 aa10.45□□□□□ -0.74
PDE6C-201ENST00000371447 FAM219AQ8IW50 185 aa10.45□□□□□ -0.74
PDE6C-201ENST00000371447 ZNF837Q96EG3 531 aaPredicted RBP10.45□□□□□ -0.74
PDE6C-201ENST00000371447 SELENOIQ9C0D9 397 aa10.45□□□□□ -0.74
PDE6C-201ENST00000371447 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.45□□□□□ -0.74
PDE6C-201ENST00000371447 ARRDC1-AS1Q9H2J1 176 aa10.45□□□□□ -0.74
PDE6C-201ENST00000371447 C1orf198Q9H425 327 aa10.45□□□□□ -0.74
PDE6C-201ENST00000371447 PLEKHA1Q9HB21 404 aa10.45□□□□□ -0.74
PDE6C-201ENST00000371447 ZFP64Q9NPA5 681 aa10.45□□□□□ -0.74
PDE6C-201ENST00000371447 ALKBH4Q9NXW9 302 aa10.45□□□□□ -0.74
PDE6C-201ENST00000371447 LAMA5O15230 3695 aa10.44□□□□□ -0.74
PDE6C-201ENST00000371447 IGLV3-12A0A075B6K2 115 aa10.44□□□□□ -0.74
PDE6C-201ENST00000371447 SLC17A2O00624 439 aa10.44□□□□□ -0.74
PDE6C-201ENST00000371447 ZNF432O94892 652 aa10.44□□□□□ -0.74
PDE6C-201ENST00000371447 DBHP09172 617 aa10.44□□□□□ -0.74
PDE6C-201ENST00000371447 GNB3P16520 340 aa10.44□□□□□ -0.74
PDE6C-201ENST00000371447 PMPCAQ10713 525 aa10.44□□□□□ -0.74
PDE6C-201ENST00000371447 BCL2A1Q16548 175 aa10.44□□□□□ -0.74
PDE6C-201ENST00000371447 C2orf68Q2NKX9 166 aa10.44□□□□□ -0.74
PDE6C-201ENST00000371447 CDNFQ49AH0 187 aa10.44□□□□□ -0.74
PDE6C-201ENST00000371447 AWAT2Q6E213 333 aa10.44□□□□□ -0.74
PDE6C-201ENST00000371447 CARFQ8N187 725 aa10.44□□□□□ -0.74
PDE6C-201ENST00000371447 GALNT16Q8N428 558 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms