RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 LIPGQ9Y5X9 500 aa10.69□□□□□ -0.7
USF1-203ENST00000368021 CACNG2Q9Y698 323 aa10.69□□□□□ -0.7
USF1-203ENST00000368021 IGKV3D-15A0A087WSY6 115 aa10.68□□□□□ -0.7
USF1-203ENST00000368021 KRBOX1C9JBD0 128 aa10.68□□□□□ -0.7
USF1-203ENST00000368021 PLPP2O43688 288 aa10.68□□□□□ -0.7
USF1-203ENST00000368021 AQP8O94778 261 aa10.68□□□□□ -0.7
USF1-203ENST00000368021 GPANK1O95872 356 aa10.68□□□□□ -0.7
USF1-203ENST00000368021 TACSTD2P09758 323 aa10.68□□□□□ -0.7
USF1-203ENST00000368021 GALP22466 123 aa10.68□□□□□ -0.7
USF1-203ENST00000368021 CSNK1A1P48729 337 aa10.68□□□□□ -0.7
USF1-203ENST00000368021 NCS1P62166 190 aa10.68□□□□□ -0.7
USF1-203ENST00000368021 ADAM8P78325 824 aa10.68□□□□□ -0.7
USF1-203ENST00000368021 PMP22Q01453 160 aa10.68□□□□□ -0.7
USF1-203ENST00000368021 RASGEF1BQ0VAM2 473 aa10.68□□□□□ -0.7
USF1-203ENST00000368021 MRPL28Q13084 256 aaKnown RBP10.68□□□□□ -0.7
USF1-203ENST00000368021 C10orf128Q5T292 105 aa10.68□□□□□ -0.7
USF1-203ENST00000368021 SLC18B1Q6NT16 456 aa10.68□□□□□ -0.7
USF1-203ENST00000368021 Q8NA96 180 aa10.68□□□□□ -0.7
USF1-203ENST00000368021 RNF128Q8TEB7 428 aa10.68□□□□□ -0.7
USF1-203ENST00000368021 ROBO4Q8WZ75 1007 aa10.68□□□□□ -0.7
USF1-203ENST00000368021 TMEM54Q969K7 222 aa10.68□□□□□ -0.7
USF1-203ENST00000368021 PELI1Q96FA3 418 aa10.68□□□□□ -0.7
USF1-203ENST00000368021 RADILQ96JH8 1075 aa10.68□□□□□ -0.7
USF1-203ENST00000368021 CHCHD6Q9BRQ6 235 aa10.68□□□□□ -0.7
USF1-203ENST00000368021 IFT46Q9NQC8 304 aa10.68□□□□□ -0.7
USF1-203ENST00000368021 PCDHB16Q9NRJ7 776 aa10.68□□□□□ -0.7
USF1-203ENST00000368021 FOXD3Q9UJU5 478 aaPredicted RBP10.68□□□□□ -0.7
USF1-203ENST00000368021 A0A075B6Q4 140 aa10.68□□□□□ -0.7
USF1-203ENST00000368021 A0A0G2JMP0 313 aa10.68□□□□□ -0.7
USF1-203ENST00000368021 LOC100506127A0A0U1RQW1 187 aa10.68□□□□□ -0.7
USF1-203ENST00000368021 A0A1B0GVC2 190 aa10.68□□□□□ -0.7
USF1-203ENST00000368021 MEIOCA2RUB1 952 aa10.68□□□□□ -0.7
USF1-203ENST00000368021 ZNF98A6NK75 572 aa10.68□□□□□ -0.7
USF1-203ENST00000368021 GPR171O14626 319 aa10.68□□□□□ -0.7
USF1-203ENST00000368021 GPX5O75715 221 aa10.68□□□□□ -0.7
USF1-203ENST00000368021 SYNGR4O95473 234 aa10.68□□□□□ -0.7
USF1-203ENST00000368021 CD1AP06126 327 aa10.68□□□□□ -0.7
USF1-203ENST00000368021 QDPRP09417 244 aa10.68□□□□□ -0.7
USF1-203ENST00000368021 ZNF823P16415 610 aa10.68□□□□□ -0.7
USF1-203ENST00000368021 LAP3P28838 519 aa10.68□□□□□ -0.7
USF1-203ENST00000368021 TGM4P49221 684 aa10.68□□□□□ -0.7
USF1-203ENST00000368021 LSM3P62310 102 aaKnown RBP10.68□□□□□ -0.7
USF1-203ENST00000368021 SIRPAP78324 504 aa10.68□□□□□ -0.7
USF1-203ENST00000368021 TLE1Q04724 770 aa10.68□□□□□ -0.7
USF1-203ENST00000368021 SRYQ05066 204 aa10.68□□□□□ -0.7
USF1-203ENST00000368021 TP53I3Q53FA7 332 aa10.68□□□□□ -0.7
USF1-203ENST00000368021 PRR30Q53SZ7 412 aaPredicted RBP10.68□□□□□ -0.7
USF1-203ENST00000368021 CLLU1Q5K131 121 aa10.68□□□□□ -0.7
USF1-203ENST00000368021 LRFN4Q6PJG9 635 aa10.68□□□□□ -0.7
USF1-203ENST00000368021 TMEM45BQ96B21 275 aa10.68□□□□□ -0.7
USF1-203ENST00000368021 TTYH2Q9BSA4 534 aa10.68□□□□□ -0.7
USF1-203ENST00000368021 EXO5Q9H790 373 aa10.68□□□□□ -0.7
USF1-203ENST00000368021 RNF122Q9H9V4 155 aa10.68□□□□□ -0.7
USF1-203ENST00000368021 MED9Q9NWA0 146 aa10.68□□□□□ -0.7
USF1-203ENST00000368021 KCNG2Q9UJ96 466 aa10.68□□□□□ -0.7
USF1-203ENST00000368021 GNG8Q9UK08 70 aa10.68□□□□□ -0.7
USF1-203ENST00000368021 SSR3Q9UNL2 185 aa10.68□□□□□ -0.7
USF1-203ENST00000368021 KLHDC2Q9Y2U9 406 aa10.68□□□□□ -0.7
USF1-203ENST00000368021 OGG1O15527 345 aa10.67□□□□□ -0.7
USF1-203ENST00000368021 GMDSO60547 372 aa10.67□□□□□ -0.7
USF1-203ENST00000368021 SLC22A5O76082 557 aa10.67□□□□□ -0.7
USF1-203ENST00000368021 ABHD16AO95870 558 aa10.67□□□□□ -0.7
USF1-203ENST00000368021 HLA-DPB1P04440 258 aa10.67□□□□□ -0.7
USF1-203ENST00000368021 ZP3P21754 424 aa10.67□□□□□ -0.7
USF1-203ENST00000368021 FGF9P31371 208 aaPredicted RBP10.67□□□□□ -0.7
USF1-203ENST00000368021 SELENOPP49908 381 aa10.67□□□□□ -0.7
USF1-203ENST00000368021 ROM1Q03395 351 aa10.67□□□□□ -0.7
USF1-203ENST00000368021 SCN1BQ07699 218 aa10.67□□□□□ -0.7
USF1-203ENST00000368021 TRAM1Q15629 374 aa10.67□□□□□ -0.7
USF1-203ENST00000368021 HSD17B12Q53GQ0 312 aa10.67□□□□□ -0.7
USF1-203ENST00000368021 CARD17Q5XLA6 110 aa10.67□□□□□ -0.7
USF1-203ENST00000368021 DMKNQ6E0U4 476 aaPredicted RBP10.67□□□□□ -0.7
USF1-203ENST00000368021 RPUSD3Q6P087 351 aaKnown RBP10.67□□□□□ -0.7
USF1-203ENST00000368021 RPL22L1Q6P5R6 122 aaKnown RBP10.67□□□□□ -0.7
USF1-203ENST00000368021 FAM220AQ7Z4H9 259 aa10.67□□□□□ -0.7
USF1-203ENST00000368021 STX12Q86Y82 276 aa10.67□□□□□ -0.7
USF1-203ENST00000368021 C20orf196Q8IYI0 205 aa10.67□□□□□ -0.7
USF1-203ENST00000368021 CISD2Q8N5K1 135 aaKnown RBP10.67□□□□□ -0.7
USF1-203ENST00000368021 PARP16Q8N5Y8 322 aa10.67□□□□□ -0.7
USF1-203ENST00000368021 ZFP41Q8N8Y5 198 aa10.67□□□□□ -0.7
USF1-203ENST00000368021 GDPD1Q8N9F7 314 aa10.67□□□□□ -0.7
USF1-203ENST00000368021 OR6N1Q8NGY5 312 aa10.67□□□□□ -0.7
USF1-203ENST00000368021 NDNFQ8TB73 568 aa10.67□□□□□ -0.7
USF1-203ENST00000368021 ABHD3Q8WU67 409 aa10.67□□□□□ -0.7
USF1-203ENST00000368021 NSMAFQ92636 917 aa10.67□□□□□ -0.7
USF1-203ENST00000368021 WDYHV1Q96HA8 205 aa10.67□□□□□ -0.7
USF1-203ENST00000368021 FOXN4Q96NZ1 517 aa10.67□□□□□ -0.7
USF1-203ENST00000368021 USB1Q9BQ65 265 aaKnown RBP10.67□□□□□ -0.7
USF1-203ENST00000368021 ZNF416Q9BWM5 594 aa10.67□□□□□ -0.7
USF1-203ENST00000368021 DCSTAMPQ9H295 470 aa10.67□□□□□ -0.7
USF1-203ENST00000368021 POLE4Q9NR33 117 aa10.67□□□□□ -0.7
USF1-203ENST00000368021 PLSCR2Q9NRY7 297 aa10.67□□□□□ -0.7
USF1-203ENST00000368021 SPRR3Q9UBC9 169 aa10.67□□□□□ -0.7
USF1-203ENST00000368021 ING1Q9UK53 422 aaPredicted RBP10.67□□□□□ -0.7
USF1-203ENST00000368021 TRDV1A0A1B0GX56 115 aa10.66□□□□□ -0.7
USF1-203ENST00000368021 PRR32B1ATL7 298 aa10.66□□□□□ -0.7
USF1-203ENST00000368021 E9PI62 339 aa10.66□□□□□ -0.7
USF1-203ENST00000368021 I3L521 148 aa10.66□□□□□ -0.7
USF1-203ENST00000368021 AQP7O14520 342 aa10.66□□□□□ -0.7
USF1-203ENST00000368021 SPARCP09486 303 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms