RNA–Protein interactions for RNA: ENST00000367569.3

SF3B5-201, Transcript of splicing factor 3b subunit 5, humanhuman

APPRIS P1 BASIC

Gene SF3B5, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B5-201ENST00000367569 SLC27A4Q6P1M0 643 aa12.53□□□□□ -0.4
SF3B5-201ENST00000367569 PLBD1Q6P4A8 553 aa12.53□□□□□ -0.4
SF3B5-201ENST00000367569 CD300LDQ6UXZ3 194 aa12.53□□□□□ -0.4
SF3B5-201ENST00000367569 SYT9Q86SS6 491 aa12.53□□□□□ -0.4
SF3B5-201ENST00000367569 BBS1Q8NFJ9 593 aa12.53□□□□□ -0.4
SF3B5-201ENST00000367569 OR10S1Q8NGN2 331 aa12.53□□□□□ -0.4
SF3B5-201ENST00000367569 OR2AJ1Q8NGZ0 328 aa12.53□□□□□ -0.4
SF3B5-201ENST00000367569 OR5K1Q8NHB7 308 aa12.53□□□□□ -0.4
SF3B5-201ENST00000367569 C10orf105Q8TEF2 133 aa12.53□□□□□ -0.4
SF3B5-201ENST00000367569 MARS2Q96GW9 593 aaKnown RBP12.53□□□□□ -0.4
SF3B5-201ENST00000367569 MAP6Q96JE9 813 aa12.53□□□□□ -0.4
SF3B5-201ENST00000367569 CDADC1Q9BWV3 514 aa12.53□□□□□ -0.4
SF3B5-201ENST00000367569 NMNAT2Q9BZQ4 307 aa12.53□□□□□ -0.4
SF3B5-201ENST00000367569 RAB1BQ9H0U4 201 aa12.53□□□□□ -0.4
SF3B5-201ENST00000367569 MMADHCQ9H3L0 296 aaPredicted RBP12.53□□□□□ -0.4
SF3B5-201ENST00000367569 PAPOLBQ9NRJ5 636 aaKnown RBP12.53□□□□□ -0.4
SF3B5-201ENST00000367569 CMC2Q9NRP2 79 aa12.53□□□□□ -0.4
SF3B5-201ENST00000367569 BAIAP2Q9UQB8 552 aa12.53□□□□□ -0.4
SF3B5-201ENST00000367569 TANC2Q9HCD6 1990 aa12.52□□□□□ -0.4
SF3B5-201ENST00000367569 ANXA8P13928 327 aa12.52□□□□□ -0.41
SF3B5-201ENST00000367569 DAOP14920 347 aa12.52□□□□□ -0.41
SF3B5-201ENST00000367569 ZNF250P15622 560 aa12.52□□□□□ -0.41
SF3B5-201ENST00000367569 ZNF823P16415 610 aa12.52□□□□□ -0.41
SF3B5-201ENST00000367569 FASP25445 335 aa12.52□□□□□ -0.41
SF3B5-201ENST00000367569 GCH1P30793 250 aa12.52□□□□□ -0.41
SF3B5-201ENST00000367569 PDLIM4P50479 330 aa12.52□□□□□ -0.41
SF3B5-201ENST00000367569 LOXL1Q08397 574 aaPredicted RBP12.52□□□□□ -0.41
SF3B5-201ENST00000367569 HLXQ14774 488 aaPredicted RBP12.52□□□□□ -0.41
SF3B5-201ENST00000367569 TSTQ16762 297 aaKnown RBP12.52□□□□□ -0.41
SF3B5-201ENST00000367569 CHRFAM7AQ494W8 412 aa12.52□□□□□ -0.41
SF3B5-201ENST00000367569 ELFN2Q5R3F8 820 aa12.52□□□□□ -0.41
SF3B5-201ENST00000367569 FAHD1Q6P587 224 aa12.52□□□□□ -0.41
SF3B5-201ENST00000367569 ERI1Q8IV48 349 aaKnown RBP12.52□□□□□ -0.41
SF3B5-201ENST00000367569 KLF14Q8TD94 323 aaPredicted RBP12.52□□□□□ -0.41
SF3B5-201ENST00000367569 SNX33Q8WV41 574 aa12.52□□□□□ -0.41
SF3B5-201ENST00000367569 ZMYND19Q96E35 227 aaPredicted RBP12.52□□□□□ -0.41
SF3B5-201ENST00000367569 PITX2Q99697 317 aa12.52□□□□□ -0.41
SF3B5-201ENST00000367569 HDHD2Q9H0R4 259 aa12.52□□□□□ -0.41
SF3B5-201ENST00000367569 OR51V1Q9H2C8 321 aa12.52□□□□□ -0.41
SF3B5-201ENST00000367569 HINT3Q9NQE9 182 aaKnown RBP12.52□□□□□ -0.41
SF3B5-201ENST00000367569 KRT84Q9NSB2 600 aa12.52□□□□□ -0.41
SF3B5-201ENST00000367569 STARD10Q9Y365 291 aa12.52□□□□□ -0.41
SF3B5-201ENST00000367569 MALRD1Q5VYJ5 2156 aa12.52□□□□□ -0.41
SF3B5-201ENST00000367569 IGLV3-9A0A075B6K5 115 aa12.51□□□□□ -0.41
SF3B5-201ENST00000367569 ZSCAN5BA6NJL1 495 aa12.51□□□□□ -0.41
SF3B5-201ENST00000367569 F5H5K5 113 aa12.51□□□□□ -0.41
SF3B5-201ENST00000367569 G3V2T6 193 aa12.51□□□□□ -0.41
SF3B5-201ENST00000367569 SURF4O15260 269 aa12.51□□□□□ -0.41
SF3B5-201ENST00000367569 SPRY3O43610 288 aa12.51□□□□□ -0.41
SF3B5-201ENST00000367569 CDC14BO60729 498 aa12.51□□□□□ -0.41
SF3B5-201ENST00000367569 SLC25A16P16260 332 aa12.51□□□□□ -0.41
SF3B5-201ENST00000367569 HOXB6P17509 224 aaKnown RBP12.51□□□□□ -0.41
SF3B5-201ENST00000367569 EPHA2P29317 976 aa12.51□□□□□ -0.41
SF3B5-201ENST00000367569 NAA10P41227 235 aaPredicted RBP12.51□□□□□ -0.41
SF3B5-201ENST00000367569 ARHGDIAP52565 204 aa12.51□□□□□ -0.41
SF3B5-201ENST00000367569 HIST1H3AP68431 136 aa12.51□□□□□ -0.41
SF3B5-201ENST00000367569 CCL8P80075 99 aa12.51□□□□□ -0.41
SF3B5-201ENST00000367569 KLHL12Q53G59 568 aa12.51□□□□□ -0.41
SF3B5-201ENST00000367569 SPRNQ5BIV9 151 aa12.51□□□□□ -0.41
SF3B5-201ENST00000367569 HIST2H3PS2Q5TEC6 136 aa12.51□□□□□ -0.41
SF3B5-201ENST00000367569 LINC01590Q5TEZ4 76 aa12.51□□□□□ -0.41
SF3B5-201ENST00000367569 HIST2H3AQ71DI3 136 aa12.51□□□□□ -0.41
SF3B5-201ENST00000367569 DCXRQ7Z4W1 244 aa12.51□□□□□ -0.41
SF3B5-201ENST00000367569 OR5AS1Q8N127 324 aa12.51□□□□□ -0.41
SF3B5-201ENST00000367569 GJC3Q8NFK1 279 aa12.51□□□□□ -0.41
SF3B5-201ENST00000367569 OR6N2Q8NGY6 317 aa12.51□□□□□ -0.41
SF3B5-201ENST00000367569 ATF6BQ99941 703 aa12.51□□□□□ -0.41
SF3B5-201ENST00000367569 PKP2Q99959 881 aa12.51□□□□□ -0.41
SF3B5-201ENST00000367569 PIMREGQ9BSJ6 248 aa12.51□□□□□ -0.41
SF3B5-201ENST00000367569 REPIN1Q9BWE0 567 aaKnown RBP12.51□□□□□ -0.41
SF3B5-201ENST00000367569 BPESC1Q9GZL8 116 aa12.51□□□□□ -0.41
SF3B5-201ENST00000367569 NARFLQ9H6Q4 476 aa12.51□□□□□ -0.41
SF3B5-201ENST00000367569 MSL2Q9HCI7 577 aa12.51□□□□□ -0.41
SF3B5-201ENST00000367569 PNRC2Q9NPJ4 139 aaKnown RBP12.51□□□□□ -0.41
SF3B5-201ENST00000367569 TREM2Q9NZC2 230 aa12.51□□□□□ -0.41
SF3B5-201ENST00000367569 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.51□□□□□ -0.41
SF3B5-201ENST00000367569 CYB5R1Q9UHQ9 305 aa12.51□□□□□ -0.41
SF3B5-201ENST00000367569 OAZ3Q9UMX2 235 aa12.51□□□□□ -0.41
SF3B5-201ENST00000367569 C5orf63A6NC05 138 aa12.5□□□□□ -0.41
SF3B5-201ENST00000367569 RNF212BA8MTL3 300 aa12.5□□□□□ -0.41
SF3B5-201ENST00000367569 H3BNX3 289 aa12.5□□□□□ -0.41
SF3B5-201ENST00000367569 TPD52L2O43399 206 aaKnown RBP12.5□□□□□ -0.41
SF3B5-201ENST00000367569 TIMM8AO60220 97 aaPredicted RBP12.5□□□□□ -0.41
SF3B5-201ENST00000367569 SELENOFO60613 162 aa12.5□□□□□ -0.41
SF3B5-201ENST00000367569 IFNA2P01563 188 aa12.5□□□□□ -0.41
SF3B5-201ENST00000367569 ERCC1P07992 297 aaPredicted RBP12.5□□□□□ -0.41
SF3B5-201ENST00000367569 COX5BP10606 129 aa12.5□□□□□ -0.41
SF3B5-201ENST00000367569 SLC2A1P11166 492 aa12.5□□□□□ -0.41
SF3B5-201ENST00000367569 ENTPD1P49961 510 aa12.5□□□□□ -0.41
SF3B5-201ENST00000367569 SLC25A1P53007 311 aa12.5□□□□□ -0.41
SF3B5-201ENST00000367569 ACTR3P61158 418 aa12.5□□□□□ -0.41
SF3B5-201ENST00000367569 RPS7P62081 194 aaKnown RBP12.5□□□□□ -0.41
SF3B5-201ENST00000367569 TRIP10Q15642 601 aa12.5□□□□□ -0.41
SF3B5-201ENST00000367569 ZNF718Q3SXZ3 478 aa12.5□□□□□ -0.41
SF3B5-201ENST00000367569 ZNF771Q7L3S4 317 aaPredicted RBP12.5□□□□□ -0.41
SF3B5-201ENST00000367569 BCDIN3DQ7Z5W3 292 aaKnown RBP12.5□□□□□ -0.41
SF3B5-201ENST00000367569 NAA40Q86UY6 237 aa12.5□□□□□ -0.41
SF3B5-201ENST00000367569 CPOQ8IVL8 374 aa12.5□□□□□ -0.41
SF3B5-201ENST00000367569 PHC2Q8IXK0 858 aa12.5□□□□□ -0.41
SF3B5-201ENST00000367569 YIPF5Q969M3 257 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms