RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 TRBV5-4A0A0C4DH59 114 aa13.52□□□□□ -0.25
CHD4-201ENST00000357008 OR10J4P0C629 311 aa13.52□□□□□ -0.25
CHD4-201ENST00000357008 CNTRLQ7Z7A1 2325 aa13.52□□□□□ -0.25
CHD4-201ENST00000357008 ZNF891A8MT65 544 aaPredicted RBP13.52□□□□□ -0.25
CHD4-201ENST00000357008 K7EQM0 130 aa13.52□□□□□ -0.25
CHD4-201ENST00000357008 IGLV3-27P01718 113 aa13.52□□□□□ -0.25
CHD4-201ENST00000357008 EDDM3BP56851 147 aa13.52□□□□□ -0.25
CHD4-201ENST00000357008 PCK2Q16822 640 aa13.52□□□□□ -0.25
CHD4-201ENST00000357008 THEM4Q5T1C6 240 aa13.52□□□□□ -0.25
CHD4-201ENST00000357008 ZNF425Q6IV72 752 aa13.52□□□□□ -0.25
CHD4-201ENST00000357008 VHLLQ6RSH7 139 aa13.52□□□□□ -0.25
CHD4-201ENST00000357008 BTNL8Q6UX41 500 aa13.52□□□□□ -0.25
CHD4-201ENST00000357008 SLC37A2Q8TED4 501 aa13.52□□□□□ -0.25
CHD4-201ENST00000357008 C19orf43Q9BQ61 176 aa13.52□□□□□ -0.25
CHD4-201ENST00000357008 NGBQ9NPG2 151 aa13.52□□□□□ -0.25
CHD4-201ENST00000357008 OBP2AQ9NY56 170 aa13.52□□□□□ -0.25
CHD4-201ENST00000357008 A0A087WV62 115 aa13.51□□□□□ -0.25
CHD4-201ENST00000357008 H3BNC9 293 aa13.51□□□□□ -0.25
CHD4-201ENST00000357008 SDCBPO00560 298 aaPredicted RBP13.51□□□□□ -0.25
CHD4-201ENST00000357008 DTYMKP23919 212 aa13.51□□□□□ -0.25
CHD4-201ENST00000357008 ZNF626Q68DY1 528 aa13.51□□□□□ -0.25
CHD4-201ENST00000357008 TMEM123Q8N131 208 aa13.51□□□□□ -0.25
CHD4-201ENST00000357008 EXD3Q8N9H8 876 aa13.51□□□□□ -0.25
CHD4-201ENST00000357008 CLRN3Q8NCR9 226 aa13.51□□□□□ -0.25
CHD4-201ENST00000357008 FBXW5Q969U6 566 aa13.51□□□□□ -0.25
CHD4-201ENST00000357008 WDR89Q96FK6 387 aaPredicted RBP13.51□□□□□ -0.25
CHD4-201ENST00000357008 ASH2LQ9UBL3 628 aa13.51□□□□□ -0.25
CHD4-201ENST00000357008 PTAFRP25105 342 aa13.51□□□□□ -0.25
CHD4-201ENST00000357008 HSF5Q4G112 596 aaPredicted RBP13.51□□□□□ -0.25
CHD4-201ENST00000357008 NKAIN2Q5VXU1 208 aa13.51□□□□□ -0.25
CHD4-201ENST00000357008 CALHM3Q86XJ0 350 aa13.51□□□□□ -0.25
CHD4-201ENST00000357008 OR13H1Q8NG92 308 aa13.51□□□□□ -0.25
CHD4-201ENST00000357008 OR51F2Q8NH61 342 aa13.51□□□□□ -0.25
CHD4-201ENST00000357008 PPP1R1CQ8WVI7 109 aa13.51□□□□□ -0.25
CHD4-201ENST00000357008 PLA2G12AQ9BZM1 189 aa13.51□□□□□ -0.25
CHD4-201ENST00000357008 R4GMQ9 66 aa13.51□□□□□ -0.25
CHD4-201ENST00000357008 HRH1P35367 487 aa13.51□□□□□ -0.25
CHD4-201ENST00000357008 FABP6P51161 128 aa13.51□□□□□ -0.25
CHD4-201ENST00000357008 SLC17A1Q14916 467 aa13.51□□□□□ -0.25
CHD4-201ENST00000357008 OR4C16Q8NGL9 310 aa13.51□□□□□ -0.25
CHD4-201ENST00000357008 EFSO43281 561 aa13.51□□□□□ -0.25
CHD4-201ENST00000357008 ZNF749O43361 778 aa13.51□□□□□ -0.25
CHD4-201ENST00000357008 IL5P05113 134 aa13.51□□□□□ -0.25
CHD4-201ENST00000357008 PPICP45877 212 aa13.51□□□□□ -0.25
CHD4-201ENST00000357008 GABRA4P48169 554 aa13.51□□□□□ -0.25
CHD4-201ENST00000357008 TBC1D28Q2M2D7 210 aa13.51□□□□□ -0.25
CHD4-201ENST00000357008 PRSS36Q5K4E3 855 aa13.51□□□□□ -0.25
CHD4-201ENST00000357008 LCN15Q6UWW0 184 aa13.51□□□□□ -0.25
CHD4-201ENST00000357008 ZNF485Q8NCK3 441 aa13.51□□□□□ -0.25
CHD4-201ENST00000357008 BPIFCQ8NFQ6 507 aa13.51□□□□□ -0.25
CHD4-201ENST00000357008 USB1Q9BQ65 265 aaKnown RBP13.51□□□□□ -0.25
CHD4-201ENST00000357008 S1PR5Q9H228 398 aa13.51□□□□□ -0.25
CHD4-201ENST00000357008 TBC1D29Q9UFV1 150 aa13.51□□□□□ -0.25
CHD4-201ENST00000357008 SLC5A6Q9Y289 635 aa13.51□□□□□ -0.25
CHD4-201ENST00000357008 NUMBLQ9Y6R0 609 aa13.51□□□□□ -0.25
CHD4-201ENST00000357008 QDPRP09417 244 aa13.51□□□□□ -0.25
CHD4-201ENST00000357008 MARCH1Q8TCQ1 289 aa13.51□□□□□ -0.25
CHD4-201ENST00000357008 ZNF385DQ9H6B1 395 aa13.51□□□□□ -0.25
CHD4-201ENST00000357008 KCND3Q9UK17 655 aa13.51□□□□□ -0.25
CHD4-201ENST00000357008 CTSLP07711 333 aa13.5□□□□□ -0.25
CHD4-201ENST00000357008 GUSBP08236 651 aa13.5□□□□□ -0.25
CHD4-201ENST00000357008 GLI4P10075 376 aa13.5□□□□□ -0.25
CHD4-201ENST00000357008 TM4SF4P48230 202 aa13.5□□□□□ -0.25
CHD4-201ENST00000357008 GSK3AP49840 483 aa13.5□□□□□ -0.25
CHD4-201ENST00000357008 EXT1Q16394 746 aa13.5□□□□□ -0.25
CHD4-201ENST00000357008 GPX8Q8TED1 209 aa13.5□□□□□ -0.25
CHD4-201ENST00000357008 SIGLEC11Q96RL6 698 aa13.5□□□□□ -0.25
CHD4-201ENST00000357008 CYSLTR2Q9NS75 346 aa13.5□□□□□ -0.25
CHD4-201ENST00000357008 TMEFF2Q9UIK5 374 aaPredicted RBP13.5□□□□□ -0.25
CHD4-201ENST00000357008 POMT2Q9UKY4 750 aa13.5□□□□□ -0.25
CHD4-201ENST00000357008 DOT1LQ8TEK3 1739 aa13.5□□□□□ -0.25
CHD4-201ENST00000357008 HRO43593 1189 aa13.5□□□□□ -0.25
CHD4-201ENST00000357008 ETHE1O95571 254 aa13.5□□□□□ -0.25
CHD4-201ENST00000357008 PRSS37A4D1T9 235 aa13.5□□□□□ -0.25
CHD4-201ENST00000357008 H0Y8G0 127 aa13.5□□□□□ -0.25
CHD4-201ENST00000357008 UPK1AO00322 258 aa13.5□□□□□ -0.25
CHD4-201ENST00000357008 IL3RAP26951 378 aa13.5□□□□□ -0.25
CHD4-201ENST00000357008 FAM74A1Q5RGS3 127 aa13.5□□□□□ -0.25
CHD4-201ENST00000357008 TMEM88Q6PEY1 159 aa13.5□□□□□ -0.25
CHD4-201ENST00000357008 DBX2Q6ZNG2 339 aa13.5□□□□□ -0.25
CHD4-201ENST00000357008 LHX4Q969G2 390 aa13.5□□□□□ -0.25
CHD4-201ENST00000357008 CABLES2Q9BTV7 478 aa13.5□□□□□ -0.25
CHD4-201ENST00000357008 TPPP3Q9BW30 176 aa13.5□□□□□ -0.25
CHD4-201ENST00000357008 CRYBG1Q9Y4K1 1723 aa13.5□□□□□ -0.25
CHD4-201ENST00000357008 UBE2G2P60604 165 aa13.5□□□□□ -0.25
CHD4-201ENST00000357008 KDF1Q8NAX2 398 aaPredicted RBP13.5□□□□□ -0.25
CHD4-201ENST00000357008 REEP6Q96HR9 211 aa13.5□□□□□ -0.25
CHD4-201ENST00000357008 RTL8AQ9BWD3 113 aa13.5□□□□□ -0.25
CHD4-201ENST00000357008 GPR84Q9NQS5 396 aa13.5□□□□□ -0.25
CHD4-201ENST00000357008 A0A1B0GTL3 188 aa13.5□□□□□ -0.25
CHD4-201ENST00000357008 HS3ST1O14792 307 aa13.5□□□□□ -0.25
CHD4-201ENST00000357008 ANGPTL7O43827 346 aa13.5□□□□□ -0.25
CHD4-201ENST00000357008 TCN2P20062 427 aa13.5□□□□□ -0.25
CHD4-201ENST00000357008 ZNF90Q03938 601 aa13.5□□□□□ -0.25
CHD4-201ENST00000357008 GPNMBQ14956 572 aa13.5□□□□□ -0.25
CHD4-201ENST00000357008 SLC25A35Q3KQZ1 300 aa13.5□□□□□ -0.25
CHD4-201ENST00000357008 TMEM268Q5VZI3 342 aa13.5□□□□□ -0.25
CHD4-201ENST00000357008 XAF1Q6GPH4 301 aa13.5□□□□□ -0.25
CHD4-201ENST00000357008 CORO6Q6QEF8 472 aa13.5□□□□□ -0.25
CHD4-201ENST00000357008 ZFP62Q8NB50 900 aaPredicted RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms