RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 TMEM82A0PJX8 343 aa11.28□□□□□ -0.6
GGPS1-202ENST00000358966 MPTX1A8MV57 137 aa11.28□□□□□ -0.6
GGPS1-202ENST00000358966 TERTO14746 1132 aaKnown RBP11.28□□□□□ -0.6
GGPS1-202ENST00000358966 DHFRP00374 187 aa11.28□□□□□ -0.6
GGPS1-202ENST00000358966 LPLP06858 475 aa11.28□□□□□ -0.6
GGPS1-202ENST00000358966 CYC1P08574 325 aa11.28□□□□□ -0.6
GGPS1-202ENST00000358966 H2AFB1P0C5Y9 115 aa11.28□□□□□ -0.6
GGPS1-202ENST00000358966 H2AFB2P0C5Z0 115 aa11.28□□□□□ -0.6
GGPS1-202ENST00000358966 BIDP55957 195 aa11.28□□□□□ -0.6
GGPS1-202ENST00000358966 HSF1Q00613 529 aa11.28□□□□□ -0.6
GGPS1-202ENST00000358966 DEFA5Q01523 94 aa11.28□□□□□ -0.6
GGPS1-202ENST00000358966 CAMK2DQ13557 499 aa11.28□□□□□ -0.6
GGPS1-202ENST00000358966 CSRP2Q16527 193 aa11.28□□□□□ -0.6
GGPS1-202ENST00000358966 C9orf152Q5JTZ5 239 aa11.28□□□□□ -0.6
GGPS1-202ENST00000358966 RGS7BPQ6MZT1 257 aaPredicted RBP11.28□□□□□ -0.6
GGPS1-202ENST00000358966 LRRN1Q6UXK5 716 aa11.28□□□□□ -0.6
GGPS1-202ENST00000358966 LINC00696Q6ZRV3 163 aa11.28□□□□□ -0.6
GGPS1-202ENST00000358966 CEACAM19Q7Z692 300 aa11.28□□□□□ -0.6
GGPS1-202ENST00000358966 VASH2Q86V25 355 aa11.28□□□□□ -0.6
GGPS1-202ENST00000358966 LINC00346Q8IVM7 164 aa11.28□□□□□ -0.6
GGPS1-202ENST00000358966 OR1J4Q8NGS1 313 aa11.28□□□□□ -0.6
GGPS1-202ENST00000358966 CA5BP1Q8WTZ4 195 aa11.28□□□□□ -0.6
GGPS1-202ENST00000358966 PPP1R14AQ96A00 147 aa11.28□□□□□ -0.6
GGPS1-202ENST00000358966 ADAD1Q96M93 576 aaKnown RBP11.28□□□□□ -0.6
GGPS1-202ENST00000358966 PTGES2Q9H7Z7 377 aa11.28□□□□□ -0.6
GGPS1-202ENST00000358966 ABCB9Q9NP78 766 aa11.28□□□□□ -0.6
GGPS1-202ENST00000358966 CHST11Q9NPF2 352 aa11.28□□□□□ -0.6
GGPS1-202ENST00000358966 ISYNA1Q9NPH2 558 aa11.28□□□□□ -0.6
GGPS1-202ENST00000358966 SERINC1Q9NRX5 453 aa11.28□□□□□ -0.6
GGPS1-202ENST00000358966 MRM2Q9UI43 246 aaKnown RBP11.28□□□□□ -0.6
GGPS1-202ENST00000358966 LAMP5Q9UJQ1 280 aa11.28□□□□□ -0.6
GGPS1-202ENST00000358966 DOCK7Q96N67 2140 aa11.28□□□□□ -0.6
GGPS1-202ENST00000358966 IGLV3-32A0A0A0MS00 114 aa11.28□□□□□ -0.6
GGPS1-202ENST00000358966 TRBV2A0A0J9YWF9 115 aa11.28□□□□□ -0.6
GGPS1-202ENST00000358966 A0A1B0GVC2 190 aa11.28□□□□□ -0.6
GGPS1-202ENST00000358966 OR2M5A3KFT3 312 aa11.28□□□□□ -0.6
GGPS1-202ENST00000358966 A6NIN4 97 aa11.28□□□□□ -0.6
GGPS1-202ENST00000358966 NPIPA5E9PKD4 350 aa11.28□□□□□ -0.6
GGPS1-202ENST00000358966 ORC5O43913 435 aa11.28□□□□□ -0.6
GGPS1-202ENST00000358966 LY86O95711 162 aa11.28□□□□□ -0.6
GGPS1-202ENST00000358966 ADRB1P08588 477 aa11.28□□□□□ -0.6
GGPS1-202ENST00000358966 SPARCP09486 303 aa11.28□□□□□ -0.6
GGPS1-202ENST00000358966 LIFP15018 202 aa11.28□□□□□ -0.6
GGPS1-202ENST00000358966 SLC25A1P53007 311 aa11.28□□□□□ -0.6
GGPS1-202ENST00000358966 CLDN20P56880 219 aa11.28□□□□□ -0.6
GGPS1-202ENST00000358966 PYDC2Q56P42 97 aa11.28□□□□□ -0.6
GGPS1-202ENST00000358966 DMKNQ6E0U4 476 aaPredicted RBP11.28□□□□□ -0.6
GGPS1-202ENST00000358966 GDPGP1Q6ZNW5 385 aa11.28□□□□□ -0.6
GGPS1-202ENST00000358966 MFSD8Q8NHS3 518 aa11.28□□□□□ -0.6
GGPS1-202ENST00000358966 LRRC46Q96FV0 321 aa11.28□□□□□ -0.6
GGPS1-202ENST00000358966 NARS2Q96I59 477 aaKnown RBP11.28□□□□□ -0.6
GGPS1-202ENST00000358966 UCN2Q96RP3 112 aa11.28□□□□□ -0.6
GGPS1-202ENST00000358966 ZPBPQ9BS86 351 aa11.28□□□□□ -0.6
GGPS1-202ENST00000358966 RNF32Q9H0A6 362 aa11.28□□□□□ -0.6
GGPS1-202ENST00000358966 SH2D2AQ9NP31 389 aa11.28□□□□□ -0.6
GGPS1-202ENST00000358966 RBFOX1Q9NWB1 397 aaKnown RBP11.28□□□□□ -0.6
GGPS1-202ENST00000358966 NPIPA1Q9UND3 350 aa11.28□□□□□ -0.6
GGPS1-202ENST00000358966 GSTK1Q9Y2Q3 226 aa11.28□□□□□ -0.6
GGPS1-202ENST00000358966 PIEZO2Q9H5I5 2752 aa11.27□□□□□ -0.6
GGPS1-202ENST00000358966 ANKRD11Q6UB99 2663 aaPredicted RBP11.27□□□□□ -0.6
GGPS1-202ENST00000358966 ACOD1A6NK06 481 aa11.27□□□□□ -0.61
GGPS1-202ENST00000358966 POM121CA8CG34 1229 aa11.27□□□□□ -0.61
GGPS1-202ENST00000358966 ZNF593O00488 134 aaPredicted RBP11.27□□□□□ -0.61
GGPS1-202ENST00000358966 SEC14L5O43304 696 aa11.27□□□□□ -0.61
GGPS1-202ENST00000358966 PLPP2O43688 288 aa11.27□□□□□ -0.61
GGPS1-202ENST00000358966 ZIC3O60481 467 aa11.27□□□□□ -0.61
GGPS1-202ENST00000358966 RGS9O75916 674 aaPredicted RBP11.27□□□□□ -0.61
GGPS1-202ENST00000358966 ITGA3P26006 1051 aa11.27□□□□□ -0.61
GGPS1-202ENST00000358966 SIRPAP78324 504 aa11.27□□□□□ -0.61
GGPS1-202ENST00000358966 GABREP78334 506 aa11.27□□□□□ -0.61
GGPS1-202ENST00000358966 CDK5R1Q15078 307 aa11.27□□□□□ -0.61
GGPS1-202ENST00000358966 SLC35D3Q5M8T2 416 aa11.27□□□□□ -0.61
GGPS1-202ENST00000358966 LIPNQ5VXI9 398 aa11.27□□□□□ -0.61
GGPS1-202ENST00000358966 NLRC3Q7RTR2 1065 aa11.27□□□□□ -0.61
GGPS1-202ENST00000358966 PIP4P1Q86T03 277 aa11.27□□□□□ -0.61
GGPS1-202ENST00000358966 C12orf45Q8N5I9 185 aaPredicted RBP11.27□□□□□ -0.61
GGPS1-202ENST00000358966 BVESQ8NE79 360 aa11.27□□□□□ -0.61
GGPS1-202ENST00000358966 ABHD4Q8TB40 342 aa11.27□□□□□ -0.61
GGPS1-202ENST00000358966 ASB10Q8WXI3 467 aa11.27□□□□□ -0.61
GGPS1-202ENST00000358966 SIGLEC12Q96PQ1 595 aa11.27□□□□□ -0.61
GGPS1-202ENST00000358966 ANGPTL4Q9BY76 406 aa11.27□□□□□ -0.61
GGPS1-202ENST00000358966 MIXL1Q9H2W2 232 aa11.27□□□□□ -0.61
GGPS1-202ENST00000358966 B3GAT2Q9NPZ5 323 aa11.27□□□□□ -0.61
GGPS1-202ENST00000358966 INPP5EQ9NRR6 644 aa11.27□□□□□ -0.61
GGPS1-202ENST00000358966 DKKL1Q9UK85 242 aa11.27□□□□□ -0.61
GGPS1-202ENST00000358966 NCOA6Q14686 2063 aaPredicted RBP11.27□□□□□ -0.61
GGPS1-202ENST00000358966 IGLV1-36A0A0B4J1U3 117 aa11.27□□□□□ -0.61
GGPS1-202ENST00000358966 FABP12A6NFH5 140 aa11.27□□□□□ -0.61
GGPS1-202ENST00000358966 SLC43A1O75387 559 aa11.27□□□□□ -0.61
GGPS1-202ENST00000358966 ZFPL1O95159 310 aa11.27□□□□□ -0.61
GGPS1-202ENST00000358966 HPP00738 406 aa11.27□□□□□ -0.61
GGPS1-202ENST00000358966 MSX1P28360 303 aa11.27□□□□□ -0.61
GGPS1-202ENST00000358966 FGF9P31371 208 aaPredicted RBP11.27□□□□□ -0.61
GGPS1-202ENST00000358966 EIF1AXP47813 144 aaKnown RBP11.27□□□□□ -0.61
GGPS1-202ENST00000358966 MFAP5Q13361 173 aa11.27□□□□□ -0.61
GGPS1-202ENST00000358966 ACSM3Q53FZ2 586 aa11.27□□□□□ -0.61
GGPS1-202ENST00000358966 FAM76BQ5HYJ3 339 aa11.27□□□□□ -0.61
GGPS1-202ENST00000358966 DUSP18Q8NEJ0 188 aa11.27□□□□□ -0.61
GGPS1-202ENST00000358966 OR10AC1Q8NH08 325 aa11.27□□□□□ -0.61
GGPS1-202ENST00000358966 INTS14Q96SY0 518 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms