RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 CTAG2O75638 210 aa20.13■□□□□ 0.81
LDB1-201ENST00000361198 AQP8O94778 261 aa20.13■□□□□ 0.81
LDB1-201ENST00000361198 PSMA6P60900 246 aaKnown RBP20.13■□□□□ 0.81
LDB1-201ENST00000361198 RBMS2Q15434 407 aaKnown RBP20.13■□□□□ 0.81
LDB1-201ENST00000361198 SLC36A1Q7Z2H8 476 aa20.13■□□□□ 0.81
LDB1-201ENST00000361198 UEVLDQ8IX04 471 aa20.13■□□□□ 0.81
LDB1-201ENST00000361198 KLHL13Q9P2N7 655 aa20.13■□□□□ 0.81
LDB1-201ENST00000361198 DHDHQ9UQ10 334 aa20.13■□□□□ 0.81
LDB1-201ENST00000361198 R4GMQ9 66 aa20.13■□□□□ 0.81
LDB1-201ENST00000361198 TUBAL3A6NHL2 446 aa20.13■□□□□ 0.81
LDB1-201ENST00000361198 TTLL8A6PVC2 850 aa20.13■□□□□ 0.81
LDB1-201ENST00000361198 PYCARD-AS1I3L0S3 204 aa20.13■□□□□ 0.81
LDB1-201ENST00000361198 RRASP10301 218 aa20.13■□□□□ 0.81
LDB1-201ENST00000361198 OPCMLQ14982 345 aa20.13■□□□□ 0.81
LDB1-201ENST00000361198 TMEM176BQ3YBM2 270 aaPredicted RBP20.13■□□□□ 0.81
LDB1-201ENST00000361198 LRFN4Q6PJG9 635 aa20.13■□□□□ 0.81
LDB1-201ENST00000361198 OPN5Q6U736 354 aa20.13■□□□□ 0.81
LDB1-201ENST00000361198 M1APQ8TC57 530 aa20.13■□□□□ 0.81
LDB1-201ENST00000361198 CNTRLQ7Z7A1 2325 aa20.12■□□□□ 0.81
LDB1-201ENST00000361198 FREM2Q5SZK8 3169 aa20.12■□□□□ 0.81
LDB1-201ENST00000361198 HRGP04196 525 aa20.12■□□□□ 0.81
LDB1-201ENST00000361198 PCGF3Q3KNV8 242 aa20.12■□□□□ 0.81
LDB1-201ENST00000361198 OR51D1Q8NGF3 324 aa20.12■□□□□ 0.81
LDB1-201ENST00000361198 C11orf40Q8WZ69 217 aa20.12■□□□□ 0.81
LDB1-201ENST00000361198 G6PC2Q9NQR9 355 aa20.12■□□□□ 0.81
LDB1-201ENST00000361198 GPR179Q6PRD1 2367 aa20.12■□□□□ 0.81
LDB1-201ENST00000361198 ZSCAN5BA6NJL1 495 aa20.11■□□□□ 0.81
LDB1-201ENST00000361198 RAMP1O60894 148 aa20.11■□□□□ 0.81
LDB1-201ENST00000361198 ITGA5P08648 1049 aa20.11■□□□□ 0.81
LDB1-201ENST00000361198 CCL3P10147 92 aa20.11■□□□□ 0.81
LDB1-201ENST00000361198 CXCL2P19875 107 aa20.11■□□□□ 0.81
LDB1-201ENST00000361198 ADH6P28332 368 aa20.11■□□□□ 0.81
LDB1-201ENST00000361198 IDO2Q6ZQW0 420 aa20.11■□□□□ 0.81
LDB1-201ENST00000361198 COMMD7Q86VX2 200 aa20.11■□□□□ 0.81
LDB1-201ENST00000361198 ADPRHL1Q8NDY3 354 aa20.11■□□□□ 0.81
LDB1-201ENST00000361198 OR4C16Q8NGL9 310 aa20.11■□□□□ 0.81
LDB1-201ENST00000361198 ZNF160Q9HCG1 818 aa20.11■□□□□ 0.81
LDB1-201ENST00000361198 CIB4A0PJX0 185 aa20.11■□□□□ 0.81
LDB1-201ENST00000361198 TRAF3IP2O43734 574 aaPredicted RBP20.11■□□□□ 0.81
LDB1-201ENST00000361198 GP1BAP07359 652 aa20.11■□□□□ 0.81
LDB1-201ENST00000361198 CSF1P09603 554 aa20.11■□□□□ 0.81
LDB1-201ENST00000361198 KLK2P20151 261 aa20.11■□□□□ 0.81
LDB1-201ENST00000361198 EIF1P41567 113 aaKnown RBP20.11■□□□□ 0.81
LDB1-201ENST00000361198 RAB14P61106 215 aa20.11■□□□□ 0.81
LDB1-201ENST00000361198 TMEM225Q6GV28 225 aa20.11■□□□□ 0.81
LDB1-201ENST00000361198 FAM166AQ6J272 317 aa20.11■□□□□ 0.81
LDB1-201ENST00000361198 NKX3-1Q99801 234 aaPredicted RBP20.11■□□□□ 0.81
LDB1-201ENST00000361198 SLC17A5Q9NRA2 495 aa20.11■□□□□ 0.81
LDB1-201ENST00000361198 CENPMQ9NSP4 180 aa20.11■□□□□ 0.81
LDB1-201ENST00000361198 FBXO4Q9UKT5 387 aa20.11■□□□□ 0.81
LDB1-201ENST00000361198 EIF1AYO14602 144 aaKnown RBP20.1■□□□□ 0.81
LDB1-201ENST00000361198 VSIG10L2P0DP72 767 aa20.1■□□□□ 0.81
LDB1-201ENST00000361198 ACP1P24666 158 aa20.1■□□□□ 0.81
LDB1-201ENST00000361198 EFNB2P52799 333 aa20.1■□□□□ 0.81
LDB1-201ENST00000361198 BIVMQ86UB2 503 aa20.1■□□□□ 0.81
LDB1-201ENST00000361198 SLC25A43Q8WUT9 341 aaPredicted RBP20.1■□□□□ 0.81
LDB1-201ENST00000361198 PHF3Q92576 2039 aaKnown RBP20.1■□□□□ 0.81
LDB1-201ENST00000361198 PROK2Q9HC23 129 aa20.1■□□□□ 0.81
LDB1-201ENST00000361198 BDP1A6H8Y1 2624 aa20.1■□□□□ 0.81
LDB1-201ENST00000361198 NSG1A0A0A6YYJ2 146 aa20.1■□□□□ 0.81
LDB1-201ENST00000361198 TMEM269A0A1B0GVZ9 245 aa20.1■□□□□ 0.81
LDB1-201ENST00000361198 OR6C65A6NJZ3 312 aa20.1■□□□□ 0.81
LDB1-201ENST00000361198 I3L521 148 aa20.1■□□□□ 0.81
LDB1-201ENST00000361198 SLC17A2O00624 439 aa20.1■□□□□ 0.81
LDB1-201ENST00000361198 PGA4P0DJD7 388 aa20.1■□□□□ 0.81
LDB1-201ENST00000361198 PGA3P0DJD8 388 aa20.1■□□□□ 0.81
LDB1-201ENST00000361198 NFYAP23511 347 aaPredicted RBP20.1■□□□□ 0.81
LDB1-201ENST00000361198 FOLR3P41439 243 aa20.1■□□□□ 0.81
LDB1-201ENST00000361198 POU3F4P49335 361 aa20.1■□□□□ 0.81
LDB1-201ENST00000361198 SSR4P51571 173 aa20.1■□□□□ 0.81
LDB1-201ENST00000361198 NHLRC3Q5JS37 347 aa20.1■□□□□ 0.81
LDB1-201ENST00000361198 THEM4Q5T1C6 240 aa20.1■□□□□ 0.81
LDB1-201ENST00000361198 HDDC2Q7Z4H3 204 aa20.1■□□□□ 0.81
LDB1-201ENST00000361198 DTWD2Q8NBA8 298 aa20.1■□□□□ 0.81
LDB1-201ENST00000361198 PLPP7Q8NBV4 271 aa20.1■□□□□ 0.81
LDB1-201ENST00000361198 OR6N1Q8NGY5 312 aa20.1■□□□□ 0.81
LDB1-201ENST00000361198 RNF133Q8WVZ7 376 aa20.1■□□□□ 0.81
LDB1-201ENST00000361198 ZBTB8AQ96BR9 441 aa20.1■□□□□ 0.81
LDB1-201ENST00000361198 GNRHR2Q96P88 292 aa20.1■□□□□ 0.81
LDB1-201ENST00000361198 NARFLQ9H6Q4 476 aa20.1■□□□□ 0.81
LDB1-201ENST00000361198 OR52A1Q9UKL2 312 aa20.1■□□□□ 0.81
LDB1-201ENST00000361198 NUP50Q9UKX7 468 aa20.1■□□□□ 0.81
LDB1-201ENST00000361198 A0A1W2PPL8 197 aa20.09■□□□□ 0.81
LDB1-201ENST00000361198 MCRIP1C9JLW8 97 aa20.09■□□□□ 0.81
LDB1-201ENST00000361198 EIF1AXP47813 144 aaKnown RBP20.09■□□□□ 0.81
LDB1-201ENST00000361198 CLRN1P58418 232 aa20.09■□□□□ 0.81
LDB1-201ENST00000361198 TMEM81Q6P7N7 255 aa20.09■□□□□ 0.81
LDB1-201ENST00000361198 DEGS2Q6QHC5 323 aa20.09■□□□□ 0.81
LDB1-201ENST00000361198 OR10H5Q8NGA6 315 aa20.09■□□□□ 0.81
LDB1-201ENST00000361198 RHBDD1Q8TEB9 315 aa20.09■□□□□ 0.81
LDB1-201ENST00000361198 ELMOD3Q96FG2 381 aa20.09■□□□□ 0.81
LDB1-201ENST00000361198 SLC25A44Q96H78 314 aaPredicted RBP20.09■□□□□ 0.81
LDB1-201ENST00000361198 SFXN2Q96NB2 322 aa20.09■□□□□ 0.81
LDB1-201ENST00000361198 CYB5R1Q9UHQ9 305 aa20.09■□□□□ 0.81
LDB1-201ENST00000361198 HDGFL3Q9Y3E1 203 aa20.09■□□□□ 0.81
LDB1-201ENST00000361198 COL27A1Q8IZC6 1860 aaPredicted RBP20.09■□□□□ 0.81
LDB1-201ENST00000361198 LOC101059948A0A1B0GTJ6 334 aa20.09■□□□□ 0.81
LDB1-201ENST00000361198 G3V3Y1 287 aa20.09■□□□□ 0.81
LDB1-201ENST00000361198 CD2P06729 351 aa20.09■□□□□ 0.81
LDB1-201ENST00000361198 H2BFMP0C1H6 154 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms