RNA–Protein interactions for RNA: ENST00000369592.1

SMNDC1-201, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMNDC1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-201ENST00000369592 HPS1Q92902 700 aa17.48■□□□□ 0.39
SMNDC1-201ENST00000369592 SLCO4A1Q96BD0 722 aa17.48■□□□□ 0.39
SMNDC1-201ENST00000369592 DCLRE1CQ96SD1 692 aaKnown RBP17.48■□□□□ 0.39
SMNDC1-201ENST00000369592 FEVQ99581 238 aa17.48■□□□□ 0.39
SMNDC1-201ENST00000369592 TSSK6Q9BXA6 273 aa17.48■□□□□ 0.39
SMNDC1-201ENST00000369592 HDHD2Q9H0R4 259 aa17.48■□□□□ 0.39
SMNDC1-201ENST00000369592 ZNF275Q9NSD4 429 aaPredicted RBP17.48■□□□□ 0.39
SMNDC1-201ENST00000369592 BAIAP2Q9UQB8 552 aa17.48■□□□□ 0.39
SMNDC1-201ENST00000369592 LRP5LA4QPB2 252 aa17.47■□□□□ 0.39
SMNDC1-201ENST00000369592 IGHV1-46P01743 117 aa17.47■□□□□ 0.39
SMNDC1-201ENST00000369592 KITLGP21583 273 aa17.47■□□□□ 0.39
SMNDC1-201ENST00000369592 IL2RGP31785 369 aa17.47■□□□□ 0.39
SMNDC1-201ENST00000369592 CRYBB2P43320 205 aa17.47■□□□□ 0.39
SMNDC1-201ENST00000369592 CCL8P80075 99 aa17.47■□□□□ 0.39
SMNDC1-201ENST00000369592 FAM209AQ5JX71 171 aa17.47■□□□□ 0.39
SMNDC1-201ENST00000369592 TMEM154Q6P9G4 183 aa17.47■□□□□ 0.39
SMNDC1-201ENST00000369592 CFAP77Q6ZQR2 320 aa17.47■□□□□ 0.39
SMNDC1-201ENST00000369592 CYB561A3Q8NBI2 242 aa17.47■□□□□ 0.39
SMNDC1-201ENST00000369592 GIPC3Q8TF64 312 aa17.47■□□□□ 0.39
SMNDC1-201ENST00000369592 SNX33Q8WV41 574 aa17.47■□□□□ 0.39
SMNDC1-201ENST00000369592 CGGBP1Q9UFW8 167 aaPredicted RBP17.47■□□□□ 0.39
SMNDC1-201ENST00000369592 CD55P08174 381 aa17.46■□□□□ 0.39
SMNDC1-201ENST00000369592 PSKH1P11801 424 aa17.46■□□□□ 0.39
SMNDC1-201ENST00000369592 ZNF16P17020 682 aaPredicted RBP17.46■□□□□ 0.39
SMNDC1-201ENST00000369592 LIPAP38571 399 aa17.46■□□□□ 0.39
SMNDC1-201ENST00000369592 ZNF81P51508 661 aa17.46■□□□□ 0.39
SMNDC1-201ENST00000369592 SLC25A1P53007 311 aa17.46■□□□□ 0.39
SMNDC1-201ENST00000369592 FLOT2Q14254 428 aa17.46■□□□□ 0.39
SMNDC1-201ENST00000369592 PCK2Q16822 640 aa17.46■□□□□ 0.39
SMNDC1-201ENST00000369592 SLC36A3Q495N2 470 aa17.46■□□□□ 0.39
SMNDC1-201ENST00000369592 HAVCR1Q96D42 359 aa17.46■□□□□ 0.39
SMNDC1-201ENST00000369592 CYSLTR2Q9NS75 346 aa17.46■□□□□ 0.39
SMNDC1-201ENST00000369592 TBC1D23Q9NUY8 699 aa17.46■□□□□ 0.39
SMNDC1-201ENST00000369592 ARMC1Q9NVT9 282 aa17.46■□□□□ 0.39
SMNDC1-201ENST00000369592 KCNG2Q9UJ96 466 aa17.46■□□□□ 0.39
SMNDC1-201ENST00000369592 GRIP1Q9Y3R0 1128 aa17.46■□□□□ 0.39
SMNDC1-201ENST00000369592 FBN1P35555 2871 aaKnown RBP17.46■□□□□ 0.38
SMNDC1-201ENST00000369592 SOX14O95416 240 aa17.45■□□□□ 0.38
SMNDC1-201ENST00000369592 PYCR1P32322 319 aa17.45■□□□□ 0.38
SMNDC1-201ENST00000369592 CENPAP49450 140 aa17.45■□□□□ 0.38
SMNDC1-201ENST00000369592 RGS6P49758 472 aa17.45■□□□□ 0.38
SMNDC1-201ENST00000369592 CHN2P52757 468 aa17.45■□□□□ 0.38
SMNDC1-201ENST00000369592 CDK5R2Q13319 367 aa17.45■□□□□ 0.38
SMNDC1-201ENST00000369592 CRMP1Q14194 572 aa17.45■□□□□ 0.38
SMNDC1-201ENST00000369592 FBXW12Q6X9E4 464 aa17.45■□□□□ 0.38
SMNDC1-201ENST00000369592 Q6ZR03 302 aa17.45■□□□□ 0.38
SMNDC1-201ENST00000369592 OR2T33Q8NG76 320 aa17.45■□□□□ 0.38
SMNDC1-201ENST00000369592 OR10S1Q8NGN2 331 aa17.45■□□□□ 0.38
SMNDC1-201ENST00000369592 OR2T4Q8NH00 348 aa17.45■□□□□ 0.38
SMNDC1-201ENST00000369592 MAP6Q96JE9 813 aa17.45■□□□□ 0.38
SMNDC1-201ENST00000369592 NTN4Q9HB63 628 aa17.45■□□□□ 0.38
SMNDC1-201ENST00000369592 PURGQ9UJV8 347 aaKnown RBP17.45■□□□□ 0.38
SMNDC1-201ENST00000369592 CUBNO60494 3623 aa17.45■□□□□ 0.38
SMNDC1-201ENST00000369592 MXRA5Q9NR99 2828 aa17.44■□□□□ 0.38
SMNDC1-201ENST00000369592 WNT9BO14905 357 aa17.44■□□□□ 0.38
SMNDC1-201ENST00000369592 FKBP6O75344 327 aa17.44■□□□□ 0.38
SMNDC1-201ENST00000369592 MT-ND5P03915 603 aa17.44■□□□□ 0.38
SMNDC1-201ENST00000369592 SPRNQ5BIV9 151 aa17.44■□□□□ 0.38
SMNDC1-201ENST00000369592 LINC01590Q5TEZ4 76 aa17.44■□□□□ 0.38
SMNDC1-201ENST00000369592 LINC00346Q8IVM7 164 aa17.44■□□□□ 0.38
SMNDC1-201ENST00000369592 PTP4A1Q93096 173 aa17.44■□□□□ 0.38
SMNDC1-201ENST00000369592 COG8Q96MW5 612 aa17.44■□□□□ 0.38
SMNDC1-201ENST00000369592 C1QTNF5Q9BXJ0 243 aa17.44■□□□□ 0.38
SMNDC1-201ENST00000369592 CMC2Q9NRP2 79 aa17.44■□□□□ 0.38
SMNDC1-201ENST00000369592 POLR1DQ9Y2S0 133 aa17.44■□□□□ 0.38
SMNDC1-201ENST00000369592 DYSFO75923 2080 aa17.43■□□□□ 0.38
SMNDC1-201ENST00000369592 ACSM4P0C7M7 580 aa17.43■□□□□ 0.38
SMNDC1-201ENST00000369592 RAC2P15153 192 aa17.43■□□□□ 0.38
SMNDC1-201ENST00000369592 GPR6P46095 362 aaPredicted RBP17.43■□□□□ 0.38
SMNDC1-201ENST00000369592 ERFP50548 548 aa17.43■□□□□ 0.38
SMNDC1-201ENST00000369592 ECH1Q13011 328 aa17.43■□□□□ 0.38
SMNDC1-201ENST00000369592 LYPD4Q6UWN0 246 aa17.43■□□□□ 0.38
SMNDC1-201ENST00000369592 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.43■□□□□ 0.38
SMNDC1-201ENST00000369592 SPATA24Q86W54 205 aa17.43■□□□□ 0.38
SMNDC1-201ENST00000369592 HS3ST5Q8IZT8 346 aa17.43■□□□□ 0.38
SMNDC1-201ENST00000369592 APOBEC3DQ96AK3 386 aaPredicted RBP17.43■□□□□ 0.38
SMNDC1-201ENST00000369592 CMBLQ96DG6 245 aa17.43■□□□□ 0.38
SMNDC1-201ENST00000369592 DIRC2Q96SL1 478 aa17.43■□□□□ 0.38
SMNDC1-201ENST00000369592 DDX28Q9NUL7 540 aaKnown RBP17.43■□□□□ 0.38
SMNDC1-201ENST00000369592 DNAJB9Q9UBS3 223 aa17.43■□□□□ 0.38
SMNDC1-201ENST00000369592 ZDHHC8Q9ULC8 765 aa17.43■□□□□ 0.38
SMNDC1-201ENST00000369592 CACNG2Q9Y698 323 aa17.43■□□□□ 0.38
SMNDC1-201ENST00000369592 IGHV1-69-2A0A0G2JMI3 117 aa17.42■□□□□ 0.38
SMNDC1-201ENST00000369592 LOC100289279A0A1B0GTE1 492 aa17.42■□□□□ 0.38
SMNDC1-201ENST00000369592 A0A1B0GWJ7 208 aa17.42■□□□□ 0.38
SMNDC1-201ENST00000369592 SPRY3O43610 288 aa17.42■□□□□ 0.38
SMNDC1-201ENST00000369592 LMX1BO60663 402 aa17.42■□□□□ 0.38
SMNDC1-201ENST00000369592 SPI1P17947 270 aa17.42■□□□□ 0.38
SMNDC1-201ENST00000369592 IGFBP5P24593 272 aa17.42■□□□□ 0.38
SMNDC1-201ENST00000369592 OTX1P32242 354 aaPredicted RBP17.42■□□□□ 0.38
SMNDC1-201ENST00000369592 GRK5P34947 590 aa17.42■□□□□ 0.38
SMNDC1-201ENST00000369592 CDH15P55291 814 aa17.42■□□□□ 0.38
SMNDC1-201ENST00000369592 LMO4P61968 165 aa17.42■□□□□ 0.38
SMNDC1-201ENST00000369592 CBX1P83916 185 aa17.42■□□□□ 0.38
SMNDC1-201ENST00000369592 TSTQ16762 297 aaKnown RBP17.42■□□□□ 0.38
SMNDC1-201ENST00000369592 TEX30Q5JUR7 227 aa17.42■□□□□ 0.38
SMNDC1-201ENST00000369592 USP51Q70EK9 711 aa17.42■□□□□ 0.38
SMNDC1-201ENST00000369592 OR9Q1Q8NGQ5 310 aa17.42■□□□□ 0.38
SMNDC1-201ENST00000369592 CLDND2Q8NHS1 167 aa17.42■□□□□ 0.38
SMNDC1-201ENST00000369592 UTP4Q969X6 686 aaKnown RBP17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms