RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 MOB1BQ7L9L4 216 aa14.64□□□□□ -0.07
COL18A1-203ENST00000359759 OR10P1Q8NGE3 313 aa14.64□□□□□ -0.07
COL18A1-203ENST00000359759 IFT172Q9UG01 1749 aa14.64□□□□□ -0.07
COL18A1-203ENST00000359759 TAAR5O14804 337 aa14.64□□□□□ -0.07
COL18A1-203ENST00000359759 GJA4P35212 333 aa14.64□□□□□ -0.07
COL18A1-203ENST00000359759 RBP2P50120 134 aa14.64□□□□□ -0.07
COL18A1-203ENST00000359759 ZNF816Q0VGE8 651 aaPredicted RBP14.64□□□□□ -0.07
COL18A1-203ENST00000359759 ANKRD34AQ69YU3 496 aa14.64□□□□□ -0.07
COL18A1-203ENST00000359759 OR2M7Q8NG81 312 aa14.64□□□□□ -0.07
COL18A1-203ENST00000359759 TRMT61AQ96FX7 289 aaKnown RBP14.64□□□□□ -0.07
COL18A1-203ENST00000359759 SLC22A12Q96S37 553 aa14.64□□□□□ -0.07
COL18A1-203ENST00000359759 GSX2Q9BZM3 304 aa14.64□□□□□ -0.07
COL18A1-203ENST00000359759 AUNIPQ9H7T9 357 aa14.64□□□□□ -0.07
COL18A1-203ENST00000359759 PPT2Q9UMR5 302 aa14.64□□□□□ -0.07
COL18A1-203ENST00000359759 C5orf49A4QMS7 147 aa14.63□□□□□ -0.07
COL18A1-203ENST00000359759 M0R082 166 aa14.63□□□□□ -0.07
COL18A1-203ENST00000359759 TPOP07202 933 aa14.63□□□□□ -0.07
COL18A1-203ENST00000359759 ADH4P08319 380 aa14.63□□□□□ -0.07
COL18A1-203ENST00000359759 ZNF385BQ569K4 471 aa14.63□□□□□ -0.07
COL18A1-203ENST00000359759 NCR3LG1Q68D85 454 aa14.63□□□□□ -0.07
COL18A1-203ENST00000359759 TMEM81Q6P7N7 255 aa14.63□□□□□ -0.07
COL18A1-203ENST00000359759 USP51Q70EK9 711 aa14.63□□□□□ -0.07
COL18A1-203ENST00000359759 CMTM4Q8IZR5 234 aa14.63□□□□□ -0.07
COL18A1-203ENST00000359759 ARHGDIGQ99819 225 aa14.63□□□□□ -0.07
COL18A1-203ENST00000359759 ZNF346Q9UL40 294 aaKnown RBP14.63□□□□□ -0.07
COL18A1-203ENST00000359759 GPX5O75715 221 aa14.63□□□□□ -0.07
COL18A1-203ENST00000359759 ENDOGQ14249 297 aaKnown RBP14.63□□□□□ -0.07
COL18A1-203ENST00000359759 TRMT12Q53H54 448 aaKnown RBP14.63□□□□□ -0.07
COL18A1-203ENST00000359759 DRAM2Q6UX65 266 aa14.63□□□□□ -0.07
COL18A1-203ENST00000359759 NUDCD2Q8WVJ2 157 aa14.63□□□□□ -0.07
COL18A1-203ENST00000359759 LHX4Q969G2 390 aa14.63□□□□□ -0.07
COL18A1-203ENST00000359759 CRLF2Q9HC73 371 aa14.63□□□□□ -0.07
COL18A1-203ENST00000359759 PLSCR3Q9NRY6 295 aa14.63□□□□□ -0.07
COL18A1-203ENST00000359759 RCL1Q9Y2P8 373 aaKnown RBP14.63□□□□□ -0.07
COL18A1-203ENST00000359759 ARFGEF2Q9Y6D5 1785 aa14.63□□□□□ -0.07
COL18A1-203ENST00000359759 SH2D1BO14796 132 aa14.63□□□□□ -0.07
COL18A1-203ENST00000359759 SIRT6Q8N6T7 355 aa14.63□□□□□ -0.07
COL18A1-203ENST00000359759 NAT6Q93015 286 aa14.63□□□□□ -0.07
COL18A1-203ENST00000359759 SLAMF6Q96DU3 332 aa14.63□□□□□ -0.07
COL18A1-203ENST00000359759 ZDHHC11Q9H8X9 412 aa14.63□□□□□ -0.07
COL18A1-203ENST00000359759 TIMM9Q9Y5J7 89 aa14.63□□□□□ -0.07
COL18A1-203ENST00000359759 ZNF142P52746 1687 aaPredicted RBP14.63□□□□□ -0.07
COL18A1-203ENST00000359759 OR5K3A6NET4 321 aa14.63□□□□□ -0.07
COL18A1-203ENST00000359759 PRKNO60260 465 aaPredicted RBP14.63□□□□□ -0.07
COL18A1-203ENST00000359759 SLC35E2P0CK97 266 aa14.63□□□□□ -0.07
COL18A1-203ENST00000359759 GABRB1P18505 474 aa14.63□□□□□ -0.07
COL18A1-203ENST00000359759 PLXDC2Q6UX71 529 aa14.63□□□□□ -0.07
COL18A1-203ENST00000359759 RABEPKQ7Z6M1 372 aa14.63□□□□□ -0.07
COL18A1-203ENST00000359759 PELI3Q8N2H9 469 aa14.63□□□□□ -0.07
COL18A1-203ENST00000359759 THOC3Q96J01 351 aaKnown RBP14.63□□□□□ -0.07
COL18A1-203ENST00000359759 SBK2P0C263 348 aa14.63□□□□□ -0.07
COL18A1-203ENST00000359759 FAM157BP0CG42 384 aa14.63□□□□□ -0.07
COL18A1-203ENST00000359759 SOX18P35713 384 aa14.63□□□□□ -0.07
COL18A1-203ENST00000359759 SLC38A9Q8NBW4 561 aa14.63□□□□□ -0.07
COL18A1-203ENST00000359759 OR10AD1Q8NGE0 317 aa14.63□□□□□ -0.07
COL18A1-203ENST00000359759 OLIG1Q8TAK6 271 aa14.63□□□□□ -0.07
COL18A1-203ENST00000359759 FAM174AQ8TBP5 190 aa14.63□□□□□ -0.07
COL18A1-203ENST00000359759 M1APQ8TC57 530 aa14.63□□□□□ -0.07
COL18A1-203ENST00000359759 UBTD2Q8WUN7 234 aa14.63□□□□□ -0.07
COL18A1-203ENST00000359759 TMEM38AQ9H6F2 299 aa14.63□□□□□ -0.07
COL18A1-203ENST00000359759 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.63□□□□□ -0.07
COL18A1-203ENST00000359759 SPNP16150 400 aa14.63□□□□□ -0.07
COL18A1-203ENST00000359759 TAS2R45P59539 299 aa14.63□□□□□ -0.07
COL18A1-203ENST00000359759 CSNK1G2P78368 415 aa14.63□□□□□ -0.07
COL18A1-203ENST00000359759 AANATQ16613 207 aa14.63□□□□□ -0.07
COL18A1-203ENST00000359759 RTL8BQ17RB0 113 aa14.63□□□□□ -0.07
COL18A1-203ENST00000359759 TMEM18Q96B42 140 aa14.63□□□□□ -0.07
COL18A1-203ENST00000359759 ORAI1Q96D31 301 aa14.63□□□□□ -0.07
COL18A1-203ENST00000359759 LAMP3Q9UQV4 416 aa14.63□□□□□ -0.07
COL18A1-203ENST00000359759 STRAPQ9Y3F4 350 aaKnown RBP14.63□□□□□ -0.07
COL18A1-203ENST00000359759 M0R1B8 84 aa14.62□□□□□ -0.07
COL18A1-203ENST00000359759 PSMB6P28072 239 aa14.62□□□□□ -0.07
COL18A1-203ENST00000359759 RPS27P42677 84 aaKnown RBP14.62□□□□□ -0.07
COL18A1-203ENST00000359759 ACSM5Q6NUN0 579 aa14.62□□□□□ -0.07
COL18A1-203ENST00000359759 KLHDC9Q8NEP7 349 aa14.62□□□□□ -0.07
COL18A1-203ENST00000359759 MARCH1Q8TCQ1 289 aa14.62□□□□□ -0.07
COL18A1-203ENST00000359759 NDFIP1Q9BT67 221 aa14.62□□□□□ -0.07
COL18A1-203ENST00000359759 LOXHD1Q8IVV2 1947 aa14.62□□□□□ -0.07
COL18A1-203ENST00000359759 TMX2-CTNND1H3BSU7 103 aa14.62□□□□□ -0.07
COL18A1-203ENST00000359759 TIGITQ495A1 244 aa14.62□□□□□ -0.07
COL18A1-203ENST00000359759 CSF3RQ99062 836 aa14.62□□□□□ -0.07
COL18A1-203ENST00000359759 STACQ99469 402 aa14.62□□□□□ -0.07
COL18A1-203ENST00000359759 ATP23Q9Y6H3 246 aa14.62□□□□□ -0.07
COL18A1-203ENST00000359759 MEIKINA0A087WXM9 373 aa14.62□□□□□ -0.07
COL18A1-203ENST00000359759 TRAV20A0A0B4J274 112 aa14.62□□□□□ -0.07
COL18A1-203ENST00000359759 TMEM202A6NGA9 273 aa14.62□□□□□ -0.07
COL18A1-203ENST00000359759 AMTP48728 403 aa14.62□□□□□ -0.07
COL18A1-203ENST00000359759 ASCL1P50553 236 aa14.62□□□□□ -0.07
COL18A1-203ENST00000359759 DUSP2Q05923 314 aa14.62□□□□□ -0.07
COL18A1-203ENST00000359759 FUNDC1Q8IVP5 155 aa14.62□□□□□ -0.07
COL18A1-203ENST00000359759 TCTE3Q8IZS6 198 aa14.62□□□□□ -0.07
COL18A1-203ENST00000359759 IKZF5Q9H5V7 419 aa14.62□□□□□ -0.07
COL18A1-203ENST00000359759 EPHX3Q9H6B9 360 aa14.62□□□□□ -0.07
COL18A1-203ENST00000359759 UBE2L5PA0A1B0GUS4 154 aa14.62□□□□□ -0.07
COL18A1-203ENST00000359759 UNCXA6NJT0 531 aa14.62□□□□□ -0.07
COL18A1-203ENST00000359759 PLPP1O14494 284 aa14.62□□□□□ -0.07
COL18A1-203ENST00000359759 SULT1A3P0DMM9 295 aa14.62□□□□□ -0.07
COL18A1-203ENST00000359759 SULT1A4P0DMN0 295 aa14.62□□□□□ -0.07
COL18A1-203ENST00000359759 FABP4P15090 132 aa14.62□□□□□ -0.07
COL18A1-203ENST00000359759 GLB1P16278 677 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms