RNA–Protein interactions for RNA: ENST00000370361.5

VMA21-202, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 5 BASIC

Gene VMA21, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-202ENST00000370361 C1orf229Q6ZS94 237 aaPredicted RBP13.64□□□□□ -0.23
VMA21-202ENST00000370361 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.64□□□□□ -0.23
VMA21-202ENST00000370361 OR13G1Q8NGZ3 307 aa13.64□□□□□ -0.23
VMA21-202ENST00000370361 MCUR1Q96AQ8 359 aa13.64□□□□□ -0.23
VMA21-202ENST00000370361 CMBLQ96DG6 245 aa13.64□□□□□ -0.23
VMA21-202ENST00000370361 CDRT15Q96T59 188 aa13.64□□□□□ -0.23
VMA21-202ENST00000370361 C7orf69Q9H7B7 122 aa13.64□□□□□ -0.23
VMA21-202ENST00000370361 UBAP1Q9NZ09 502 aa13.64□□□□□ -0.23
VMA21-202ENST00000370361 PPP1R3CQ9UQK1 317 aa13.64□□□□□ -0.23
VMA21-202ENST00000370361 COA3Q9Y2R0 106 aaPredicted RBP13.64□□□□□ -0.23
VMA21-202ENST00000370361 WNK2Q9Y3S1 2297 aa13.64□□□□□ -0.23
VMA21-202ENST00000370361 A8MXK9 166 aa13.63□□□□□ -0.23
VMA21-202ENST00000370361 SOCS2O14508 198 aa13.63□□□□□ -0.23
VMA21-202ENST00000370361 RENP00797 406 aa13.63□□□□□ -0.23
VMA21-202ENST00000370361 SCG5P05408 212 aa13.63□□□□□ -0.23
VMA21-202ENST00000370361 MDH2P40926 338 aaKnown RBP13.63□□□□□ -0.23
VMA21-202ENST00000370361 COX10Q12887 443 aa13.63□□□□□ -0.23
VMA21-202ENST00000370361 SLC36A3Q495N2 470 aa13.63□□□□□ -0.23
VMA21-202ENST00000370361 SAMD4BQ5PRF9 694 aaKnown RBP13.63□□□□□ -0.23
VMA21-202ENST00000370361 C16orf89Q6UX73 402 aa13.63□□□□□ -0.23
VMA21-202ENST00000370361 JAZF1Q86VZ6 243 aa13.63□□□□□ -0.23
VMA21-202ENST00000370361 LRRC28Q86X40 367 aaPredicted RBP13.63□□□□□ -0.23
VMA21-202ENST00000370361 FAM86B1Q8N7N1 296 aa13.63□□□□□ -0.23
VMA21-202ENST00000370361 NUAK2Q9H093 628 aa13.63□□□□□ -0.23
VMA21-202ENST00000370361 ZMAT3Q9HA38 289 aaKnown RBP13.63□□□□□ -0.23
VMA21-202ENST00000370361 PATZ1Q9HBE1 687 aaKnown RBP13.63□□□□□ -0.23
VMA21-202ENST00000370361 NDE1Q9NXR1 346 aa13.63□□□□□ -0.23
VMA21-202ENST00000370361 KCNG2Q9UJ96 466 aa13.63□□□□□ -0.23
VMA21-202ENST00000370361 STARD10Q9Y365 291 aa13.63□□□□□ -0.23
VMA21-202ENST00000370361 IER3IP1Q9Y5U9 82 aa13.63□□□□□ -0.23
VMA21-202ENST00000370361 TRBV4-1A0A0J9YWV2 114 aa13.62□□□□□ -0.23
VMA21-202ENST00000370361 FSHBP01225 129 aa13.62□□□□□ -0.23
VMA21-202ENST00000370361 FPR3P25089 353 aa13.62□□□□□ -0.23
VMA21-202ENST00000370361 SRP9P49458 86 aaKnown RBP13.62□□□□□ -0.23
VMA21-202ENST00000370361 MNAT1P51948 309 aa13.62□□□□□ -0.23
VMA21-202ENST00000370361 HIST1H3AP68431 136 aa13.62□□□□□ -0.23
VMA21-202ENST00000370361 ZNF181Q2M3W8 571 aa13.62□□□□□ -0.23
VMA21-202ENST00000370361 RFX4Q33E94 735 aa13.62□□□□□ -0.23
VMA21-202ENST00000370361 CCDC92Q53HC0 331 aaPredicted RBP13.62□□□□□ -0.23
VMA21-202ENST00000370361 ESCO2Q56NI9 601 aa13.62□□□□□ -0.23
VMA21-202ENST00000370361 HIST2H3PS2Q5TEC6 136 aa13.62□□□□□ -0.23
VMA21-202ENST00000370361 RPL13AP3Q6NVV1 102 aa13.62□□□□□ -0.23
VMA21-202ENST00000370361 THSD4Q6ZMP0 1018 aa13.62□□□□□ -0.23
VMA21-202ENST00000370361 HIST2H3AQ71DI3 136 aa13.62□□□□□ -0.23
VMA21-202ENST00000370361 DEFB107AQ8IZN7 70 aa13.62□□□□□ -0.23
VMA21-202ENST00000370361 C1orf87Q8N0U7 546 aa13.62□□□□□ -0.23
VMA21-202ENST00000370361 CCDC197Q8NCU1 140 aa13.62□□□□□ -0.23
VMA21-202ENST00000370361 OR8G5Q8NG78 346 aa13.62□□□□□ -0.23
VMA21-202ENST00000370361 FANK1Q8TC84 345 aa13.62□□□□□ -0.23
VMA21-202ENST00000370361 PYURFQ96I23 114 aa13.62□□□□□ -0.23
VMA21-202ENST00000370361 ZNF582Q96NG8 517 aaPredicted RBP13.62□□□□□ -0.23
VMA21-202ENST00000370361 GPA33Q99795 319 aa13.62□□□□□ -0.23
VMA21-202ENST00000370361 FUZQ9BT04 418 aa13.62□□□□□ -0.23
VMA21-202ENST00000370361 RERGLQ9H628 205 aa13.62□□□□□ -0.23
VMA21-202ENST00000370361 IL20RAQ9UHF4 553 aa13.62□□□□□ -0.23
VMA21-202ENST00000370361 LRCH1Q9Y2L9 728 aa13.62□□□□□ -0.23
VMA21-202ENST00000370361 NOP16Q9Y3C1 178 aaKnown RBP13.62□□□□□ -0.23
VMA21-202ENST00000370361 DYSFO75923 2080 aa13.62□□□□□ -0.23
VMA21-202ENST00000370361 TMEM89A2RUT3 159 aa13.61□□□□□ -0.23
VMA21-202ENST00000370361 LRRC30A6NM36 301 aa13.61□□□□□ -0.23
VMA21-202ENST00000370361 RER1O15258 196 aa13.61□□□□□ -0.23
VMA21-202ENST00000370361 GADD45GO95257 159 aa13.61□□□□□ -0.23
VMA21-202ENST00000370361 AVPP01185 164 aa13.61□□□□□ -0.23
VMA21-202ENST00000370361 SEMG1P04279 462 aa13.61□□□□□ -0.23
VMA21-202ENST00000370361 SBK2P0C263 348 aa13.61□□□□□ -0.23
VMA21-202ENST00000370361 PPIAL4GP0DN37 164 aa13.61□□□□□ -0.23
VMA21-202ENST00000370361 NOS3P29474 1203 aa13.61□□□□□ -0.23
VMA21-202ENST00000370361 MSX2P35548 267 aaPredicted RBP13.61□□□□□ -0.23
VMA21-202ENST00000370361 LCN2P80188 198 aa13.61□□□□□ -0.23
VMA21-202ENST00000370361 MXRA7P84157 204 aa13.61□□□□□ -0.23
VMA21-202ENST00000370361 RBMS3Q6XE24 437 aaKnown RBP13.61□□□□□ -0.23
VMA21-202ENST00000370361 Q6ZR03 302 aa13.61□□□□□ -0.23
VMA21-202ENST00000370361 PTCHD4Q6ZW05 846 aa13.61□□□□□ -0.23
VMA21-202ENST00000370361 CELF2-AS1Q8N7Q2 184 aa13.61□□□□□ -0.23
VMA21-202ENST00000370361 GCDHQ92947 438 aaPredicted RBP13.61□□□□□ -0.23
VMA21-202ENST00000370361 ERGIC1Q969X5 290 aa13.61□□□□□ -0.23
VMA21-202ENST00000370361 NSL1Q96IY1 281 aa13.61□□□□□ -0.23
VMA21-202ENST00000370361 ERMAPQ96PL5 475 aaPredicted RBP13.61□□□□□ -0.23
VMA21-202ENST00000370361 OR2V2Q96R30 315 aa13.61□□□□□ -0.23
VMA21-202ENST00000370361 MRI1Q9BV20 369 aa13.61□□□□□ -0.23
VMA21-202ENST00000370361 HCAR1Q9BXC0 346 aa13.61□□□□□ -0.23
VMA21-202ENST00000370361 IGLV1-36A0A0B4J1U3 117 aa13.6□□□□□ -0.23
VMA21-202ENST00000370361 A0A1B0GWJ7 208 aa13.6□□□□□ -0.23
VMA21-202ENST00000370361 IQCF6A8MYZ5 107 aa13.6□□□□□ -0.23
VMA21-202ENST00000370361 F5H0A9 414 aaPredicted RBP13.6□□□□□ -0.23
VMA21-202ENST00000370361 TMEM178BH3BS89 294 aa13.6□□□□□ -0.23
VMA21-202ENST00000370361 ARPC2O15144 300 aa13.6□□□□□ -0.23
VMA21-202ENST00000370361 CDKN2AP42771 156 aaKnown RBP13.6□□□□□ -0.23
VMA21-202ENST00000370361 SLC6A9P48067 706 aa13.6□□□□□ -0.23
VMA21-202ENST00000370361 FXYD6P3P58550 94 aa13.6□□□□□ -0.23
VMA21-202ENST00000370361 SEC23BQ15437 767 aa13.6□□□□□ -0.23
VMA21-202ENST00000370361 ARMCX4Q5H9R4 360 aa13.6□□□□□ -0.23
VMA21-202ENST00000370361 COLCA1Q6ZS62 124 aa13.6□□□□□ -0.23
VMA21-202ENST00000370361 ZBTB46Q86UZ6 589 aa13.6□□□□□ -0.23
VMA21-202ENST00000370361 LINC00471Q8N535 108 aa13.6□□□□□ -0.23
VMA21-202ENST00000370361 ATG16L2Q8NAA4 619 aa13.6□□□□□ -0.23
VMA21-202ENST00000370361 ITLN1Q8WWA0 313 aa13.6□□□□□ -0.23
VMA21-202ENST00000370361 SIGLEC11Q96RL6 698 aa13.6□□□□□ -0.23
VMA21-202ENST00000370361 SLC22A4Q9H015 551 aa13.6□□□□□ -0.23
VMA21-202ENST00000370361 OR52D1Q9H346 318 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms