RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 STMND1H3BQB6 276 aa10.68□□□□□ -0.7
COL9A1-202ENST00000357250 NUPL2O15504 423 aaKnown RBP10.68□□□□□ -0.7
COL9A1-202ENST00000357250 TGOLN2O43493 480 aa10.68□□□□□ -0.7
COL9A1-202ENST00000357250 ETHE1O95571 254 aa10.68□□□□□ -0.7
COL9A1-202ENST00000357250 HPNP05981 417 aa10.68□□□□□ -0.7
COL9A1-202ENST00000357250 QDPRP09417 244 aa10.68□□□□□ -0.7
COL9A1-202ENST00000357250 FOLR1P15328 257 aa10.68□□□□□ -0.7
COL9A1-202ENST00000357250 FGF9P31371 208 aaPredicted RBP10.68□□□□□ -0.7
COL9A1-202ENST00000357250 BAK1Q16611 211 aa10.68□□□□□ -0.7
COL9A1-202ENST00000357250 OR2AE1Q8NHA4 323 aa10.68□□□□□ -0.7
COL9A1-202ENST00000357250 CNRIP1Q96F85 164 aaPredicted RBP10.68□□□□□ -0.7
COL9A1-202ENST00000357250 BOD1Q96IK1 185 aa10.68□□□□□ -0.7
COL9A1-202ENST00000357250 ZPBPQ9BS86 351 aa10.68□□□□□ -0.7
COL9A1-202ENST00000357250 ZNF416Q9BWM5 594 aa10.68□□□□□ -0.7
COL9A1-202ENST00000357250 OPA3Q9H6K4 179 aa10.68□□□□□ -0.7
COL9A1-202ENST00000357250 WBP1LQ9NX94 342 aa10.68□□□□□ -0.7
COL9A1-202ENST00000357250 FBXL4Q9UKA2 621 aa10.68□□□□□ -0.7
COL9A1-202ENST00000357250 RP1P56715 2156 aa10.68□□□□□ -0.7
COL9A1-202ENST00000357250 M0R135 149 aa10.68□□□□□ -0.7
COL9A1-202ENST00000357250 ANXA7P20073 488 aaKnown RBP10.68□□□□□ -0.7
COL9A1-202ENST00000357250 OMGP23515 440 aa10.68□□□□□ -0.7
COL9A1-202ENST00000357250 MCCD1P59942 119 aaPredicted RBP10.68□□□□□ -0.7
COL9A1-202ENST00000357250 FABP5Q01469 135 aa10.68□□□□□ -0.7
COL9A1-202ENST00000357250 FZD2Q14332 565 aa10.68□□□□□ -0.7
COL9A1-202ENST00000357250 SMIM15Q7Z3B0 74 aa10.68□□□□□ -0.7
COL9A1-202ENST00000357250 FJX1Q86VR8 437 aa10.68□□□□□ -0.7
COL9A1-202ENST00000357250 CPEB3Q8NE35 698 aaKnown RBP10.68□□□□□ -0.7
COL9A1-202ENST00000357250 ZNF775Q96BV0 537 aaPredicted RBP10.68□□□□□ -0.7
COL9A1-202ENST00000357250 ZNF799Q96GE5 643 aa10.68□□□□□ -0.7
COL9A1-202ENST00000357250 RNF170Q96K19 258 aa10.68□□□□□ -0.7
COL9A1-202ENST00000357250 DDOQ99489 341 aa10.68□□□□□ -0.7
COL9A1-202ENST00000357250 EGLN1Q9GZT9 426 aa10.68□□□□□ -0.7
COL9A1-202ENST00000357250 TAS2R5Q9NYW4 299 aa10.68□□□□□ -0.7
COL9A1-202ENST00000357250 IL20Q9NYY1 176 aa10.68□□□□□ -0.7
COL9A1-202ENST00000357250 CTSLP07711 333 aa10.68□□□□□ -0.7
COL9A1-202ENST00000357250 HLA-DOBP13765 273 aa10.68□□□□□ -0.7
COL9A1-202ENST00000357250 ZNF85Q03923 595 aa10.68□□□□□ -0.7
COL9A1-202ENST00000357250 SCGB2A2Q13296 93 aa10.68□□□□□ -0.7
COL9A1-202ENST00000357250 PCK2Q16822 640 aa10.68□□□□□ -0.7
COL9A1-202ENST00000357250 PRTGQ2VWP7 1150 aa10.68□□□□□ -0.7
COL9A1-202ENST00000357250 TMEM41BQ5BJD5 291 aa10.68□□□□□ -0.7
COL9A1-202ENST00000357250 OR52W1Q6IF63 320 aa10.68□□□□□ -0.7
COL9A1-202ENST00000357250 TMPRSS11FQ6ZWK6 438 aa10.68□□□□□ -0.7
COL9A1-202ENST00000357250 CATSPERDQ86XM0 798 aa10.68□□□□□ -0.7
COL9A1-202ENST00000357250 FAM185AQ8N0U4 392 aa10.68□□□□□ -0.7
COL9A1-202ENST00000357250 C11orf40Q8WZ69 217 aa10.68□□□□□ -0.7
COL9A1-202ENST00000357250 CORO2AQ92828 525 aa10.68□□□□□ -0.7
COL9A1-202ENST00000357250 FGF14Q92915 247 aa10.68□□□□□ -0.7
COL9A1-202ENST00000357250 RPP25Q9BUL9 199 aaKnown RBP10.68□□□□□ -0.7
COL9A1-202ENST00000357250 TAF9BQ9HBM6 251 aa10.68□□□□□ -0.7
COL9A1-202ENST00000357250 HEYLQ9NQ87 328 aaPredicted RBP10.68□□□□□ -0.7
COL9A1-202ENST00000357250 SLC17A5Q9NRA2 495 aa10.68□□□□□ -0.7
COL9A1-202ENST00000357250 EXO1Q9UQ84 846 aaKnown RBP10.68□□□□□ -0.7
COL9A1-202ENST00000357250 TBXA2RP21731 343 aa10.68□□□□□ -0.7
COL9A1-202ENST00000357250 SCAND1P57086 179 aa10.68□□□□□ -0.7
COL9A1-202ENST00000357250 SHBQ15464 509 aa10.68□□□□□ -0.7
COL9A1-202ENST00000357250 PNLIPRP3Q17RR3 467 aa10.68□□□□□ -0.7
COL9A1-202ENST00000357250 TMEM71Q6P5X7 295 aa10.68□□□□□ -0.7
COL9A1-202ENST00000357250 ZNF573Q86YE8 665 aa10.68□□□□□ -0.7
COL9A1-202ENST00000357250 CARFQ8N187 725 aa10.68□□□□□ -0.7
COL9A1-202ENST00000357250 DTWD2Q8NBA8 298 aa10.68□□□□□ -0.7
COL9A1-202ENST00000357250 SMIM4Q8WVI0 70 aa10.68□□□□□ -0.7
COL9A1-202ENST00000357250 ZNF764Q96H86 408 aaPredicted RBP10.68□□□□□ -0.7
COL9A1-202ENST00000357250 CTRCQ99895 268 aa10.68□□□□□ -0.7
COL9A1-202ENST00000357250 ARV1Q9H2C2 271 aa10.68□□□□□ -0.7
COL9A1-202ENST00000357250 OR51B4Q9Y5P0 310 aa10.68□□□□□ -0.7
COL9A1-202ENST00000357250 TUSC2O75896 110 aa10.67□□□□□ -0.7
COL9A1-202ENST00000357250 GABRB1P18505 474 aa10.67□□□□□ -0.7
COL9A1-202ENST00000357250 PSMB6P28072 239 aa10.67□□□□□ -0.7
COL9A1-202ENST00000357250 DGCR2P98153 550 aa10.67□□□□□ -0.7
COL9A1-202ENST00000357250 TAGLNQ01995 201 aaKnown RBP10.67□□□□□ -0.7
COL9A1-202ENST00000357250 PRSS45Q7RTY3 260 aa10.67□□□□□ -0.7
COL9A1-202ENST00000357250 TMEM179BQ7Z7N9 219 aa10.67□□□□□ -0.7
COL9A1-202ENST00000357250 CISD2Q8N5K1 135 aaKnown RBP10.67□□□□□ -0.7
COL9A1-202ENST00000357250 NTN4Q9HB63 628 aa10.67□□□□□ -0.7
COL9A1-202ENST00000357250 PPP1R14DQ9NXH3 145 aa10.67□□□□□ -0.7
COL9A1-202ENST00000357250 ASH2LQ9UBL3 628 aa10.67□□□□□ -0.7
COL9A1-202ENST00000357250 FITM1A5D6W6 292 aa10.67□□□□□ -0.7
COL9A1-202ENST00000357250 LGALS8O00214 317 aa10.67□□□□□ -0.7
COL9A1-202ENST00000357250 APEHP13798 732 aaKnown RBP10.67□□□□□ -0.7
COL9A1-202ENST00000357250 B4GALNT1Q00973 533 aa10.67□□□□□ -0.7
COL9A1-202ENST00000357250 STAC2Q6ZMT1 411 aa10.67□□□□□ -0.7
COL9A1-202ENST00000357250 SPEM1Q8N4L4 309 aa10.67□□□□□ -0.7
COL9A1-202ENST00000357250 NUDT9Q9BW91 350 aa10.67□□□□□ -0.7
COL9A1-202ENST00000357250 GFOD1Q9NXC2 390 aa10.67□□□□□ -0.7
COL9A1-202ENST00000357250 FOXJ3Q9UPW0 622 aa10.67□□□□□ -0.7
COL9A1-202ENST00000357250 ANKRD61A6NGH8 418 aa10.67□□□□□ -0.7
COL9A1-202ENST00000357250 HOXC4P09017 264 aaPredicted RBP10.67□□□□□ -0.7
COL9A1-202ENST00000357250 GZMKP49863 264 aa10.67□□□□□ -0.7
COL9A1-202ENST00000357250 MMP15P51511 669 aa10.67□□□□□ -0.7
COL9A1-202ENST00000357250 SLC25A1P53007 311 aa10.67□□□□□ -0.7
COL9A1-202ENST00000357250 SUB1P53999 127 aaKnown RBP eCLIP10.67□□□□□ -0.7
COL9A1-202ENST00000357250 RUNX2Q13950 521 aa10.67□□□□□ -0.7
COL9A1-202ENST00000357250 OR10K2Q6IF99 312 aa10.67□□□□□ -0.7
COL9A1-202ENST00000357250 LINC00696Q6ZRV3 163 aa10.67□□□□□ -0.7
COL9A1-202ENST00000357250 LSRQ86X29 649 aaPredicted RBP10.67□□□□□ -0.7
COL9A1-202ENST00000357250 UBALD2Q8IYN6 164 aa10.67□□□□□ -0.7
COL9A1-202ENST00000357250 SLC35G3Q8N808 338 aa10.67□□□□□ -0.7
COL9A1-202ENST00000357250 HSD17B11Q8NBQ5 300 aa10.67□□□□□ -0.7
COL9A1-202ENST00000357250 SIGLEC11Q96RL6 698 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms