RNA–Protein interactions for RNA: ENST00000363313.1

RNU6-238P-201, Transcript of RNA, U6 small nuclear 238, pseudogene, humanhuman

BASIC

Gene RNU6-238P, Length 106 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-238P-201ENST00000363313 SCO1O75880 301 aa-0.39□□□□□ -2.47
RNU6-238P-201ENST00000363313 ERLIN2O94905 339 aa-0.39□□□□□ -2.47
RNU6-238P-201ENST00000363313 RAB36O95755 333 aa-0.39□□□□□ -2.47
RNU6-238P-201ENST00000363313 NAPSAO96009 420 aa-0.39□□□□□ -2.47
RNU6-238P-201ENST00000363313 IGHV1-46P01743 117 aa-0.39□□□□□ -2.47
RNU6-238P-201ENST00000363313 RPN2P04844 631 aa-0.39□□□□□ -2.47
RNU6-238P-201ENST00000363313 CTRB1P17538 263 aa-0.39□□□□□ -2.47
RNU6-238P-201ENST00000363313 NELFEP18615 380 aaKnown RBP-0.39□□□□□ -2.47
RNU6-238P-201ENST00000363313 MUTP22033 750 aa-0.39□□□□□ -2.47
RNU6-238P-201ENST00000363313 CEACAM3P40198 252 aa-0.39□□□□□ -2.47
RNU6-238P-201ENST00000363313 VHLP40337 213 aa-0.39□□□□□ -2.47
RNU6-238P-201ENST00000363313 FBXW4P57775 412 aa-0.39□□□□□ -2.47
RNU6-238P-201ENST00000363313 CBX3Q13185 183 aa-0.39□□□□□ -2.47
RNU6-238P-201ENST00000363313 LUZP6Q538Z0 58 aa-0.39□□□□□ -2.47
RNU6-238P-201ENST00000363313 KCNIP4Q6PIL6 250 aa-0.39□□□□□ -2.47
RNU6-238P-201ENST00000363313 SLC38A6Q8IZM9 456 aa-0.39□□□□□ -2.47
RNU6-238P-201ENST00000363313 COX18Q8N8Q8 333 aa-0.39□□□□□ -2.47
RNU6-238P-201ENST00000363313 OR10T2Q8NGX3 314 aa-0.39□□□□□ -2.47
RNU6-238P-201ENST00000363313 OR10G6Q8NH81 332 aa-0.39□□□□□ -2.47
RNU6-238P-201ENST00000363313 C10orf105Q8TEF2 133 aa-0.39□□□□□ -2.47
RNU6-238P-201ENST00000363313 UBE2Q2Q8WVN8 375 aa-0.39□□□□□ -2.47
RNU6-238P-201ENST00000363313 OR5P3Q8WZ94 311 aa-0.39□□□□□ -2.47
RNU6-238P-201ENST00000363313 SAMD8Q96LT4 415 aa-0.39□□□□□ -2.47
RNU6-238P-201ENST00000363313 ATP6V0BQ99437 205 aa-0.39□□□□□ -2.47
RNU6-238P-201ENST00000363313 CXCL16Q9H2A7 254 aa-0.39□□□□□ -2.47
RNU6-238P-201ENST00000363313 FAM206AQ9NX38 181 aa-0.39□□□□□ -2.47
RNU6-238P-201ENST00000363313 CWC25Q9NXE8 425 aaPredicted RBP-0.39□□□□□ -2.47
RNU6-238P-201ENST00000363313 PDP1Q9P0J1 537 aaPredicted RBP-0.39□□□□□ -2.47
RNU6-238P-201ENST00000363313 ADGRB3O60242 1522 aa-0.39□□□□□ -2.47
RNU6-238P-201ENST00000363313 NEBP20929 6669 aa-0.4□□□□□ -2.47
RNU6-238P-201ENST00000363313 CHADO15335 359 aa-0.4□□□□□ -2.47
RNU6-238P-201ENST00000363313 OR7A10O76100 309 aa-0.4□□□□□ -2.47
RNU6-238P-201ENST00000363313 KRT14P02533 472 aa-0.4□□□□□ -2.47
RNU6-238P-201ENST00000363313 ETS1P14921 441 aa-0.4□□□□□ -2.47
RNU6-238P-201ENST00000363313 HMGB2P26583 209 aaKnown RBP-0.4□□□□□ -2.47
RNU6-238P-201ENST00000363313 CCR1P32246 355 aa-0.4□□□□□ -2.47
RNU6-238P-201ENST00000363313 ATP5C1P36542 298 aaKnown RBP-0.4□□□□□ -2.47
RNU6-238P-201ENST00000363313 TMED10P49755 219 aaKnown RBP-0.4□□□□□ -2.47
RNU6-238P-201ENST00000363313 RPL23P62829 140 aaKnown RBP-0.4□□□□□ -2.47
RNU6-238P-201ENST00000363313 ELF3P78545 371 aaPredicted RBP-0.4□□□□□ -2.47
RNU6-238P-201ENST00000363313 TWF1Q12792 350 aa-0.4□□□□□ -2.47
RNU6-238P-201ENST00000363313 FAM104BQ5XKR9 115 aa-0.4□□□□□ -2.47
RNU6-238P-201ENST00000363313 ZNF767PQ75MW2 155 aa-0.4□□□□□ -2.47
RNU6-238P-201ENST00000363313 CCDC80Q76M96 950 aa-0.4□□□□□ -2.47
RNU6-238P-201ENST00000363313 OR4K13Q8NH42 304 aa-0.4□□□□□ -2.47
RNU6-238P-201ENST00000363313 SAMD10Q9BYL1 202 aa-0.4□□□□□ -2.47
RNU6-238P-201ENST00000363313 LRRN3Q9H3W5 708 aa-0.4□□□□□ -2.47
RNU6-238P-201ENST00000363313 INIPQ9NRY2 104 aa-0.4□□□□□ -2.47
RNU6-238P-201ENST00000363313 TIMM10BQ9Y5J6 103 aa-0.4□□□□□ -2.47
RNU6-238P-201ENST00000363313 ATP10AO60312 1499 aa-0.41□□□□□ -2.47
RNU6-238P-201ENST00000363313 GGTLC3B5MD39 225 aa-0.41□□□□□ -2.48
RNU6-238P-201ENST00000363313 TNFRSF11BO00300 401 aa-0.41□□□□□ -2.48
RNU6-238P-201ENST00000363313 DYNC1I1O14576 645 aa-0.41□□□□□ -2.48
RNU6-238P-201ENST00000363313 TAAR5O14804 337 aa-0.41□□□□□ -2.48
RNU6-238P-201ENST00000363313 FCMRO60667 390 aa-0.41□□□□□ -2.48
RNU6-238P-201ENST00000363313 GATBO75879 557 aaKnown RBP-0.41□□□□□ -2.48
RNU6-238P-201ENST00000363313 DIRAS1O95057 198 aa-0.41□□□□□ -2.48
RNU6-238P-201ENST00000363313 MFN2O95140 757 aa-0.41□□□□□ -2.48
RNU6-238P-201ENST00000363313 CD28P10747 220 aa-0.41□□□□□ -2.48
RNU6-238P-201ENST00000363313 GZMAP12544 262 aa-0.41□□□□□ -2.48
RNU6-238P-201ENST00000363313 CHMLP26374 656 aa-0.41□□□□□ -2.48
RNU6-238P-201ENST00000363313 NUCB2P80303 420 aa-0.41□□□□□ -2.48
RNU6-238P-201ENST00000363313 MXD1Q05195 221 aa-0.41□□□□□ -2.48
RNU6-238P-201ENST00000363313 AP1B1Q10567 949 aa-0.41□□□□□ -2.48
RNU6-238P-201ENST00000363313 PDZK1IP1Q13113 114 aa-0.41□□□□□ -2.48
RNU6-238P-201ENST00000363313 CUL2Q13617 745 aa-0.41□□□□□ -2.48
RNU6-238P-201ENST00000363313 SLC25A35Q3KQZ1 300 aa-0.41□□□□□ -2.48
RNU6-238P-201ENST00000363313 LDLRAD2Q5SZI1 272 aa-0.41□□□□□ -2.48
RNU6-238P-201ENST00000363313 FAM131AQ6UXB0 335 aa-0.41□□□□□ -2.48
RNU6-238P-201ENST00000363313 RPRMLQ8N4K4 120 aa-0.41□□□□□ -2.48
RNU6-238P-201ENST00000363313 MAGEE2Q8TD90 523 aaPredicted RBP-0.41□□□□□ -2.48
RNU6-238P-201ENST00000363313 TTC25Q96NG3 672 aa-0.41□□□□□ -2.48
RNU6-238P-201ENST00000363313 SECISBP2Q96T21 854 aaKnown RBP-0.41□□□□□ -2.48
RNU6-238P-201ENST00000363313 SPASTQ9UBP0 616 aa-0.41□□□□□ -2.48
RNU6-238P-201ENST00000363313 SLC7A8Q9UHI5 535 aa-0.41□□□□□ -2.48
RNU6-238P-201ENST00000363313 CTNNA3Q9UI47 895 aa-0.41□□□□□ -2.48
RNU6-238P-201ENST00000363313 SH3BGRL2Q9UJC5 107 aa-0.41□□□□□ -2.48
RNU6-238P-201ENST00000363313 SDK1Q7Z5N4 2213 aa-0.41□□□□□ -2.48
RNU6-238P-201ENST00000363313 GABRR3A8MPY1 467 aa-0.42□□□□□ -2.48
RNU6-238P-201ENST00000363313 A8MWL6 223 aa-0.42□□□□□ -2.48
RNU6-238P-201ENST00000363313 H3BQ85 93 aa-0.42□□□□□ -2.48
RNU6-238P-201ENST00000363313 KERAO60938 352 aa-0.42□□□□□ -2.48
RNU6-238P-201ENST00000363313 BCAS2O75934 225 aaPredicted RBP-0.42□□□□□ -2.48
RNU6-238P-201ENST00000363313 KCNK2O95069 426 aa-0.42□□□□□ -2.48
RNU6-238P-201ENST00000363313 IGHMP01871 453 aa-0.42□□□□□ -2.48
RNU6-238P-201ENST00000363313 MAGEA3P43357 314 aa-0.42□□□□□ -2.48
RNU6-238P-201ENST00000363313 CMC4P56277 68 aaPredicted RBP-0.42□□□□□ -2.48
RNU6-238P-201ENST00000363313 TAS2R43P59537 309 aa-0.42□□□□□ -2.48
RNU6-238P-201ENST00000363313 PNOCQ13519 176 aa-0.42□□□□□ -2.48
RNU6-238P-201ENST00000363313 MRPL2Q5T653 305 aaKnown RBP-0.42□□□□□ -2.48
RNU6-238P-201ENST00000363313 RBM43Q6ZSC3 357 aaKnown RBP-0.42□□□□□ -2.48
RNU6-238P-201ENST00000363313 OR1J4Q8NGS1 313 aa-0.42□□□□□ -2.48
RNU6-238P-201ENST00000363313 ZNF420Q8TAQ5 688 aaPredicted RBP-0.42□□□□□ -2.48
RNU6-238P-201ENST00000363313 OTUB2Q96DC9 234 aa-0.42□□□□□ -2.48
RNU6-238P-201ENST00000363313 ZNF75AQ96N20 296 aa-0.42□□□□□ -2.48
RNU6-238P-201ENST00000363313 SERPINB12Q96P63 405 aa-0.42□□□□□ -2.48
RNU6-238P-201ENST00000363313 ELOVL3Q9HB03 270 aa-0.42□□□□□ -2.48
RNU6-238P-201ENST00000363313 RWDD2AQ9UIY3 292 aa-0.42□□□□□ -2.48
RNU6-238P-201ENST00000363313 DLG5Q8TDM6 1919 aa-0.42□□□□□ -2.48
RNU6-238P-201ENST00000363313 HCRTO43612 131 aa-0.43□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms