RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 HMGN1P05114 100 aa8.42□□□□□ -1.06
CD48-202ENST00000368046 COL8A2P25067 703 aa8.42□□□□□ -1.06
CD48-202ENST00000368046 FASP25445 335 aa8.42□□□□□ -1.06
CD48-202ENST00000368046 GIFP27352 417 aa8.42□□□□□ -1.06
CD48-202ENST00000368046 POU1F1P28069 291 aa8.42□□□□□ -1.06
CD48-202ENST00000368046 FMO3P31513 532 aa8.42□□□□□ -1.06
CD48-202ENST00000368046 PYCR1P32322 319 aa8.42□□□□□ -1.06
CD48-202ENST00000368046 GRK5P34947 590 aa8.42□□□□□ -1.06
CD48-202ENST00000368046 GGT2P36268 569 aa8.42□□□□□ -1.06
CD48-202ENST00000368046 MPV17P39210 176 aa8.42□□□□□ -1.06
CD48-202ENST00000368046 NR4A2P43354 598 aa8.42□□□□□ -1.06
CD48-202ENST00000368046 RGS6P49758 472 aa8.42□□□□□ -1.06
CD48-202ENST00000368046 BLVRAP53004 296 aa8.42□□□□□ -1.06
CD48-202ENST00000368046 SLC25A1P53007 311 aa8.42□□□□□ -1.06
CD48-202ENST00000368046 TMEM33P57088 247 aa8.42□□□□□ -1.06
CD48-202ENST00000368046 CDK5Q00535 292 aa8.42□□□□□ -1.06
CD48-202ENST00000368046 DBPQ10586 325 aaPredicted RBP8.42□□□□□ -1.06
CD48-202ENST00000368046 ECH1Q13011 328 aa8.42□□□□□ -1.06
CD48-202ENST00000368046 CRMP1Q14194 572 aa8.42□□□□□ -1.06
CD48-202ENST00000368046 GINS1Q14691 196 aa8.42□□□□□ -1.06
CD48-202ENST00000368046 CARTPTQ16568 116 aa8.42□□□□□ -1.06
CD48-202ENST00000368046 PCGF3Q3KNV8 242 aa8.42□□□□□ -1.06
CD48-202ENST00000368046 SPATA46Q5T0L3 261 aa8.42□□□□□ -1.06
CD48-202ENST00000368046 SLC18B1Q6NT16 456 aa8.42□□□□□ -1.06
CD48-202ENST00000368046 ACSM5Q6NUN0 579 aa8.42□□□□□ -1.06
CD48-202ENST00000368046 SLC27A4Q6P1M0 643 aa8.42□□□□□ -1.06
CD48-202ENST00000368046 SHQ1Q6PI26 577 aaKnown RBP8.42□□□□□ -1.06
CD48-202ENST00000368046 CORO6Q6QEF8 472 aa8.42□□□□□ -1.06
CD48-202ENST00000368046 CCDC121Q6ZUS5 278 aa8.42□□□□□ -1.06
CD48-202ENST00000368046 ASRGL1Q7L266 308 aa8.42□□□□□ -1.06
CD48-202ENST00000368046 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.42□□□□□ -1.06
CD48-202ENST00000368046 HS3ST5Q8IZT8 346 aa8.42□□□□□ -1.06
CD48-202ENST00000368046 OR5L1Q8NGL2 311 aa8.42□□□□□ -1.06
CD48-202ENST00000368046 SNX33Q8WV41 574 aa8.42□□□□□ -1.06
CD48-202ENST00000368046 ZNRF4Q8WWF5 429 aa8.42□□□□□ -1.06
CD48-202ENST00000368046 IPCEF1Q8WWN9 437 aaPredicted RBP8.42□□□□□ -1.06
CD48-202ENST00000368046 RDH5Q92781 318 aa8.42□□□□□ -1.06
CD48-202ENST00000368046 UTP4Q969X6 686 aaKnown RBP8.42□□□□□ -1.06
CD48-202ENST00000368046 HAVCR1Q96D42 359 aa8.42□□□□□ -1.06
CD48-202ENST00000368046 COQ7Q99807 217 aa8.42□□□□□ -1.06
CD48-202ENST00000368046 HDHD2Q9H0R4 259 aa8.42□□□□□ -1.06
CD48-202ENST00000368046 CYSLTR2Q9NS75 346 aa8.42□□□□□ -1.06
CD48-202ENST00000368046 MRPL22Q9NWU5 206 aaKnown RBP8.42□□□□□ -1.06
CD48-202ENST00000368046 POLR1DQ9Y2S0 133 aa8.42□□□□□ -1.06
CD48-202ENST00000368046 MTORP42345 2549 aa8.42□□□□□ -1.06
CD48-202ENST00000368046 NF1P21359 2839 aa8.41□□□□□ -1.06
CD48-202ENST00000368046 SETD2Q9BYW2 2564 aaPredicted RBP8.41□□□□□ -1.06
CD48-202ENST00000368046 PLSCR5A0PG75 271 aa8.41□□□□□ -1.06
CD48-202ENST00000368046 RIIAD1A6NNX1 92 aa8.41□□□□□ -1.06
CD48-202ENST00000368046 LYNX1G3V0Z9 82 aa8.41□□□□□ -1.06
CD48-202ENST00000368046 J3QW42 95 aa8.41□□□□□ -1.06
CD48-202ENST00000368046 DBHP09172 617 aa8.41□□□□□ -1.06
CD48-202ENST00000368046 LYNX1P0DP58 116 aa8.41□□□□□ -1.06
CD48-202ENST00000368046 ZNF3P17036 446 aa8.41□□□□□ -1.06
CD48-202ENST00000368046 SPI1P17947 270 aa8.41□□□□□ -1.06
CD48-202ENST00000368046 MAGEB1P43366 347 aa8.41□□□□□ -1.06
CD48-202ENST00000368046 ZNF81P51508 661 aa8.41□□□□□ -1.06
CD48-202ENST00000368046 MMP15P51511 669 aa8.41□□□□□ -1.06
CD48-202ENST00000368046 MRPS11P82912 194 aaKnown RBP8.41□□□□□ -1.06
CD48-202ENST00000368046 KRTAP1-1Q07627 177 aa8.41□□□□□ -1.06
CD48-202ENST00000368046 PSG7Q13046 419 aa8.41□□□□□ -1.06
CD48-202ENST00000368046 RIN1Q13671 783 aa8.41□□□□□ -1.06
CD48-202ENST00000368046 PCK2Q16822 640 aa8.41□□□□□ -1.06
CD48-202ENST00000368046 ALKBH6Q3KRA9 238 aa8.41□□□□□ -1.06
CD48-202ENST00000368046 TEX30Q5JUR7 227 aa8.41□□□□□ -1.06
CD48-202ENST00000368046 RFPL4BQ6ZWI9 263 aa8.41□□□□□ -1.06
CD48-202ENST00000368046 HIPK1Q86Z02 1210 aa8.41□□□□□ -1.06
CD48-202ENST00000368046 LINC00346Q8IVM7 164 aa8.41□□□□□ -1.06
CD48-202ENST00000368046 ATG16L2Q8NAA4 619 aa8.41□□□□□ -1.06
CD48-202ENST00000368046 OR51L1Q8NGJ5 315 aa8.41□□□□□ -1.06
CD48-202ENST00000368046 OR9Q1Q8NGQ5 310 aa8.41□□□□□ -1.06
CD48-202ENST00000368046 OR5K1Q8NHB7 308 aa8.41□□□□□ -1.06
CD48-202ENST00000368046 DNAJC9Q8WXX5 260 aa8.41□□□□□ -1.06
CD48-202ENST00000368046 SLC7A6Q92536 515 aa8.41□□□□□ -1.06
CD48-202ENST00000368046 CMBLQ96DG6 245 aa8.41□□□□□ -1.06
CD48-202ENST00000368046 DIRC2Q96SL1 478 aa8.41□□□□□ -1.06
CD48-202ENST00000368046 PITX2Q99697 317 aa8.41□□□□□ -1.06
CD48-202ENST00000368046 ZFAND3Q9H8U3 227 aa8.41□□□□□ -1.06
CD48-202ENST00000368046 CGGBP1Q9UFW8 167 aaPredicted RBP8.41□□□□□ -1.06
CD48-202ENST00000368046 NIPBLQ6KC79 2804 aaeCLIP8.41□□□□□ -1.06
CD48-202ENST00000368046 TVP23AA6NH52 213 aa8.4□□□□□ -1.06
CD48-202ENST00000368046 G3V2T6 193 aa8.4□□□□□ -1.06
CD48-202ENST00000368046 ZNF593O00488 134 aaPredicted RBP8.4□□□□□ -1.06
CD48-202ENST00000368046 EBAG9O00559 213 aa8.4□□□□□ -1.06
CD48-202ENST00000368046 TLX2O43763 284 aaPredicted RBP8.4□□□□□ -1.06
CD48-202ENST00000368046 CD5LO43866 347 aa8.4□□□□□ -1.06
CD48-202ENST00000368046 CIB2O75838 187 aa8.4□□□□□ -1.06
CD48-202ENST00000368046 GYPBP06028 91 aa8.4□□□□□ -1.06
CD48-202ENST00000368046 ADH4P08319 380 aa8.4□□□□□ -1.06
CD48-202ENST00000368046 RAC2P15153 192 aa8.4□□□□□ -1.06
CD48-202ENST00000368046 ACHEP22303 614 aa8.4□□□□□ -1.06
CD48-202ENST00000368046 CRYBB2P43320 205 aa8.4□□□□□ -1.06
CD48-202ENST00000368046 DAPP51397 102 aa8.4□□□□□ -1.06
CD48-202ENST00000368046 CRISP1P54107 249 aa8.4□□□□□ -1.06
CD48-202ENST00000368046 TPTEP56180 551 aa8.4□□□□□ -1.06
CD48-202ENST00000368046 CCL8P80075 99 aa8.4□□□□□ -1.06
CD48-202ENST00000368046 CCNIQ14094 377 aa8.4□□□□□ -1.06
CD48-202ENST00000368046 GGTLC2Q14390 218 aa8.4□□□□□ -1.06
CD48-202ENST00000368046 ATP6AP1Q15904 470 aa8.4□□□□□ -1.06
CD48-202ENST00000368046 TMEM249Q2WGJ8 235 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms