RNA–Protein interactions for RNA: ENST00000364007.1

RNU6-560P-201, Transcript of RNA, U6 small nuclear 560, pseudogene, humanhuman

BASIC

Gene RNU6-560P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-560P-201ENST00000364007 C5orf63A6NC05 138 aa2.32□□□□□ -2.04
RNU6-560P-201ENST00000364007 TRIM64CA6NLI5 447 aa2.32□□□□□ -2.04
RNU6-560P-201ENST00000364007 RPL36A-HNRNPH2H7BZ11 118 aa2.32□□□□□ -2.04
RNU6-560P-201ENST00000364007 K7EM74 188 aa2.32□□□□□ -2.04
RNU6-560P-201ENST00000364007 NDUFAB1O14561 156 aa2.32□□□□□ -2.04
RNU6-560P-201ENST00000364007 HLA-DQA1P01909 254 aa2.32□□□□□ -2.04
RNU6-560P-201ENST00000364007 CTSLP07711 333 aa2.32□□□□□ -2.04
RNU6-560P-201ENST00000364007 OR8U9P0C7N5 309 aa2.32□□□□□ -2.04
RNU6-560P-201ENST00000364007 ZNF14P17017 642 aaPredicted RBP2.32□□□□□ -2.04
RNU6-560P-201ENST00000364007 OR1E1P30953 314 aa2.32□□□□□ -2.04
RNU6-560P-201ENST00000364007 OPRK1P41145 380 aa2.32□□□□□ -2.04
RNU6-560P-201ENST00000364007 PPP1CBP62140 327 aa2.32□□□□□ -2.04
RNU6-560P-201ENST00000364007 BEX3Q00994 111 aa2.32□□□□□ -2.04
RNU6-560P-201ENST00000364007 CDC20Q12834 499 aa2.32□□□□□ -2.04
RNU6-560P-201ENST00000364007 QPRTQ15274 297 aa2.32□□□□□ -2.04
RNU6-560P-201ENST00000364007 KRTAP13-2Q52LG2 175 aa2.32□□□□□ -2.04
RNU6-560P-201ENST00000364007 UBE2UQ5VVX9 321 aa2.32□□□□□ -2.04
RNU6-560P-201ENST00000364007 NPSR1Q6W5P4 371 aa2.32□□□□□ -2.04
RNU6-560P-201ENST00000364007 CDKL3Q8IVW4 592 aaPredicted RBP2.32□□□□□ -2.04
RNU6-560P-201ENST00000364007 OSR2Q8N2R0 312 aa2.32□□□□□ -2.04
RNU6-560P-201ENST00000364007 COX18Q8N8Q8 333 aa2.32□□□□□ -2.04
RNU6-560P-201ENST00000364007 C11orf72Q8NBR9 251 aa2.32□□□□□ -2.04
RNU6-560P-201ENST00000364007 OR52E2Q8NGJ4 325 aa2.32□□□□□ -2.04
RNU6-560P-201ENST00000364007 ZNF721Q8TF20 911 aa2.32□□□□□ -2.04
RNU6-560P-201ENST00000364007 TMEM230Q96A57 120 aa2.32□□□□□ -2.04
RNU6-560P-201ENST00000364007 PTX4Q96A99 478 aa2.32□□□□□ -2.04
RNU6-560P-201ENST00000364007 ZNF488Q96MN9 340 aa2.32□□□□□ -2.04
RNU6-560P-201ENST00000364007 MYCBPQ99417 103 aaPredicted RBP2.32□□□□□ -2.04
RNU6-560P-201ENST00000364007 CTRCQ99895 268 aa2.32□□□□□ -2.04
RNU6-560P-201ENST00000364007 TIMM29Q9BSF4 260 aa2.32□□□□□ -2.04
RNU6-560P-201ENST00000364007 KRTAP4-3Q9BYR4 195 aa2.32□□□□□ -2.04
RNU6-560P-201ENST00000364007 TMEM185BQ9H7F4 350 aa2.32□□□□□ -2.04
RNU6-560P-201ENST00000364007 NEK6Q9HC98 313 aa2.32□□□□□ -2.04
RNU6-560P-201ENST00000364007 ZNF160Q9HCG1 818 aa2.32□□□□□ -2.04
RNU6-560P-201ENST00000364007 WIF1Q9Y5W5 379 aa2.32□□□□□ -2.04
RNU6-560P-201ENST00000364007 TRBV9A0A0B4J1U6 114 aa2.31□□□□□ -2.04
RNU6-560P-201ENST00000364007 TRAV40A0A0B4J280 105 aa2.31□□□□□ -2.04
RNU6-560P-201ENST00000364007 CTAGE15A4D2H0 777 aa2.31□□□□□ -2.04
RNU6-560P-201ENST00000364007 NCBP2LA6PVI3 153 aaKnown RBP2.31□□□□□ -2.04
RNU6-560P-201ENST00000364007 K7EMT4 169 aa2.31□□□□□ -2.04
RNU6-560P-201ENST00000364007 BPY2O14599 106 aa2.31□□□□□ -2.04
RNU6-560P-201ENST00000364007 SCAMP2O15127 329 aaKnown RBP2.31□□□□□ -2.04
RNU6-560P-201ENST00000364007 NVLO15381 856 aaKnown RBP2.31□□□□□ -2.04
RNU6-560P-201ENST00000364007 SOCS1O15524 211 aa2.31□□□□□ -2.04
RNU6-560P-201ENST00000364007 REM1O75628 298 aa2.31□□□□□ -2.04
RNU6-560P-201ENST00000364007 RCBTB2O95199 551 aa2.31□□□□□ -2.04
RNU6-560P-201ENST00000364007 CCNE2O96020 404 aa2.31□□□□□ -2.04
RNU6-560P-201ENST00000364007 MYL2P10916 166 aa2.31□□□□□ -2.04
RNU6-560P-201ENST00000364007 BCKDHBP21953 392 aa2.31□□□□□ -2.04
RNU6-560P-201ENST00000364007 U2AF2P26368 475 aaKnown RBP eCLIP2.31□□□□□ -2.04
RNU6-560P-201ENST00000364007 GTF2E2P29084 291 aaKnown RBP2.31□□□□□ -2.04
RNU6-560P-201ENST00000364007 CXCL12P48061 93 aa2.31□□□□□ -2.04
RNU6-560P-201ENST00000364007 C21orf59P57076 290 aa2.31□□□□□ -2.04
RNU6-560P-201ENST00000364007 RGS8P57771 180 aaPredicted RBP2.31□□□□□ -2.04
RNU6-560P-201ENST00000364007 RPS23P62266 143 aaKnown RBP2.31□□□□□ -2.04
RNU6-560P-201ENST00000364007 SEMG2Q02383 582 aa2.31□□□□□ -2.04
RNU6-560P-201ENST00000364007 ZNF266Q14584 549 aa2.31□□□□□ -2.04
RNU6-560P-201ENST00000364007 TRAM2Q15035 370 aa2.31□□□□□ -2.04
RNU6-560P-201ENST00000364007 PSMD5Q16401 504 aa2.31□□□□□ -2.04
RNU6-560P-201ENST00000364007 AVPI1Q5T686 147 aa2.31□□□□□ -2.04
RNU6-560P-201ENST00000364007 ZFP1Q6P2D0 407 aa2.31□□□□□ -2.04
RNU6-560P-201ENST00000364007 CTAGE6Q86UF2 777 aa2.31□□□□□ -2.04
RNU6-560P-201ENST00000364007 CHST4Q8NCG5 386 aa2.31□□□□□ -2.04
RNU6-560P-201ENST00000364007 OR52P1PQ8NH57 321 aa2.31□□□□□ -2.04
RNU6-560P-201ENST00000364007 LINC01560Q8TB33 94 aa2.31□□□□□ -2.04
RNU6-560P-201ENST00000364007 FAM81AQ8TBF8 368 aa2.31□□□□□ -2.04
RNU6-560P-201ENST00000364007 RMI2Q96E14 147 aa2.31□□□□□ -2.04
RNU6-560P-201ENST00000364007 PRRC1Q96M27 445 aa2.31□□□□□ -2.04
RNU6-560P-201ENST00000364007 ZNF317Q96PQ6 595 aaPredicted RBP2.31□□□□□ -2.04
RNU6-560P-201ENST00000364007 TGS1Q96RS0 853 aaKnown RBP2.31□□□□□ -2.04
RNU6-560P-201ENST00000364007 ANKRD60Q9BZ19 345 aa2.31□□□□□ -2.04
RNU6-560P-201ENST00000364007 FGF23Q9GZV9 251 aaPredicted RBP2.31□□□□□ -2.04
RNU6-560P-201ENST00000364007 AGPAT4Q9NRZ5 378 aa2.31□□□□□ -2.04
RNU6-560P-201ENST00000364007 COL1A2P08123 1366 aa2.31□□□□□ -2.04
RNU6-560P-201ENST00000364007 IGHV1OR15-9A0A0B4J2B8 117 aa2.3□□□□□ -2.04
RNU6-560P-201ENST00000364007 H0YJW9 148 aa2.3□□□□□ -2.04
RNU6-560P-201ENST00000364007 TEX46H3BTG2 121 aa2.3□□□□□ -2.04
RNU6-560P-201ENST00000364007 H7C1H1 209 aa2.3□□□□□ -2.04
RNU6-560P-201ENST00000364007 DNASE2O00115 360 aaPredicted RBP2.3□□□□□ -2.04
RNU6-560P-201ENST00000364007 SLC9A3R1O14745 358 aaPredicted RBP2.3□□□□□ -2.04
RNU6-560P-201ENST00000364007 HUS1O60921 280 aa2.3□□□□□ -2.04
RNU6-560P-201ENST00000364007 OR2F2O95006 317 aa2.3□□□□□ -2.04
RNU6-560P-201ENST00000364007 POLR2MP0CAP2 368 aa2.3□□□□□ -2.04
RNU6-560P-201ENST00000364007 CT45A6P0DMU7 189 aa2.3□□□□□ -2.04
RNU6-560P-201ENST00000364007 CT45A5P0DMU8 189 aa2.3□□□□□ -2.04
RNU6-560P-201ENST00000364007 CT45A7P0DMV0 189 aa2.3□□□□□ -2.04
RNU6-560P-201ENST00000364007 C1GALT1C1LP0DN25 315 aa2.3□□□□□ -2.04
RNU6-560P-201ENST00000364007 ERGP11308 486 aa2.3□□□□□ -2.04
RNU6-560P-201ENST00000364007 OTX1P32242 354 aaPredicted RBP2.3□□□□□ -2.04
RNU6-560P-201ENST00000364007 CACNG7P62955 275 aa2.3□□□□□ -2.04
RNU6-560P-201ENST00000364007 PRR3P79522 188 aaKnown RBP2.3□□□□□ -2.04
RNU6-560P-201ENST00000364007 IDI1Q13907 227 aa2.3□□□□□ -2.04
RNU6-560P-201ENST00000364007 DGCR6Q14129 220 aa2.3□□□□□ -2.04
RNU6-560P-201ENST00000364007 RCN1Q15293 331 aa2.3□□□□□ -2.04
RNU6-560P-201ENST00000364007 PRSS8Q16651 343 aa2.3□□□□□ -2.04
RNU6-560P-201ENST00000364007 CHRFAM7AQ494W8 412 aa2.3□□□□□ -2.04
RNU6-560P-201ENST00000364007 CT45A1Q5HYN5 189 aa2.3□□□□□ -2.04
RNU6-560P-201ENST00000364007 SLC16A13Q7RTY0 426 aa2.3□□□□□ -2.04
RNU6-560P-201ENST00000364007 NEGR1Q7Z3B1 354 aa2.3□□□□□ -2.04
RNU6-560P-201ENST00000364007 SNX20Q7Z614 316 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms