RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 SLC25A47Q6Q0C1 308 aa11.94□□□□□ -0.5
VAMP4-202ENST00000367740 HDDC2Q7Z4H3 204 aa11.94□□□□□ -0.5
VAMP4-202ENST00000367740 NANOGNBQ7Z5D8 188 aa11.94□□□□□ -0.5
VAMP4-202ENST00000367740 BEND2Q8NDZ0 799 aa11.94□□□□□ -0.5
VAMP4-202ENST00000367740 HDAC2Q92769 488 aaKnown RBP11.94□□□□□ -0.5
VAMP4-202ENST00000367740 APOPT1Q96IL0 206 aa11.94□□□□□ -0.5
VAMP4-202ENST00000367740 ZNF702PQ9H963 129 aa11.94□□□□□ -0.5
VAMP4-202ENST00000367740 C20orf141Q9NUB4 165 aa11.94□□□□□ -0.5
VAMP4-202ENST00000367740 ONECUT1Q9UBC0 465 aa11.94□□□□□ -0.5
VAMP4-202ENST00000367740 BLOC1S5-TXNDC5H3BN57 136 aa11.93□□□□□ -0.5
VAMP4-202ENST00000367740 KPNA4O00629 521 aaPredicted RBP11.93□□□□□ -0.5
VAMP4-202ENST00000367740 DVL1O14640 695 aa11.93□□□□□ -0.5
VAMP4-202ENST00000367740 CHP2O43745 196 aa11.93□□□□□ -0.5
VAMP4-202ENST00000367740 FMO6PO60774 539 aa11.93□□□□□ -0.5
VAMP4-202ENST00000367740 SHBGP04278 402 aa11.93□□□□□ -0.5
VAMP4-202ENST00000367740 ZCCHC18P0CG32 403 aa11.93□□□□□ -0.5
VAMP4-202ENST00000367740 COX5BP10606 129 aa11.93□□□□□ -0.5
VAMP4-202ENST00000367740 EEF1B2P24534 225 aaKnown RBP11.93□□□□□ -0.5
VAMP4-202ENST00000367740 HTR5AP47898 357 aa11.93□□□□□ -0.5
VAMP4-202ENST00000367740 DAP3P51398 398 aaKnown RBP11.93□□□□□ -0.5
VAMP4-202ENST00000367740 RAD23AP54725 363 aa11.93□□□□□ -0.5
VAMP4-202ENST00000367740 RPL18Q07020 188 aaKnown RBP11.93□□□□□ -0.5
VAMP4-202ENST00000367740 CKAP4Q07065 602 aaKnown RBP11.93□□□□□ -0.5
VAMP4-202ENST00000367740 CD47Q08722 323 aa11.93□□□□□ -0.5
VAMP4-202ENST00000367740 DCTN2Q13561 401 aaKnown RBP11.93□□□□□ -0.5
VAMP4-202ENST00000367740 KCNJ8Q15842 424 aa11.93□□□□□ -0.5
VAMP4-202ENST00000367740 C1orf94Q6P1W5 598 aa11.93□□□□□ -0.5
VAMP4-202ENST00000367740 FBXW12Q6X9E4 464 aa11.93□□□□□ -0.5
VAMP4-202ENST00000367740 FOXL2NBQ6ZUU3 175 aa11.93□□□□□ -0.5
VAMP4-202ENST00000367740 C10orf111Q8N326 155 aa11.93□□□□□ -0.5
VAMP4-202ENST00000367740 FGFRL1Q8N441 504 aa11.93□□□□□ -0.5
VAMP4-202ENST00000367740 CLDN22Q8N7P3 220 aa11.93□□□□□ -0.5
VAMP4-202ENST00000367740 ZNF781Q8N8C0 355 aa11.93□□□□□ -0.5
VAMP4-202ENST00000367740 BHLHE23Q8NDY6 225 aa11.93□□□□□ -0.5
VAMP4-202ENST00000367740 OR11L1Q8NGX0 322 aa11.93□□□□□ -0.5
VAMP4-202ENST00000367740 COG8Q96MW5 612 aa11.93□□□□□ -0.5
VAMP4-202ENST00000367740 SSX3Q99909 188 aa11.93□□□□□ -0.5
VAMP4-202ENST00000367740 TXLNGYQ9BZA5 131 aa11.93□□□□□ -0.5
VAMP4-202ENST00000367740 NPFFR1Q9GZQ6 430 aa11.93□□□□□ -0.5
VAMP4-202ENST00000367740 PTTG3PQ9NZH4 202 aa11.93□□□□□ -0.5
VAMP4-202ENST00000367740 DNAJB11Q9UBS4 358 aa11.93□□□□□ -0.5
VAMP4-202ENST00000367740 HERC2O95714 4834 aa11.92□□□□□ -0.5
VAMP4-202ENST00000367740 A0A1W2PRX2 142 aa11.92□□□□□ -0.5
VAMP4-202ENST00000367740 SMIM23A6NLE4 172 aa11.92□□□□□ -0.5
VAMP4-202ENST00000367740 LGALS8O00214 317 aa11.92□□□□□ -0.5
VAMP4-202ENST00000367740 DOK2O60496 412 aa11.92□□□□□ -0.5
VAMP4-202ENST00000367740 LYPD3O95274 346 aa11.92□□□□□ -0.5
VAMP4-202ENST00000367740 ECDO95905 644 aaPredicted RBP11.92□□□□□ -0.5
VAMP4-202ENST00000367740 THY1P04216 161 aa11.92□□□□□ -0.5
VAMP4-202ENST00000367740 HLA-DPB1P04440 258 aa11.92□□□□□ -0.5
VAMP4-202ENST00000367740 UMPSP11172 480 aa11.92□□□□□ -0.5
VAMP4-202ENST00000367740 BMP2P12643 396 aa11.92□□□□□ -0.5
VAMP4-202ENST00000367740 LBPP18428 481 aa11.92□□□□□ -0.5
VAMP4-202ENST00000367740 RGNQ15493 299 aa11.92□□□□□ -0.5
VAMP4-202ENST00000367740 MPPED2Q15777 294 aa11.92□□□□□ -0.5
VAMP4-202ENST00000367740 C11orf91Q3C1V1 193 aa11.92□□□□□ -0.5
VAMP4-202ENST00000367740 HHATQ5VTY9 493 aa11.92□□□□□ -0.5
VAMP4-202ENST00000367740 PRAMEF6Q5VXH4 476 aa11.92□□□□□ -0.5
VAMP4-202ENST00000367740 ZNF613Q6PF04 617 aa11.92□□□□□ -0.5
VAMP4-202ENST00000367740 Q8N7P7 452 aa11.92□□□□□ -0.5
VAMP4-202ENST00000367740 SLC7A13Q8TCU3 470 aa11.92□□□□□ -0.5
VAMP4-202ENST00000367740 C17orf50Q8WW18 174 aa11.92□□□□□ -0.5
VAMP4-202ENST00000367740 ST8SIA4Q92187 359 aa11.92□□□□□ -0.5
VAMP4-202ENST00000367740 SLC7A6Q92536 515 aa11.92□□□□□ -0.5
VAMP4-202ENST00000367740 ZNF582Q96NG8 517 aaPredicted RBP11.92□□□□□ -0.5
VAMP4-202ENST00000367740 ECSITQ9BQ95 431 aa11.92□□□□□ -0.5
VAMP4-202ENST00000367740 RAB18Q9NP72 206 aa11.92□□□□□ -0.5
VAMP4-202ENST00000367740 UFSP2Q9NUQ7 469 aa11.92□□□□□ -0.5
VAMP4-202ENST00000367740 AIG1Q9NVV5 245 aa11.92□□□□□ -0.5
VAMP4-202ENST00000367740 PYCARDQ9ULZ3 195 aa11.92□□□□□ -0.5
VAMP4-202ENST00000367740 WDR91A4D1P6 747 aa11.91□□□□□ -0.5
VAMP4-202ENST00000367740 GMNCA6NCL1 334 aa11.91□□□□□ -0.5
VAMP4-202ENST00000367740 IQCF6A8MYZ5 107 aa11.91□□□□□ -0.5
VAMP4-202ENST00000367740 C5orf58C9J3I9 102 aa11.91□□□□□ -0.5
VAMP4-202ENST00000367740 HDAC3O15379 428 aa11.91□□□□□ -0.5
VAMP4-202ENST00000367740 ITM2AO43736 263 aa11.91□□□□□ -0.5
VAMP4-202ENST00000367740 DUS4LO95620 317 aaKnown RBP11.91□□□□□ -0.5
VAMP4-202ENST00000367740 ANP32DO95626 131 aa11.91□□□□□ -0.5
VAMP4-202ENST00000367740 HIST1H2ABP04908 130 aa11.91□□□□□ -0.5
VAMP4-202ENST00000367740 PF4V1P10720 104 aa11.91□□□□□ -0.5
VAMP4-202ENST00000367740 ZNF26P17031 533 aaPredicted RBP11.91□□□□□ -0.5
VAMP4-202ENST00000367740 FPR3P25089 353 aa11.91□□□□□ -0.5
VAMP4-202ENST00000367740 HIST3H2AQ7L7L0 130 aa11.91□□□□□ -0.5
VAMP4-202ENST00000367740 SYT9Q86SS6 491 aa11.91□□□□□ -0.5
VAMP4-202ENST00000367740 CELF2-AS1Q8N7Q2 184 aa11.91□□□□□ -0.5
VAMP4-202ENST00000367740 LY6G5BQ8NDX9 201 aa11.91□□□□□ -0.5
VAMP4-202ENST00000367740 NFKBIDQ8NI38 313 aa11.91□□□□□ -0.5
VAMP4-202ENST00000367740 RORBQ92753 470 aa11.91□□□□□ -0.5
VAMP4-202ENST00000367740 TNFRSF14Q92956 283 aa11.91□□□□□ -0.5
VAMP4-202ENST00000367740 HIST1H2ACQ93077 130 aa11.91□□□□□ -0.5
VAMP4-202ENST00000367740 ERGIC1Q969X5 290 aa11.91□□□□□ -0.5
VAMP4-202ENST00000367740 GYPAP02724 150 aa11.9□□□□□ -0.5
VAMP4-202ENST00000367740 SCG5P05408 212 aa11.9□□□□□ -0.5
VAMP4-202ENST00000367740 FAM153BP0C7A2 387 aa11.9□□□□□ -0.5
VAMP4-202ENST00000367740 MSR1P21757 451 aa11.9□□□□□ -0.5
VAMP4-202ENST00000367740 CD200P41217 278 aa11.9□□□□□ -0.5
VAMP4-202ENST00000367740 OR8B8Q15620 311 aa11.9□□□□□ -0.5
VAMP4-202ENST00000367740 INTS11Q5TA45 600 aaKnown RBP11.9□□□□□ -0.5
VAMP4-202ENST00000367740 OGFOD2Q6N063 350 aa11.9□□□□□ -0.5
VAMP4-202ENST00000367740 TTC33Q6PID6 262 aaPredicted RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms