RNA–Protein interactions for RNA: ENST00000368292.10

ECHDC1-204, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 854 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-204ENST00000368292 IFT46Q9NQC8 304 aa4.43□□□□□ -1.7
ECHDC1-204ENST00000368292 GKN1Q9NS71 199 aa4.43□□□□□ -1.7
ECHDC1-204ENST00000368292 MAT2BQ9NZL9 334 aa4.43□□□□□ -1.7
ECHDC1-204ENST00000368292 PSORS1C1Q9UIG5 152 aa4.43□□□□□ -1.7
ECHDC1-204ENST00000368292 MRTO4Q9UKD2 239 aaKnown RBP4.43□□□□□ -1.7
ECHDC1-204ENST00000368292 RAP2CQ9Y3L5 183 aa4.43□□□□□ -1.7
ECHDC1-204ENST00000368292 HES2Q9Y543 173 aa4.43□□□□□ -1.7
ECHDC1-204ENST00000368292 OR51B4Q9Y5P0 310 aa4.43□□□□□ -1.7
ECHDC1-204ENST00000368292 INSL5Q9Y5Q6 135 aa4.43□□□□□ -1.7
ECHDC1-204ENST00000368292 STYXL1Q9Y6J8 313 aa4.43□□□□□ -1.7
ECHDC1-204ENST00000368292 V9GYY9 64 aa4.43□□□□□ -1.7
ECHDC1-204ENST00000368292 A0A096LPK6 155 aa4.42□□□□□ -1.7
ECHDC1-204ENST00000368292 HYKKA2RU49 373 aa4.42□□□□□ -1.7
ECHDC1-204ENST00000368292 EFCAB7A8K855 629 aa4.42□□□□□ -1.7
ECHDC1-204ENST00000368292 NPIPA5E9PKD4 350 aa4.42□□□□□ -1.7
ECHDC1-204ENST00000368292 NPIPA3F8WFD2 350 aa4.42□□□□□ -1.7
ECHDC1-204ENST00000368292 BLOC1S5-TXNDC5H3BN57 136 aa4.42□□□□□ -1.7
ECHDC1-204ENST00000368292 SULT1C2O00338 296 aa4.42□□□□□ -1.7
ECHDC1-204ENST00000368292 BHLHE40O14503 412 aa4.42□□□□□ -1.7
ECHDC1-204ENST00000368292 PRMT5O14744 637 aaPredicted RBP4.42□□□□□ -1.7
ECHDC1-204ENST00000368292 ZNF749O43361 778 aa4.42□□□□□ -1.7
ECHDC1-204ENST00000368292 CEACAM4O75871 244 aa4.42□□□□□ -1.7
ECHDC1-204ENST00000368292 NDUFA7O95182 113 aa4.42□□□□□ -1.7
ECHDC1-204ENST00000368292 IFNA10P01566 189 aa4.42□□□□□ -1.7
ECHDC1-204ENST00000368292 IGHV2-70P01814 119 aa4.42□□□□□ -1.7
ECHDC1-204ENST00000368292 IFNA4P05014 189 aa4.42□□□□□ -1.7
ECHDC1-204ENST00000368292 C2P06681 752 aa4.42□□□□□ -1.7
ECHDC1-204ENST00000368292 KLK3P07288 261 aaPredicted RBP4.42□□□□□ -1.7
ECHDC1-204ENST00000368292 GP9P14770 177 aa4.42□□□□□ -1.7
ECHDC1-204ENST00000368292 TBXA2RP21731 343 aa4.42□□□□□ -1.7
ECHDC1-204ENST00000368292 CD1CP29017 333 aa4.42□□□□□ -1.7
ECHDC1-204ENST00000368292 ERP29P30040 261 aaKnown RBP4.42□□□□□ -1.7
ECHDC1-204ENST00000368292 GNRHRP30968 328 aa4.42□□□□□ -1.7
ECHDC1-204ENST00000368292 MATKP42679 507 aa4.42□□□□□ -1.7
ECHDC1-204ENST00000368292 NR0B1P51843 470 aaKnown RBP4.42□□□□□ -1.7
ECHDC1-204ENST00000368292 CRYBA4P53673 196 aa4.42□□□□□ -1.7
ECHDC1-204ENST00000368292 RANP62826 216 aaKnown RBP4.42□□□□□ -1.7
ECHDC1-204ENST00000368292 MBTD1Q05BQ5 628 aa4.42□□□□□ -1.7
ECHDC1-204ENST00000368292 TPBGQ13641 420 aa4.42□□□□□ -1.7
ECHDC1-204ENST00000368292 PGGHGQ32M88 737 aa4.42□□□□□ -1.7
ECHDC1-204ENST00000368292 ZNF658BQ4V348 819 aaPredicted RBP4.42□□□□□ -1.7
ECHDC1-204ENST00000368292 ASPRV1Q53RT3 343 aa4.42□□□□□ -1.7
ECHDC1-204ENST00000368292 ARMCX4Q5H9R4 360 aa4.42□□□□□ -1.7
ECHDC1-204ENST00000368292 OGFRL1Q5TC84 451 aaPredicted RBP4.42□□□□□ -1.7
ECHDC1-204ENST00000368292 C22orf42Q6IC83 251 aa4.42□□□□□ -1.7
ECHDC1-204ENST00000368292 FAM166AQ6J272 317 aa4.42□□□□□ -1.7
ECHDC1-204ENST00000368292 MFSD12Q6NUT3 480 aa4.42□□□□□ -1.7
ECHDC1-204ENST00000368292 FAM131AQ6UXB0 335 aa4.42□□□□□ -1.7
ECHDC1-204ENST00000368292 ZNF841Q6ZN19 808 aa4.42□□□□□ -1.7
ECHDC1-204ENST00000368292 ZNF836Q6ZNA1 936 aa4.42□□□□□ -1.7
ECHDC1-204ENST00000368292 CPEB2Q7Z5Q1 589 aaKnown RBP4.42□□□□□ -1.7
ECHDC1-204ENST00000368292 KCNMB4Q86W47 210 aa4.42□□□□□ -1.7
ECHDC1-204ENST00000368292 UNC93AQ86WB7 457 aa4.42□□□□□ -1.7
ECHDC1-204ENST00000368292 GPSM1Q86YR5 675 aa4.42□□□□□ -1.7
ECHDC1-204ENST00000368292 WDFY1Q8IWB7 410 aa4.42□□□□□ -1.7
ECHDC1-204ENST00000368292 IFT20Q8IY31 132 aa4.42□□□□□ -1.7
ECHDC1-204ENST00000368292 MUC20Q8N307 709 aaPredicted RBP4.42□□□□□ -1.7
ECHDC1-204ENST00000368292 LRRC18Q8N456 261 aa4.42□□□□□ -1.7
ECHDC1-204ENST00000368292 ATP6V1C2Q8NEY4 427 aa4.42□□□□□ -1.7
ECHDC1-204ENST00000368292 OR4K2Q8NGD2 314 aa4.42□□□□□ -1.7
ECHDC1-204ENST00000368292 OR5L1Q8NGL2 311 aa4.42□□□□□ -1.7
ECHDC1-204ENST00000368292 OR9A2Q8NGT5 310 aa4.42□□□□□ -1.7
ECHDC1-204ENST00000368292 OR4Q3Q8NH05 313 aa4.42□□□□□ -1.7
ECHDC1-204ENST00000368292 OR5AK3PQ8NH89 298 aa4.42□□□□□ -1.7
ECHDC1-204ENST00000368292 COQ8AQ8NI60 647 aa4.42□□□□□ -1.7
ECHDC1-204ENST00000368292 ZNF564Q8TBZ8 553 aaPredicted RBP4.42□□□□□ -1.7
ECHDC1-204ENST00000368292 FNDC8Q8TC99 324 aa4.42□□□□□ -1.7
ECHDC1-204ENST00000368292 MAGEE2Q8TD90 523 aaPredicted RBP4.42□□□□□ -1.7
ECHDC1-204ENST00000368292 C16orf78Q8WTQ4 265 aa4.42□□□□□ -1.7
ECHDC1-204ENST00000368292 ISOC2Q96AB3 205 aa4.42□□□□□ -1.7
ECHDC1-204ENST00000368292 C12orf43Q96C57 262 aaKnown RBP4.42□□□□□ -1.7
ECHDC1-204ENST00000368292 RNF183Q96D59 192 aa4.42□□□□□ -1.7
ECHDC1-204ENST00000368292 SGK494Q96LW2 274 aa4.42□□□□□ -1.7
ECHDC1-204ENST00000368292 CXCL16Q9H2A7 254 aa4.42□□□□□ -1.7
ECHDC1-204ENST00000368292 VCXQ9H320 206 aa4.42□□□□□ -1.7
ECHDC1-204ENST00000368292 TMEM38AQ9H6F2 299 aa4.42□□□□□ -1.7
ECHDC1-204ENST00000368292 ACSS1Q9NUB1 689 aaPredicted RBP4.42□□□□□ -1.7
ECHDC1-204ENST00000368292 GSKIPQ9P0R6 139 aa4.42□□□□□ -1.7
ECHDC1-204ENST00000368292 NPIPA1Q9UND3 350 aa4.42□□□□□ -1.7
ECHDC1-204ENST00000368292 A3GALT2U3KPV4 340 aa4.42□□□□□ -1.7
ECHDC1-204ENST00000368292 RTTNQ86VV8 2226 aa4.42□□□□□ -1.7
ECHDC1-204ENST00000368292 NFASCO94856 1347 aa4.42□□□□□ -1.7
ECHDC1-204ENST00000368292 ZNF638Q14966 1978 aaKnown RBP4.42□□□□□ -1.7
ECHDC1-204ENST00000368292 hCG_38984A0A1B0GV85 526 aa4.41□□□□□ -1.7
ECHDC1-204ENST00000368292 A0A1W2PNU3 283 aaPredicted RBP4.41□□□□□ -1.7
ECHDC1-204ENST00000368292 A0A1W2PRG6 482 aa4.41□□□□□ -1.7
ECHDC1-204ENST00000368292 IMPA2O14732 288 aa4.41□□□□□ -1.7
ECHDC1-204ENST00000368292 SULT1C4O75897 302 aa4.41□□□□□ -1.7
ECHDC1-204ENST00000368292 OR7A10O76100 309 aa4.41□□□□□ -1.7
ECHDC1-204ENST00000368292 CLDN9O95484 217 aa4.41□□□□□ -1.7
ECHDC1-204ENST00000368292 CYB5R3P00387 301 aaPredicted RBP4.41□□□□□ -1.7
ECHDC1-204ENST00000368292 IFNGP01579 166 aa4.41□□□□□ -1.7
ECHDC1-204ENST00000368292 NR3C1P04150 777 aa4.41□□□□□ -1.7
ECHDC1-204ENST00000368292 GAPDHP04406 335 aaKnown RBP4.41□□□□□ -1.7
ECHDC1-204ENST00000368292 IFNW1P05000 195 aa4.41□□□□□ -1.7
ECHDC1-204ENST00000368292 S100A8P05109 93 aa4.41□□□□□ -1.7
ECHDC1-204ENST00000368292 APRTP07741 180 aa4.41□□□□□ -1.7
ECHDC1-204ENST00000368292 GABRG2P18507 467 aa4.41□□□□□ -1.7
ECHDC1-204ENST00000368292 HSPA9P38646 679 aaKnown RBP4.41□□□□□ -1.7
ECHDC1-204ENST00000368292 CSNK1A1P48729 337 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms