RNA–Protein interactions for RNA: ENST00000356922.5

LIG4-201, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-201ENST00000356922 CYSRT1A8MQ03 144 aa3.48□□□□□ -1.85
LIG4-201ENST00000356922 PRSS44E7EML9 344 aa3.48□□□□□ -1.85
LIG4-201ENST00000356922 LILRA1O75019 489 aa3.48□□□□□ -1.85
LIG4-201ENST00000356922 ABHD16AO95870 558 aa3.48□□□□□ -1.85
LIG4-201ENST00000356922 IGLV1-44P01699 117 aa3.48□□□□□ -1.85
LIG4-201ENST00000356922 HRGP04196 525 aa3.48□□□□□ -1.85
LIG4-201ENST00000356922 ZNF35P13682 527 aa3.48□□□□□ -1.85
LIG4-201ENST00000356922 AGAP20933 346 aa3.48□□□□□ -1.85
LIG4-201ENST00000356922 PSMB10P40306 273 aa3.48□□□□□ -1.85
LIG4-201ENST00000356922 PRKXP51817 358 aa3.48□□□□□ -1.85
LIG4-201ENST00000356922 PLP2Q04941 152 aa3.48□□□□□ -1.85
LIG4-201ENST00000356922 BSPH1Q075Z2 132 aa3.48□□□□□ -1.85
LIG4-201ENST00000356922 EIF2B1Q14232 305 aaKnown RBP3.48□□□□□ -1.85
LIG4-201ENST00000356922 INSL4Q14641 139 aa3.48□□□□□ -1.85
LIG4-201ENST00000356922 GSG1Q2KHT4 349 aa3.48□□□□□ -1.85
LIG4-201ENST00000356922 SNAI3Q3KNW1 292 aa3.48□□□□□ -1.85
LIG4-201ENST00000356922 TP53I3Q53FA7 332 aa3.48□□□□□ -1.85
LIG4-201ENST00000356922 C16orf87Q6PH81 154 aa3.48□□□□□ -1.85
LIG4-201ENST00000356922 LRP11Q86VZ4 500 aa3.48□□□□□ -1.85
LIG4-201ENST00000356922 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.48□□□□□ -1.85
LIG4-201ENST00000356922 ZCCHC24Q8N2G6 241 aaKnown RBP3.48□□□□□ -1.85
LIG4-201ENST00000356922 OR10H4Q8NGA5 316 aa3.48□□□□□ -1.85
LIG4-201ENST00000356922 INTS14Q96SY0 518 aa3.48□□□□□ -1.85
LIG4-201ENST00000356922 BRD7Q9NPI1 651 aa3.48□□□□□ -1.85
LIG4-201ENST00000356922 C8orf4Q9NR00 106 aa3.48□□□□□ -1.85
LIG4-201ENST00000356922 CENPMQ9NSP4 180 aa3.48□□□□□ -1.85
LIG4-201ENST00000356922 MRPS18AQ9NVS2 196 aaKnown RBP3.48□□□□□ -1.85
LIG4-201ENST00000356922 ELOVL5Q9NYP7 299 aa3.48□□□□□ -1.85
LIG4-201ENST00000356922 FZR1Q9UM11 496 aa3.48□□□□□ -1.85
LIG4-201ENST00000356922 TLN2Q9Y4G6 2542 aa3.48□□□□□ -1.85
LIG4-201ENST00000356922 ARFGEF3Q5TH69 2177 aa3.48□□□□□ -1.85
LIG4-201ENST00000356922 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.48□□□□□ -1.85
LIG4-201ENST00000356922 C5orf49A4QMS7 147 aa3.48□□□□□ -1.85
LIG4-201ENST00000356922 OR6C6A6NF89 314 aa3.48□□□□□ -1.85
LIG4-201ENST00000356922 A6NIN4 97 aa3.48□□□□□ -1.85
LIG4-201ENST00000356922 C3orf80F5H4A9 247 aa3.48□□□□□ -1.85
LIG4-201ENST00000356922 F5H5K5 113 aa3.48□□□□□ -1.85
LIG4-201ENST00000356922 GPRIN2O60269 458 aa3.48□□□□□ -1.85
LIG4-201ENST00000356922 SRSF10O75494 262 aaKnown RBP3.48□□□□□ -1.85
LIG4-201ENST00000356922 PTHP01270 115 aa3.48□□□□□ -1.85
LIG4-201ENST00000356922 IGHA1P01876 353 aa3.48□□□□□ -1.85
LIG4-201ENST00000356922 SERPINA5P05154 406 aa3.48□□□□□ -1.85
LIG4-201ENST00000356922 CST2P09228 141 aa3.48□□□□□ -1.85
LIG4-201ENST00000356922 NAT1P18440 290 aa3.48□□□□□ -1.85
LIG4-201ENST00000356922 CRYGSP22914 178 aa3.48□□□□□ -1.85
LIG4-201ENST00000356922 OPRL1P41146 370 aa3.48□□□□□ -1.85
LIG4-201ENST00000356922 ENTPD1P49961 510 aa3.48□□□□□ -1.85
LIG4-201ENST00000356922 LSM6P62312 80 aaKnown RBP3.48□□□□□ -1.85
LIG4-201ENST00000356922 HOXA4Q00056 320 aaPredicted RBP3.48□□□□□ -1.85
LIG4-201ENST00000356922 MFGE8Q08431 387 aaPredicted RBP3.48□□□□□ -1.85
LIG4-201ENST00000356922 TNK1Q13470 666 aa3.48□□□□□ -1.85
LIG4-201ENST00000356922 PPA1Q15181 289 aa3.48□□□□□ -1.85
LIG4-201ENST00000356922 ODF4Q2M2E3 257 aa3.48□□□□□ -1.85
LIG4-201ENST00000356922 TEX30Q5JUR7 227 aa3.48□□□□□ -1.85
LIG4-201ENST00000356922 SPATA46Q5T0L3 261 aa3.48□□□□□ -1.85
LIG4-201ENST00000356922 ZNF787Q6DD87 383 aa3.48□□□□□ -1.85
LIG4-201ENST00000356922 OR7E24Q6IFN5 339 aa3.48□□□□□ -1.85
LIG4-201ENST00000356922 ADAM5Q6NVV9 412 aa3.48□□□□□ -1.85
LIG4-201ENST00000356922 SLC16A9Q7RTY1 509 aa3.48□□□□□ -1.85
LIG4-201ENST00000356922 COMMD2Q86X83 199 aa3.48□□□□□ -1.85
LIG4-201ENST00000356922 DEPDC4Q8N2C3 294 aa3.48□□□□□ -1.85
LIG4-201ENST00000356922 ZFP41Q8N8Y5 198 aa3.48□□□□□ -1.85
LIG4-201ENST00000356922 ZNF540Q8NDQ6 660 aa3.48□□□□□ -1.85
LIG4-201ENST00000356922 SLAMF6Q96DU3 332 aa3.48□□□□□ -1.85
LIG4-201ENST00000356922 DCLRE1CQ96SD1 692 aaKnown RBP3.48□□□□□ -1.85
LIG4-201ENST00000356922 CCNB1IP1Q9NPC3 277 aa3.48□□□□□ -1.85
LIG4-201ENST00000356922 ACOXLQ9NUZ1 547 aa3.48□□□□□ -1.85
LIG4-201ENST00000356922 CLN6Q9NWW5 311 aa3.48□□□□□ -1.85
LIG4-201ENST00000356922 ERVK13-1Q9NX77 482 aa3.48□□□□□ -1.85
LIG4-201ENST00000356922 PLEK2Q9NYT0 353 aa3.48□□□□□ -1.85
LIG4-201ENST00000356922 FLNAP21333 2647 aaKnown RBP3.48□□□□□ -1.85
LIG4-201ENST00000356922 TRIM64A6NGJ6 449 aa3.48□□□□□ -1.85
LIG4-201ENST00000356922 OR6C65A6NJZ3 312 aa3.48□□□□□ -1.85
LIG4-201ENST00000356922 SLC22A31A6NKX4 558 aa3.48□□□□□ -1.85
LIG4-201ENST00000356922 ATP6V1G2-DDX39BF2Z307 99 aa3.48□□□□□ -1.85
LIG4-201ENST00000356922 M0R1B8 84 aa3.48□□□□□ -1.85
LIG4-201ENST00000356922 LMX1BO60663 402 aa3.48□□□□□ -1.85
LIG4-201ENST00000356922 MT-ND2P03891 347 aa3.48□□□□□ -1.85
LIG4-201ENST00000356922 FAM157BP0CG42 384 aa3.48□□□□□ -1.85
LIG4-201ENST00000356922 NPR2P20594 1047 aa3.48□□□□□ -1.85
LIG4-201ENST00000356922 STOMP27105 288 aa3.48□□□□□ -1.85
LIG4-201ENST00000356922 TMED1Q13445 227 aa3.48□□□□□ -1.85
LIG4-201ENST00000356922 IL18R1Q13478 541 aa3.48□□□□□ -1.85
LIG4-201ENST00000356922 MED21Q13503 144 aa3.48□□□□□ -1.85
LIG4-201ENST00000356922 HLXQ14774 488 aaPredicted RBP3.48□□□□□ -1.85
LIG4-201ENST00000356922 KRTAP27-1Q3LI81 207 aa3.48□□□□□ -1.85
LIG4-201ENST00000356922 SLC35D3Q5M8T2 416 aa3.48□□□□□ -1.85
LIG4-201ENST00000356922 SLC35F2Q8IXU6 374 aa3.48□□□□□ -1.85
LIG4-201ENST00000356922 ALDH16A1Q8IZ83 802 aa3.48□□□□□ -1.85
LIG4-201ENST00000356922 PRSS35Q8N3Z0 413 aa3.48□□□□□ -1.85
LIG4-201ENST00000356922 OR10AC1Q8NH08 325 aa3.48□□□□□ -1.85
LIG4-201ENST00000356922 OR2AE1Q8NHA4 323 aa3.48□□□□□ -1.85
LIG4-201ENST00000356922 RNF133Q8WVZ7 376 aa3.48□□□□□ -1.85
LIG4-201ENST00000356922 GATAD2BQ8WXI9 593 aa3.48□□□□□ -1.85
LIG4-201ENST00000356922 RORBQ92753 470 aa3.48□□□□□ -1.85
LIG4-201ENST00000356922 PELI1Q96FA3 418 aa3.48□□□□□ -1.85
LIG4-201ENST00000356922 NGBQ9NPG2 151 aa3.48□□□□□ -1.85
LIG4-201ENST00000356922 PLCXD1Q9NUJ7 323 aa3.48□□□□□ -1.85
LIG4-201ENST00000356922 MYEF2Q9P2K5 600 aaKnown RBP3.48□□□□□ -1.85
LIG4-201ENST00000356922 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms