RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 TBC1D23Q9NUY8 699 aa16.12■□□□□ 0.17
CKS1B-203ENST00000368439 ARMC1Q9NVT9 282 aa16.12■□□□□ 0.17
CKS1B-203ENST00000368439 CYB5R1Q9UHQ9 305 aa16.12■□□□□ 0.17
CKS1B-203ENST00000368439 POLR1DQ9Y2S0 133 aa16.12■□□□□ 0.17
CKS1B-203ENST00000368439 TCRBV3S1A0A5B6 114 aa16.11■□□□□ 0.17
CKS1B-203ENST00000368439 ARRDC5A6NEK1 342 aa16.11■□□□□ 0.17
CKS1B-203ENST00000368439 KIAA1324LA8MWY0 1029 aaPredicted RBP16.11■□□□□ 0.17
CKS1B-203ENST00000368439 WNT9BO14905 357 aa16.11■□□□□ 0.17
CKS1B-203ENST00000368439 DNAJC8O75937 253 aaPredicted RBP16.11■□□□□ 0.17
CKS1B-203ENST00000368439 SOX14O95416 240 aa16.11■□□□□ 0.17
CKS1B-203ENST00000368439 MT-ND5P03915 603 aa16.11■□□□□ 0.17
CKS1B-203ENST00000368439 PYCR1P32322 319 aa16.11■□□□□ 0.17
CKS1B-203ENST00000368439 GPR6P46095 362 aaPredicted RBP16.11■□□□□ 0.17
CKS1B-203ENST00000368439 TSTQ16762 297 aaKnown RBP16.11■□□□□ 0.17
CKS1B-203ENST00000368439 GIPC3Q8TF64 312 aa16.11■□□□□ 0.17
CKS1B-203ENST00000368439 FEVQ99581 238 aa16.11■□□□□ 0.17
CKS1B-203ENST00000368439 NMNAT2Q9BZQ4 307 aa16.11■□□□□ 0.17
CKS1B-203ENST00000368439 HDHD2Q9H0R4 259 aa16.11■□□□□ 0.17
CKS1B-203ENST00000368439 CYSLTR2Q9NS75 346 aa16.11■□□□□ 0.17
CKS1B-203ENST00000368439 LOC100289279A0A1B0GTE1 492 aa16.1■□□□□ 0.17
CKS1B-203ENST00000368439 J3QW42 95 aa16.1■□□□□ 0.17
CKS1B-203ENST00000368439 GSC2O15499 205 aa16.1■□□□□ 0.17
CKS1B-203ENST00000368439 SPRY3O43610 288 aa16.1■□□□□ 0.17
CKS1B-203ENST00000368439 LMX1BO60663 402 aa16.1■□□□□ 0.17
CKS1B-203ENST00000368439 CDC14BO60729 498 aa16.1■□□□□ 0.17
CKS1B-203ENST00000368439 PSKH1P11801 424 aa16.1■□□□□ 0.17
CKS1B-203ENST00000368439 KITLGP21583 273 aa16.1■□□□□ 0.17
CKS1B-203ENST00000368439 IGFBP5P24593 272 aa16.1■□□□□ 0.17
CKS1B-203ENST00000368439 LIPAP38571 399 aa16.1■□□□□ 0.17
CKS1B-203ENST00000368439 ERFP50548 548 aa16.1■□□□□ 0.17
CKS1B-203ENST00000368439 FLOT2Q14254 428 aa16.1■□□□□ 0.17
CKS1B-203ENST00000368439 SLC36A3Q495N2 470 aa16.1■□□□□ 0.17
CKS1B-203ENST00000368439 SPRNQ5BIV9 151 aa16.1■□□□□ 0.17
CKS1B-203ENST00000368439 FAM209AQ5JX71 171 aa16.1■□□□□ 0.17
CKS1B-203ENST00000368439 PAPD5Q8NDF8 572 aaKnown RBP16.1■□□□□ 0.17
CKS1B-203ENST00000368439 SLCO4A1Q96BD0 722 aa16.1■□□□□ 0.17
CKS1B-203ENST00000368439 HAVCR1Q96D42 359 aa16.1■□□□□ 0.17
CKS1B-203ENST00000368439 CMBLQ96DG6 245 aa16.1■□□□□ 0.17
CKS1B-203ENST00000368439 CGGBP1Q9UFW8 167 aaPredicted RBP16.1■□□□□ 0.17
CKS1B-203ENST00000368439 PURGQ9UJV8 347 aaKnown RBP16.1■□□□□ 0.17
CKS1B-203ENST00000368439 BAIAP2Q9UQB8 552 aa16.1■□□□□ 0.17
CKS1B-203ENST00000368439 CACNG2Q9Y698 323 aa16.1■□□□□ 0.17
CKS1B-203ENST00000368439 IGHV1-69-2A0A0G2JMI3 117 aa16.09■□□□□ 0.17
CKS1B-203ENST00000368439 PLSCR5A0PG75 271 aa16.09■□□□□ 0.17
CKS1B-203ENST00000368439 CD55P08174 381 aa16.09■□□□□ 0.17
CKS1B-203ENST00000368439 HOXB6P17509 224 aaKnown RBP16.09■□□□□ 0.17
CKS1B-203ENST00000368439 RGS6P49758 472 aa16.09■□□□□ 0.17
CKS1B-203ENST00000368439 CDK5R2Q13319 367 aa16.09■□□□□ 0.17
CKS1B-203ENST00000368439 CRMP1Q14194 572 aa16.09■□□□□ 0.17
CKS1B-203ENST00000368439 FAM166AQ6J272 317 aa16.09■□□□□ 0.17
CKS1B-203ENST00000368439 LYPD4Q6UWN0 246 aa16.09■□□□□ 0.17
CKS1B-203ENST00000368439 Q6ZR03 302 aa16.09■□□□□ 0.17
CKS1B-203ENST00000368439 COLCA1Q6ZS62 124 aa16.09■□□□□ 0.17
CKS1B-203ENST00000368439 USP51Q70EK9 711 aa16.09■□□□□ 0.17
CKS1B-203ENST00000368439 OR2T33Q8NG76 320 aa16.09■□□□□ 0.17
CKS1B-203ENST00000368439 OR10S1Q8NGN2 331 aa16.09■□□□□ 0.17
CKS1B-203ENST00000368439 OR2T4Q8NH00 348 aa16.09■□□□□ 0.17
CKS1B-203ENST00000368439 CLDND2Q8NHS1 167 aa16.09■□□□□ 0.17
CKS1B-203ENST00000368439 PTP4A1Q93096 173 aa16.09■□□□□ 0.17
CKS1B-203ENST00000368439 MAP6Q96JE9 813 aa16.09■□□□□ 0.17
CKS1B-203ENST00000368439 COG8Q96MW5 612 aa16.09■□□□□ 0.17
CKS1B-203ENST00000368439 SAP30LQ9HAJ7 183 aa16.09■□□□□ 0.17
CKS1B-203ENST00000368439 MSL2Q9HCI7 577 aa16.09■□□□□ 0.17
CKS1B-203ENST00000368439 DECR2Q9NUI1 292 aa16.09■□□□□ 0.17
CKS1B-203ENST00000368439 ZDHHC8Q9ULC8 765 aa16.09■□□□□ 0.17
CKS1B-203ENST00000368439 TVP23AA6NH52 213 aa16.08■□□□□ 0.16
CKS1B-203ENST00000368439 PPIHO43447 177 aaKnown RBP16.08■□□□□ 0.16
CKS1B-203ENST00000368439 TIMM8AO60220 97 aaPredicted RBP16.08■□□□□ 0.16
CKS1B-203ENST00000368439 FKBP6O75344 327 aa16.08■□□□□ 0.16
CKS1B-203ENST00000368439 TGFAP01135 160 aa16.08■□□□□ 0.16
CKS1B-203ENST00000368439 HLA-DQA2P01906 255 aa16.08■□□□□ 0.16
CKS1B-203ENST00000368439 CDH15P55291 814 aa16.08■□□□□ 0.16
CKS1B-203ENST00000368439 CHRFAM7AQ494W8 412 aa16.08■□□□□ 0.16
CKS1B-203ENST00000368439 FBXW12Q6X9E4 464 aa16.08■□□□□ 0.16
CKS1B-203ENST00000368439 SPATA24Q86W54 205 aa16.08■□□□□ 0.16
CKS1B-203ENST00000368439 HS3ST5Q8IZT8 346 aa16.08■□□□□ 0.16
CKS1B-203ENST00000368439 PROKR2Q8NFJ6 384 aa16.08■□□□□ 0.16
CKS1B-203ENST00000368439 OR51L1Q8NGJ5 315 aa16.08■□□□□ 0.16
CKS1B-203ENST00000368439 OR9Q1Q8NGQ5 310 aa16.08■□□□□ 0.16
CKS1B-203ENST00000368439 PDP1Q9P0J1 537 aaPredicted RBP16.08■□□□□ 0.16
CKS1B-203ENST00000368439 KCNG2Q9UJ96 466 aa16.08■□□□□ 0.16
CKS1B-203ENST00000368439 DYSFO75923 2080 aa16.07■□□□□ 0.16
CKS1B-203ENST00000368439 ACSM4P0C7M7 580 aa16.07■□□□□ 0.16
CKS1B-203ENST00000368439 CLUP10909 449 aa16.07■□□□□ 0.16
CKS1B-203ENST00000368439 RAC2P15153 192 aa16.07■□□□□ 0.16
CKS1B-203ENST00000368439 RPS27P42677 84 aaKnown RBP16.07■□□□□ 0.16
CKS1B-203ENST00000368439 SLC25A1P53007 311 aa16.07■□□□□ 0.16
CKS1B-203ENST00000368439 LMO4P61968 165 aa16.07■□□□□ 0.16
CKS1B-203ENST00000368439 CBX1P83916 185 aa16.07■□□□□ 0.16
CKS1B-203ENST00000368439 CCNIQ14094 377 aa16.07■□□□□ 0.16
CKS1B-203ENST00000368439 HLXQ14774 488 aaPredicted RBP16.07■□□□□ 0.16
CKS1B-203ENST00000368439 PCK2Q16822 640 aa16.07■□□□□ 0.16
CKS1B-203ENST00000368439 OR2AJ1Q8NGZ0 328 aa16.07■□□□□ 0.16
CKS1B-203ENST00000368439 APOBEC3DQ96AK3 386 aaPredicted RBP16.07■□□□□ 0.16
CKS1B-203ENST00000368439 DIRC2Q96SL1 478 aa16.07■□□□□ 0.16
CKS1B-203ENST00000368439 ATF6BQ99941 703 aa16.07■□□□□ 0.16
CKS1B-203ENST00000368439 CDADC1Q9BWV3 514 aa16.07■□□□□ 0.16
CKS1B-203ENST00000368439 C1QTNF5Q9BXJ0 243 aa16.07■□□□□ 0.16
CKS1B-203ENST00000368439 WDR76Q9H967 626 aa16.07■□□□□ 0.16
CKS1B-203ENST00000368439 CMC2Q9NRP2 79 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms