RNA–Protein interactions for RNA: ENST00000368361.8

CLK2-203, Transcript of CDC like kinase 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLK2, Length 2,166 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-203ENST00000368361 CGGBP1Q9UFW8 167 aaPredicted RBP22.04■■□□□ 1.12
CLK2-203ENST00000368361 RCE1Q9Y256 329 aa22.04■■□□□ 1.12
CLK2-203ENST00000368361 DCDC2BA2VCK2 349 aa22.03■■□□□ 1.12
CLK2-203ENST00000368361 SMAD9O15198 467 aaKnown RBP22.03■■□□□ 1.12
CLK2-203ENST00000368361 TRAPPC6AO75865 159 aa22.03■■□□□ 1.12
CLK2-203ENST00000368361 SELENOPP49908 381 aa22.03■■□□□ 1.12
CLK2-203ENST00000368361 CD83Q01151 205 aa22.03■■□□□ 1.12
CLK2-203ENST00000368361 WIPI1Q5MNZ9 446 aaPredicted RBP22.03■■□□□ 1.12
CLK2-203ENST00000368361 GLYATL3Q5SZD4 288 aa22.03■■□□□ 1.12
CLK2-203ENST00000368361 BIVMQ86UB2 503 aa22.03■■□□□ 1.12
CLK2-203ENST00000368361 GGNQ86UU5 652 aa22.03■■□□□ 1.12
CLK2-203ENST00000368361 TMEM123Q8N131 208 aa22.03■■□□□ 1.12
CLK2-203ENST00000368361 ZIC4Q8N9L1 334 aa22.03■■□□□ 1.12
CLK2-203ENST00000368361 SLC25A28Q96A46 364 aa22.03■■□□□ 1.12
CLK2-203ENST00000368361 C7orf50Q9BRJ6 194 aaKnown RBP22.03■■□□□ 1.12
CLK2-203ENST00000368361 ZNF275Q9NSD4 429 aaPredicted RBP22.03■■□□□ 1.12
CLK2-203ENST00000368361 CDV3Q9UKY7 258 aaKnown RBP22.03■■□□□ 1.12
CLK2-203ENST00000368361 RBMX2Q9Y388 322 aaKnown RBP22.03■■□□□ 1.12
CLK2-203ENST00000368361 LOC100289279A0A1B0GTE1 492 aa22.02■■□□□ 1.12
CLK2-203ENST00000368361 XRCC3O43542 346 aa22.02■■□□□ 1.12
CLK2-203ENST00000368361 CTAG2O75638 210 aa22.02■■□□□ 1.12
CLK2-203ENST00000368361 GLSO94925 669 aaPredicted RBP22.02■■□□□ 1.12
CLK2-203ENST00000368361 TNFSF15O95150 251 aa22.02■■□□□ 1.12
CLK2-203ENST00000368361 NR2C1P13056 603 aa22.02■■□□□ 1.12
CLK2-203ENST00000368361 PRKXP51817 358 aa22.02■■□□□ 1.12
CLK2-203ENST00000368361 RAC3P60763 192 aa22.02■■□□□ 1.12
CLK2-203ENST00000368361 PSMA6P60900 246 aaKnown RBP22.02■■□□□ 1.12
CLK2-203ENST00000368361 BTG1P62324 171 aa22.02■■□□□ 1.12
CLK2-203ENST00000368361 TAF13Q15543 124 aa22.02■■□□□ 1.12
CLK2-203ENST00000368361 SGCAQ16586 387 aa22.02■■□□□ 1.12
CLK2-203ENST00000368361 ANKRD16Q6P6B7 361 aa22.02■■□□□ 1.12
CLK2-203ENST00000368361 RHOUQ7L0Q8 258 aa22.02■■□□□ 1.12
CLK2-203ENST00000368361 KCNE4Q8WWG9 221 aa22.02■■□□□ 1.12
CLK2-203ENST00000368361 ZNF416Q9BWM5 594 aa22.02■■□□□ 1.12
CLK2-203ENST00000368361 CACNG6Q9BXT2 260 aa22.02■■□□□ 1.12
CLK2-203ENST00000368361 PCDHGA1Q9Y5H4 931 aa22.02■■□□□ 1.12
CLK2-203ENST00000368361 SDHBP21912 280 aa22.02■■□□□ 1.12
CLK2-203ENST00000368361 HTR2CP28335 458 aa22.02■■□□□ 1.12
CLK2-203ENST00000368361 LUZP2Q86TE4 346 aa22.02■■□□□ 1.12
CLK2-203ENST00000368361 FGGYQ96C11 551 aa22.02■■□□□ 1.12
CLK2-203ENST00000368361 SFXN2Q96NB2 322 aa22.02■■□□□ 1.12
CLK2-203ENST00000368361 TMEM272A0A1B0GTI8 110 aa22.01■■□□□ 1.11
CLK2-203ENST00000368361 SYT7O43581 403 aa22.01■■□□□ 1.11
CLK2-203ENST00000368361 GALR2O43603 387 aaPredicted RBP22.01■■□□□ 1.11
CLK2-203ENST00000368361 SLC2A1P11166 492 aa22.01■■□□□ 1.11
CLK2-203ENST00000368361 CD96P40200 585 aa22.01■■□□□ 1.11
CLK2-203ENST00000368361 STARP49675 285 aa22.01■■□□□ 1.11
CLK2-203ENST00000368361 MRPS10P82664 201 aaKnown RBP22.01■■□□□ 1.11
CLK2-203ENST00000368361 ZFP69Q49AA0 526 aa22.01■■□□□ 1.11
CLK2-203ENST00000368361 C10orf128Q5T292 105 aa22.01■■□□□ 1.11
CLK2-203ENST00000368361 ADAMTS17Q8TE56 1095 aa22.01■■□□□ 1.11
CLK2-203ENST00000368361 ZNF775Q96BV0 537 aaPredicted RBP22.01■■□□□ 1.11
CLK2-203ENST00000368361 NUBP2Q9Y5Y2 271 aa22.01■■□□□ 1.11
CLK2-203ENST00000368361 CD37P11049 281 aa22.01■■□□□ 1.11
CLK2-203ENST00000368361 CNR1P21554 472 aa22.01■■□□□ 1.11
CLK2-203ENST00000368361 ANOS1P23352 680 aa22.01■■□□□ 1.11
CLK2-203ENST00000368361 GDF1P27539 372 aa22.01■■□□□ 1.11
CLK2-203ENST00000368361 SUCLG1P53597 346 aaKnown RBP22.01■■□□□ 1.11
CLK2-203ENST00000368361 NELFAQ9H3P2 528 aa22.01■■□□□ 1.11
CLK2-203ENST00000368361 IL17BQ9UHF5 180 aa22.01■■□□□ 1.11
CLK2-203ENST00000368361 PCNX2A6NKB5 2137 aa22■■□□□ 1.11
CLK2-203ENST00000368361 GGT3PA6NGU5 568 aa22■■□□□ 1.11
CLK2-203ENST00000368361 ACOT7O00154 380 aa22■■□□□ 1.11
CLK2-203ENST00000368361 KDM4BO94953 1096 aa22■■□□□ 1.11
CLK2-203ENST00000368361 CARD18P57730 90 aa22■■□□□ 1.11
CLK2-203ENST00000368361 FOXO1Q12778 655 aa22■■□□□ 1.11
CLK2-203ENST00000368361 TMEM255AQ5JRV8 349 aa22■■□□□ 1.11
CLK2-203ENST00000368361 DCAF10Q5QP82 559 aa22■■□□□ 1.11
CLK2-203ENST00000368361 JAGN1Q8N5M9 183 aa22■■□□□ 1.11
CLK2-203ENST00000368361 OR51E1Q8TCB6 317 aa22■■□□□ 1.11
CLK2-203ENST00000368361 ADAT3Q96EY9 351 aaPredicted RBP22■■□□□ 1.11
CLK2-203ENST00000368361 SIGLEC12Q96PQ1 595 aa22■■□□□ 1.11
CLK2-203ENST00000368361 NIPAL2Q9H841 368 aa22■■□□□ 1.11
CLK2-203ENST00000368361 HRASLSQ9HDD0 168 aa22■■□□□ 1.11
CLK2-203ENST00000368361 ZFP64Q9NPA5 681 aa22■■□□□ 1.11
CLK2-203ENST00000368361 FOXD3Q9UJU5 478 aaPredicted RBP22■■□□□ 1.11
CLK2-203ENST00000368361 PAIP2BQ9ULR5 123 aaKnown RBP22■■□□□ 1.11
CLK2-203ENST00000368361 NCOA6Q14686 2063 aaPredicted RBP22■■□□□ 1.11
CLK2-203ENST00000368361 MEGF11A6BM72 1044 aa21.99■■□□□ 1.11
CLK2-203ENST00000368361 DNPH1O43598 174 aa21.99■■□□□ 1.11
CLK2-203ENST00000368361 GMDSO60547 372 aa21.99■■□□□ 1.11
CLK2-203ENST00000368361 NEURL1O76050 574 aa21.99■■□□□ 1.11
CLK2-203ENST00000368361 ECDO95905 644 aaPredicted RBP21.99■■□□□ 1.11
CLK2-203ENST00000368361 MSR1P21757 451 aa21.99■■□□□ 1.11
CLK2-203ENST00000368361 GUCA1AP43080 201 aaPredicted RBP21.99■■□□□ 1.11
CLK2-203ENST00000368361 ZNF133P52736 654 aaPredicted RBP21.99■■□□□ 1.11
CLK2-203ENST00000368361 ZNF121P58317 390 aaPredicted RBP21.99■■□□□ 1.11
CLK2-203ENST00000368361 RRAS2P62070 204 aaPredicted RBP21.99■■□□□ 1.11
CLK2-203ENST00000368361 LSM6P62312 80 aaKnown RBP21.99■■□□□ 1.11
CLK2-203ENST00000368361 JMJD6Q6NYC1 403 aaPredicted RBP21.99■■□□□ 1.11
CLK2-203ENST00000368361 SUMF1Q8NBK3 374 aa21.99■■□□□ 1.11
CLK2-203ENST00000368361 OR6M1Q8NGM8 313 aa21.99■■□□□ 1.11
CLK2-203ENST00000368361 OR1J2Q8NGS2 313 aa21.99■■□□□ 1.11
CLK2-203ENST00000368361 C15orf40Q8WUR7 153 aa21.99■■□□□ 1.11
CLK2-203ENST00000368361 MOB1AQ9H8S9 216 aa21.99■■□□□ 1.11
CLK2-203ENST00000368361 COPZ2Q9P299 210 aa21.99■■□□□ 1.11
CLK2-203ENST00000368361 A0A0A6YYJ9 748 aa21.99■■□□□ 1.11
CLK2-203ENST00000368361 CIB4A0PJX0 185 aa21.99■■□□□ 1.11
CLK2-203ENST00000368361 SF3B5Q9BWJ5 86 aaKnown RBP21.99■■□□□ 1.11
CLK2-203ENST00000368361 RBM24Q9BX46 236 aaKnown RBP21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms