RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 A0A0A6YYJ9 748 aa10.74□□□□□ -0.69
DEPDC1-201ENST00000370966 XRCC3O43542 346 aa10.74□□□□□ -0.69
DEPDC1-201ENST00000370966 PRKNO60260 465 aaPredicted RBP10.74□□□□□ -0.69
DEPDC1-201ENST00000370966 B3GALNT1O75752 331 aa10.74□□□□□ -0.69
DEPDC1-201ENST00000370966 PIAS2O75928 621 aa10.74□□□□□ -0.69
DEPDC1-201ENST00000370966 OR2J2O76002 312 aa10.74□□□□□ -0.69
DEPDC1-201ENST00000370966 ABOP16442 354 aa10.74□□□□□ -0.69
DEPDC1-201ENST00000370966 FZD2Q14332 565 aa10.74□□□□□ -0.69
DEPDC1-201ENST00000370966 PLXDC2Q6UX71 529 aa10.74□□□□□ -0.69
DEPDC1-201ENST00000370966 OR5T1Q8NG75 326 aa10.74□□□□□ -0.69
DEPDC1-201ENST00000370966 OR4D6Q8NGJ1 314 aa10.74□□□□□ -0.69
DEPDC1-201ENST00000370966 OTOSQ8NHW6 89 aa10.74□□□□□ -0.69
DEPDC1-201ENST00000370966 RPP25Q9BUL9 199 aaKnown RBP10.74□□□□□ -0.69
DEPDC1-201ENST00000370966 NUDT9Q9BW91 350 aa10.74□□□□□ -0.69
DEPDC1-201ENST00000370966 SLCO1C1Q9NYB5 712 aa10.74□□□□□ -0.69
DEPDC1-201ENST00000370966 ANKUB1A6NFN9 424 aa10.74□□□□□ -0.69
DEPDC1-201ENST00000370966 PRICKLE3O43900 615 aaPredicted RBP10.74□□□□□ -0.69
DEPDC1-201ENST00000370966 TIMM8AO60220 97 aaPredicted RBP10.74□□□□□ -0.69
DEPDC1-201ENST00000370966 SNRNP70P08621 437 aaKnown RBP10.74□□□□□ -0.69
DEPDC1-201ENST00000370966 KIR2DL3P43628 341 aa10.74□□□□□ -0.69
DEPDC1-201ENST00000370966 SHBQ15464 509 aa10.74□□□□□ -0.69
DEPDC1-201ENST00000370966 SSX1Q16384 188 aa10.74□□□□□ -0.69
DEPDC1-201ENST00000370966 PDLIM3Q53GG5 364 aaPredicted RBP10.74□□□□□ -0.69
DEPDC1-201ENST00000370966 Q6ZS52 159 aa10.74□□□□□ -0.69
DEPDC1-201ENST00000370966 YRDCQ86U90 279 aaKnown RBP10.74□□□□□ -0.69
DEPDC1-201ENST00000370966 PLPP5Q8NEB5 264 aa10.74□□□□□ -0.69
DEPDC1-201ENST00000370966 OR5M1Q8NGP8 315 aa10.74□□□□□ -0.69
DEPDC1-201ENST00000370966 TAAR8Q969N4 342 aa10.74□□□□□ -0.69
DEPDC1-201ENST00000370966 MED30Q96HR3 178 aa10.74□□□□□ -0.69
DEPDC1-201ENST00000370966 THOC3Q96J01 351 aaKnown RBP10.74□□□□□ -0.69
DEPDC1-201ENST00000370966 DERL3Q96Q80 235 aa10.74□□□□□ -0.69
DEPDC1-201ENST00000370966 TCEAL2Q9H3H9 227 aaPredicted RBP10.74□□□□□ -0.69
DEPDC1-201ENST00000370966 TAS2R5Q9NYW4 299 aa10.74□□□□□ -0.69
DEPDC1-201ENST00000370966 KIF13BQ9NQT8 1826 aa10.73□□□□□ -0.69
DEPDC1-201ENST00000370966 A8MXE2 369 aa10.73□□□□□ -0.69
DEPDC1-201ENST00000370966 PPT1P50897 306 aa10.73□□□□□ -0.69
DEPDC1-201ENST00000370966 TLE4Q04727 773 aa10.73□□□□□ -0.69
DEPDC1-201ENST00000370966 PCNPQ8WW12 178 aaKnown RBP10.73□□□□□ -0.69
DEPDC1-201ENST00000370966 KCNE4Q8WWG9 221 aa10.73□□□□□ -0.69
DEPDC1-201ENST00000370966 MSI2Q96DH6 328 aaKnown RBP10.73□□□□□ -0.69
DEPDC1-201ENST00000370966 KCNJ15Q99712 375 aa10.73□□□□□ -0.69
DEPDC1-201ENST00000370966 PLA2G2FQ9BZM2 168 aa10.73□□□□□ -0.69
DEPDC1-201ENST00000370966 EXOGQ9Y2C4 368 aaKnown RBP10.73□□□□□ -0.69
DEPDC1-201ENST00000370966 CEP290O15078 2479 aa10.73□□□□□ -0.69
DEPDC1-201ENST00000370966 ST8SIA3O43173 380 aa10.73□□□□□ -0.69
DEPDC1-201ENST00000370966 DHHO43323 396 aa10.73□□□□□ -0.69
DEPDC1-201ENST00000370966 RGS11O94810 467 aa10.73□□□□□ -0.69
DEPDC1-201ENST00000370966 GSTP1P09211 210 aaKnown RBP10.73□□□□□ -0.69
DEPDC1-201ENST00000370966 RBPJQ06330 500 aa10.73□□□□□ -0.69
DEPDC1-201ENST00000370966 SLC25A35Q3KQZ1 300 aa10.73□□□□□ -0.69
DEPDC1-201ENST00000370966 TCTE3Q8IZS6 198 aa10.73□□□□□ -0.69
DEPDC1-201ENST00000370966 ZNF610Q8N9Z0 462 aa10.73□□□□□ -0.69
DEPDC1-201ENST00000370966 OR11L1Q8NGX0 322 aa10.73□□□□□ -0.69
DEPDC1-201ENST00000370966 MARC2Q969Z3 335 aa10.73□□□□□ -0.69
DEPDC1-201ENST00000370966 SPACA9Q96E40 222 aaPredicted RBP10.73□□□□□ -0.69
DEPDC1-201ENST00000370966 PELI1Q96FA3 418 aa10.73□□□□□ -0.69
DEPDC1-201ENST00000370966 NEURL2Q9BR09 285 aa10.73□□□□□ -0.69
DEPDC1-201ENST00000370966 TWSG1Q9GZX9 223 aa10.73□□□□□ -0.69
DEPDC1-201ENST00000370966 PBOV1Q9GZY1 135 aa10.73□□□□□ -0.69
DEPDC1-201ENST00000370966 PIGMQ9H3S5 423 aa10.73□□□□□ -0.69
DEPDC1-201ENST00000370966 EXOSC3Q9NQT5 275 aaKnown RBP10.73□□□□□ -0.69
DEPDC1-201ENST00000370966 DNAJB12Q9NXW2 375 aaKnown RBP10.73□□□□□ -0.69
DEPDC1-201ENST00000370966 GUSBP08236 651 aa10.73□□□□□ -0.69
DEPDC1-201ENST00000370966 ALOX5APP20292 161 aa10.73□□□□□ -0.69
DEPDC1-201ENST00000370966 GABRA2P47869 451 aa10.73□□□□□ -0.69
DEPDC1-201ENST00000370966 NKX6-1P78426 367 aaPredicted RBP10.73□□□□□ -0.69
DEPDC1-201ENST00000370966 MRM1Q6IN84 353 aaKnown RBP10.73□□□□□ -0.69
DEPDC1-201ENST00000370966 RHOUQ7L0Q8 258 aa10.73□□□□□ -0.69
DEPDC1-201ENST00000370966 DND1Q8IYX4 353 aaKnown RBP10.73□□□□□ -0.69
DEPDC1-201ENST00000370966 MFSD4AQ8N468 514 aa10.73□□□□□ -0.69
DEPDC1-201ENST00000370966 ARHGEF39Q8N4T4 335 aa10.73□□□□□ -0.69
DEPDC1-201ENST00000370966 SLC38A9Q8NBW4 561 aa10.73□□□□□ -0.69
DEPDC1-201ENST00000370966 EMG1Q92979 244 aaKnown RBP10.73□□□□□ -0.69
DEPDC1-201ENST00000370966 RNF170Q96K19 258 aa10.73□□□□□ -0.69
DEPDC1-201ENST00000370966 C20orf141Q9NUB4 165 aa10.73□□□□□ -0.69
DEPDC1-201ENST00000370966 KLF13Q9Y2Y9 288 aaPredicted RBP10.73□□□□□ -0.69
DEPDC1-201ENST00000370966 TRIP12Q14669 1992 aaPredicted RBP10.73□□□□□ -0.69
DEPDC1-201ENST00000370966 FAM186AA6NE01 2351 aa10.73□□□□□ -0.69
DEPDC1-201ENST00000370966 ANKRD31Q8N7Z5 1873 aa10.72□□□□□ -0.69
DEPDC1-201ENST00000370966 A0A0B4J203 849 aa10.72□□□□□ -0.69
DEPDC1-201ENST00000370966 F10P00742 488 aa10.72□□□□□ -0.69
DEPDC1-201ENST00000370966 OMGP23515 440 aa10.72□□□□□ -0.69
DEPDC1-201ENST00000370966 GPNMBQ14956 572 aa10.72□□□□□ -0.69
DEPDC1-201ENST00000370966 TBC1D28Q2M2D7 210 aa10.72□□□□□ -0.69
DEPDC1-201ENST00000370966 ACOT7LQ6ZUV0 252 aa10.72□□□□□ -0.69
DEPDC1-201ENST00000370966 OR2AK2Q8NG84 335 aa10.72□□□□□ -0.69
DEPDC1-201ENST00000370966 UCN3Q969E3 161 aa10.72□□□□□ -0.69
DEPDC1-201ENST00000370966 UQCC2Q9BRT2 126 aa10.72□□□□□ -0.69
DEPDC1-201ENST00000370966 TCEAL7Q9BRU2 100 aa10.72□□□□□ -0.69
DEPDC1-201ENST00000370966 BARHL1Q9BZE3 327 aa10.72□□□□□ -0.69
DEPDC1-201ENST00000370966 FOXJ3Q9UPW0 622 aa10.72□□□□□ -0.69
DEPDC1-201ENST00000370966 COL11A2P13942 1736 aaPredicted RBP10.72□□□□□ -0.69
DEPDC1-201ENST00000370966 OR2W5A6NFC9 320 aa10.72□□□□□ -0.69
DEPDC1-201ENST00000370966 CBR3O75828 277 aa10.72□□□□□ -0.69
DEPDC1-201ENST00000370966 CD3DP04234 171 aa10.72□□□□□ -0.69
DEPDC1-201ENST00000370966 NME2P22392 152 aa10.72□□□□□ -0.69
DEPDC1-201ENST00000370966 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.72□□□□□ -0.69
DEPDC1-201ENST00000370966 ZNF674Q2M3X9 581 aa10.72□□□□□ -0.69
DEPDC1-201ENST00000370966 TFAP2EQ6VUC0 442 aa10.72□□□□□ -0.69
DEPDC1-201ENST00000370966 APH1BQ8WW43 257 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms