RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 SMIM3Q9BZL3 60 aa10.73□□□□□ -0.69
CDC42BPA-202ENST00000366764 ADGRL4Q9HBW9 690 aa10.73□□□□□ -0.69
CDC42BPA-202ENST00000366764 SPHK1Q9NYA1 384 aa10.73□□□□□ -0.69
CDC42BPA-202ENST00000366764 TP53TG5Q9Y2B4 290 aa10.73□□□□□ -0.69
CDC42BPA-202ENST00000366764 PRRT4C9JH25 899 aa10.73□□□□□ -0.69
CDC42BPA-202ENST00000366764 FCGR2AP12318 317 aa10.73□□□□□ -0.69
CDC42BPA-202ENST00000366764 DCDP81605 110 aaKnown RBP10.73□□□□□ -0.69
CDC42BPA-202ENST00000366764 BOLLQ8N9W6 283 aaKnown RBP10.73□□□□□ -0.69
CDC42BPA-202ENST00000366764 OR1J1Q8NGS3 322 aa10.73□□□□□ -0.69
CDC42BPA-202ENST00000366764 C14orf79Q96F83 325 aa10.73□□□□□ -0.69
CDC42BPA-202ENST00000366764 AUNIPQ9H7T9 357 aa10.73□□□□□ -0.69
CDC42BPA-202ENST00000366764 PRDM7Q9NQW5 492 aa10.73□□□□□ -0.69
CDC42BPA-202ENST00000366764 DLL4Q9NR61 685 aa10.73□□□□□ -0.69
CDC42BPA-202ENST00000366764 SIRT3Q9NTG7 399 aaPredicted RBP10.73□□□□□ -0.69
CDC42BPA-202ENST00000366764 FRG2CA6NGY1 282 aa10.73□□□□□ -0.69
CDC42BPA-202ENST00000366764 CNOT4O95628 575 aaKnown RBP10.73□□□□□ -0.69
CDC42BPA-202ENST00000366764 SEMG1P04279 462 aa10.73□□□□□ -0.69
CDC42BPA-202ENST00000366764 NME2P22392 152 aa10.73□□□□□ -0.69
CDC42BPA-202ENST00000366764 CCR5P51681 352 aa10.73□□□□□ -0.69
CDC42BPA-202ENST00000366764 DEGS2Q6QHC5 323 aa10.73□□□□□ -0.69
CDC42BPA-202ENST00000366764 NANPQ8TBE9 248 aa10.73□□□□□ -0.69
CDC42BPA-202ENST00000366764 MT-ND4LP03901 98 aa10.73□□□□□ -0.69
CDC42BPA-202ENST00000366764 GPNMBQ14956 572 aa10.73□□□□□ -0.69
CDC42BPA-202ENST00000366764 DND1Q8IYX4 353 aaKnown RBP10.73□□□□□ -0.69
CDC42BPA-202ENST00000366764 MORN4Q8NDC4 146 aa10.73□□□□□ -0.69
CDC42BPA-202ENST00000366764 OR1E3Q8WZA6 343 aa10.73□□□□□ -0.69
CDC42BPA-202ENST00000366764 UBL7Q96S82 380 aaPredicted RBP10.73□□□□□ -0.69
CDC42BPA-202ENST00000366764 OTOSQ8NHW6 89 aa10.73□□□□□ -0.69
CDC42BPA-202ENST00000366764 LHX6Q9UPM6 363 aa10.73□□□□□ -0.69
CDC42BPA-202ENST00000366764 DPP4P27487 766 aa10.73□□□□□ -0.69
CDC42BPA-202ENST00000366764 PNLIPRP2P54317 469 aa10.73□□□□□ -0.69
CDC42BPA-202ENST00000366764 RNF212Q495C1 297 aa10.73□□□□□ -0.69
CDC42BPA-202ENST00000366764 ZBTB44Q8NCP5 570 aa10.73□□□□□ -0.69
CDC42BPA-202ENST00000366764 OR52N5Q8NH56 324 aa10.73□□□□□ -0.69
CDC42BPA-202ENST00000366764 ZNF681Q96N22 645 aa10.73□□□□□ -0.69
CDC42BPA-202ENST00000366764 YKT6O15498 198 aa10.72□□□□□ -0.69
CDC42BPA-202ENST00000366764 LINC00303Q3SY05 128 aa10.72□□□□□ -0.69
CDC42BPA-202ENST00000366764 PMP2P02689 132 aa10.72□□□□□ -0.69
CDC42BPA-202ENST00000366764 CD3DP04234 171 aa10.72□□□□□ -0.69
CDC42BPA-202ENST00000366764 C2orf76Q3KRA6 126 aa10.72□□□□□ -0.69
CDC42BPA-202ENST00000366764 PLXNA3P51805 1871 aa10.72□□□□□ -0.69
CDC42BPA-202ENST00000366764 OR6C65A6NJZ3 312 aa10.72□□□□□ -0.69
CDC42BPA-202ENST00000366764 ARF1P84077 181 aaKnown RBP10.72□□□□□ -0.69
CDC42BPA-202ENST00000366764 CATR1Q13166 79 aa10.72□□□□□ -0.69
CDC42BPA-202ENST00000366764 FAM27D1Q5T7N8 215 aa10.72□□□□□ -0.69
CDC42BPA-202ENST00000366764 TANGO2Q6ICL3 276 aa10.72□□□□□ -0.69
CDC42BPA-202ENST00000366764 TMEM81Q6P7N7 255 aa10.72□□□□□ -0.69
CDC42BPA-202ENST00000366764 PPP1R3BQ86XI6 285 aa10.72□□□□□ -0.69
CDC42BPA-202ENST00000366764 GPX8Q8TED1 209 aa10.72□□□□□ -0.69
CDC42BPA-202ENST00000366764 PUS1Q9Y606 427 aaKnown RBP eCLIP10.72□□□□□ -0.69
CDC42BPA-202ENST00000366764 PRAMEF25A6NGN4 478 aa10.72□□□□□ -0.69
CDC42BPA-202ENST00000366764 FFAR1O14842 300 aa10.72□□□□□ -0.69
CDC42BPA-202ENST00000366764 B4GALT3O60512 393 aa10.72□□□□□ -0.69
CDC42BPA-202ENST00000366764 F10P00742 488 aa10.72□□□□□ -0.69
CDC42BPA-202ENST00000366764 HPNP05981 417 aa10.72□□□□□ -0.69
CDC42BPA-202ENST00000366764 BTG2P78543 158 aa10.72□□□□□ -0.69
CDC42BPA-202ENST00000366764 OR1S2Q8NGQ3 325 aa10.72□□□□□ -0.69
CDC42BPA-202ENST00000366764 OR10R2Q8NGX6 335 aa10.72□□□□□ -0.69
CDC42BPA-202ENST00000366764 PPP1R1CQ8WVI7 109 aa10.72□□□□□ -0.69
CDC42BPA-202ENST00000366764 LINC00862A6NCI5 91 aa10.72□□□□□ -0.69
CDC42BPA-202ENST00000366764 OR7C1O76099 320 aaPredicted RBP10.72□□□□□ -0.69
CDC42BPA-202ENST00000366764 ZFPL1O95159 310 aa10.72□□□□□ -0.69
CDC42BPA-202ENST00000366764 CA13Q8N1Q1 262 aa10.72□□□□□ -0.69
CDC42BPA-202ENST00000366764 TCEAL2Q9H3H9 227 aaPredicted RBP10.72□□□□□ -0.69
CDC42BPA-202ENST00000366764 RIMS4Q9H426 269 aaPredicted RBP10.72□□□□□ -0.69
CDC42BPA-202ENST00000366764 NOTCH3Q9UM47 2321 aa10.72□□□□□ -0.69
CDC42BPA-202ENST00000366764 A6NLC8 198 aa10.72□□□□□ -0.69
CDC42BPA-202ENST00000366764 OR2W3Q7Z3T1 314 aa10.72□□□□□ -0.69
CDC42BPA-202ENST00000366764 PLEKHA3Q9HB20 300 aa10.72□□□□□ -0.69
CDC42BPA-202ENST00000366764 CDC14CA4D256 554 aa10.72□□□□□ -0.69
CDC42BPA-202ENST00000366764 HIST2H3PS2Q5TEC6 136 aa10.72□□□□□ -0.69
CDC42BPA-202ENST00000366764 LRIT1Q9P2V4 623 aa10.72□□□□□ -0.69
CDC42BPA-202ENST00000366764 POLEQ07864 2286 aa10.72□□□□□ -0.69
CDC42BPA-202ENST00000366764 ZNF626Q68DY1 528 aa10.72□□□□□ -0.69
CDC42BPA-202ENST00000366764 C1orf87Q8N0U7 546 aa10.72□□□□□ -0.69
CDC42BPA-202ENST00000366764 C9orf62Q8N4C0 152 aa10.72□□□□□ -0.69
CDC42BPA-202ENST00000366764 SLC38A9Q8NBW4 561 aa10.72□□□□□ -0.69
CDC42BPA-202ENST00000366764 WDR89Q96FK6 387 aaPredicted RBP10.72□□□□□ -0.69
CDC42BPA-202ENST00000366764 AP1S3Q96PC3 154 aa10.72□□□□□ -0.69
CDC42BPA-202ENST00000366764 CACFD1Q9UGQ2 172 aa10.72□□□□□ -0.69
CDC42BPA-202ENST00000366764 CD207Q9UJ71 328 aa10.72□□□□□ -0.69
CDC42BPA-202ENST00000366764 PIGLQ9Y2B2 252 aa10.72□□□□□ -0.69
CDC42BPA-202ENST00000366764 PYCARD-AS1I3L0S3 204 aa10.71□□□□□ -0.69
CDC42BPA-202ENST00000366764 GP1BAP07359 652 aa10.71□□□□□ -0.69
CDC42BPA-202ENST00000366764 POU3F2P20265 443 aaPredicted RBP10.71□□□□□ -0.69
CDC42BPA-202ENST00000366764 CTHP32929 405 aa10.71□□□□□ -0.69
CDC42BPA-202ENST00000366764 RPS18P62269 152 aaKnown RBP10.71□□□□□ -0.69
CDC42BPA-202ENST00000366764 PCNPQ8WW12 178 aaKnown RBP10.71□□□□□ -0.69
CDC42BPA-202ENST00000366764 MAP3K3Q99759 626 aa10.71□□□□□ -0.69
CDC42BPA-202ENST00000366764 ULBP3Q9BZM4 244 aa10.71□□□□□ -0.69
CDC42BPA-202ENST00000366764 FASLGP48023 281 aa10.71□□□□□ -0.69
CDC42BPA-202ENST00000366764 ZNF793Q6ZN11 406 aa10.71□□□□□ -0.69
CDC42BPA-202ENST00000366764 SLC23A2Q9UGH3 650 aa10.71□□□□□ -0.69
CDC42BPA-202ENST00000366764 C7orf66A4D0T2 115 aa10.71□□□□□ -0.69
CDC42BPA-202ENST00000366764 C17orf112F2Z3M2 114 aa10.71□□□□□ -0.69
CDC42BPA-202ENST00000366764 SSR4P51571 173 aa10.71□□□□□ -0.69
CDC42BPA-202ENST00000366764 TFAP2EQ6VUC0 442 aa10.71□□□□□ -0.69
CDC42BPA-202ENST00000366764 C17orf107Q6ZR85 190 aa10.71□□□□□ -0.69
CDC42BPA-202ENST00000366764 TMEFF1Q8IYR6 380 aa10.71□□□□□ -0.69
CDC42BPA-202ENST00000366764 ZC3H12DA2A288 527 aaKnown RBP10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms