RNA–Protein interactions for RNA: ENST00000356657.10

FDPS-201, Transcript of farnesyl diphosphate synthase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FDPS, Length 1,478 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-201ENST00000356657 KLHL22Q53GT1 634 aa13.84□□□□□ -0.19
FDPS-201ENST00000356657 MYPOPQ86VE0 399 aaPredicted RBP13.84□□□□□ -0.19
FDPS-201ENST00000356657 OR51G2Q8NGK0 314 aa13.84□□□□□ -0.19
FDPS-201ENST00000356657 MRPL48Q96GC5 212 aaKnown RBP13.84□□□□□ -0.19
FDPS-201ENST00000356657 HS3ST6Q96QI5 342 aa13.84□□□□□ -0.19
FDPS-201ENST00000356657 ABHD6Q9BV23 337 aa13.84□□□□□ -0.19
FDPS-201ENST00000356657 SP140LQ9H930 580 aa13.84□□□□□ -0.19
FDPS-201ENST00000356657 MRPS18AQ9NVS2 196 aaKnown RBP13.84□□□□□ -0.19
FDPS-201ENST00000356657 RAI1Q7Z5J4 1906 aaPredicted RBP13.84□□□□□ -0.19
FDPS-201ENST00000356657 APCP25054 2843 aa13.83□□□□□ -0.19
FDPS-201ENST00000356657 LOC100509620A0A075B734 347 aa13.83□□□□□ -0.2
FDPS-201ENST00000356657 ZNF670-ZNF695F2Z2N8 137 aa13.83□□□□□ -0.2
FDPS-201ENST00000356657 HS3ST1O14792 307 aa13.83□□□□□ -0.2
FDPS-201ENST00000356657 ZNF254O75437 659 aa13.83□□□□□ -0.2
FDPS-201ENST00000356657 WBP4O75554 376 aaKnown RBP13.83□□□□□ -0.2
FDPS-201ENST00000356657 CLIC3O95833 236 aa13.83□□□□□ -0.2
FDPS-201ENST00000356657 FADS2O95864 444 aaKnown RBP13.83□□□□□ -0.2
FDPS-201ENST00000356657 GNAO1P09471 354 aa13.83□□□□□ -0.2
FDPS-201ENST00000356657 DBTP11182 482 aaKnown RBP13.83□□□□□ -0.2
FDPS-201ENST00000356657 MYF6P23409 242 aa13.83□□□□□ -0.2
FDPS-201ENST00000356657 CALCRP30988 508 aa13.83□□□□□ -0.2
FDPS-201ENST00000356657 DCTDP32321 178 aa13.83□□□□□ -0.2
FDPS-201ENST00000356657 GLRXP35754 106 aa13.83□□□□□ -0.2
FDPS-201ENST00000356657 TPTEP56180 551 aa13.83□□□□□ -0.2
FDPS-201ENST00000356657 CXCR4P61073 352 aa13.83□□□□□ -0.2
FDPS-201ENST00000356657 NKX6-1P78426 367 aaPredicted RBP13.83□□□□□ -0.2
FDPS-201ENST00000356657 ROM1Q03395 351 aa13.83□□□□□ -0.2
FDPS-201ENST00000356657 ZNF91Q05481 1191 aa13.83□□□□□ -0.2
FDPS-201ENST00000356657 EGR3Q06889 387 aa13.83□□□□□ -0.2
FDPS-201ENST00000356657 DBPQ10586 325 aaPredicted RBP13.83□□□□□ -0.2
FDPS-201ENST00000356657 KRTAP27-1Q3LI81 207 aa13.83□□□□□ -0.2
FDPS-201ENST00000356657 C6orf52Q5T4I8 152 aa13.83□□□□□ -0.2
FDPS-201ENST00000356657 SLC35F2Q8IXU6 374 aa13.83□□□□□ -0.2
FDPS-201ENST00000356657 ZNF611Q8N823 705 aa13.83□□□□□ -0.2
FDPS-201ENST00000356657 KBTBD8Q8NFY9 601 aa13.83□□□□□ -0.2
FDPS-201ENST00000356657 APH1BQ8WW43 257 aa13.83□□□□□ -0.2
FDPS-201ENST00000356657 RNFT2Q96EX2 444 aa13.83□□□□□ -0.2
FDPS-201ENST00000356657 COPS4Q9BT78 406 aa13.83□□□□□ -0.2
FDPS-201ENST00000356657 MROQ9BYG7 248 aa13.83□□□□□ -0.2
FDPS-201ENST00000356657 INPP5EQ9NRR6 644 aa13.83□□□□□ -0.2
FDPS-201ENST00000356657 TACC2O95359 2948 aa13.83□□□□□ -0.2
FDPS-201ENST00000356657 AKAP6Q13023 2319 aa13.83□□□□□ -0.2
FDPS-201ENST00000356657 ANKRD17O75179 2603 aaKnown RBP13.83□□□□□ -0.2
FDPS-201ENST00000356657 ITPR2Q14571 2701 aa13.82□□□□□ -0.2
FDPS-201ENST00000356657 ABHD16AO95870 558 aa13.82□□□□□ -0.2
FDPS-201ENST00000356657 RPS27P42677 84 aaKnown RBP13.82□□□□□ -0.2
FDPS-201ENST00000356657 TAF13Q15543 124 aa13.82□□□□□ -0.2
FDPS-201ENST00000356657 DRAM2Q6UX65 266 aa13.82□□□□□ -0.2
FDPS-201ENST00000356657 B3GLCTQ6Y288 498 aa13.82□□□□□ -0.2
FDPS-201ENST00000356657 OR5L1Q8NGL2 311 aa13.82□□□□□ -0.2
FDPS-201ENST00000356657 THEM6Q8WUY1 208 aa13.82□□□□□ -0.2
FDPS-201ENST00000356657 AKAP1Q92667 903 aaKnown RBP eCLIP13.82□□□□□ -0.2
FDPS-201ENST00000356657 APOBEC3DQ96AK3 386 aaPredicted RBP13.82□□□□□ -0.2
FDPS-201ENST00000356657 C4orf45Q96LM5 186 aa13.82□□□□□ -0.2
FDPS-201ENST00000356657 KCNJ15Q99712 375 aa13.82□□□□□ -0.2
FDPS-201ENST00000356657 DHRS9Q9BPW9 319 aa13.82□□□□□ -0.2
FDPS-201ENST00000356657 PLEKHF2Q9H8W4 249 aa13.82□□□□□ -0.2
FDPS-201ENST00000356657 CA10Q9NS85 328 aa13.82□□□□□ -0.2
FDPS-201ENST00000356657 PLCXD1Q9NUJ7 323 aa13.82□□□□□ -0.2
FDPS-201ENST00000356657 CISD1Q9NZ45 108 aaKnown RBP13.82□□□□□ -0.2
FDPS-201ENST00000356657 EXOGQ9Y2C4 368 aaKnown RBP13.82□□□□□ -0.2
FDPS-201ENST00000356657 M0R135 149 aa13.81□□□□□ -0.2
FDPS-201ENST00000356657 MRPL3P09001 348 aaKnown RBP13.81□□□□□ -0.2
FDPS-201ENST00000356657 CCNOP22674 350 aa13.81□□□□□ -0.2
FDPS-201ENST00000356657 HSD11B1P28845 292 aa13.81□□□□□ -0.2
FDPS-201ENST00000356657 APOBEC3AP31941 199 aaPredicted RBP13.81□□□□□ -0.2
FDPS-201ENST00000356657 OPRL1P41146 370 aa13.81□□□□□ -0.2
FDPS-201ENST00000356657 UCP2P55851 309 aa13.81□□□□□ -0.2
FDPS-201ENST00000356657 SPOCK1Q08629 439 aa13.81□□□□□ -0.2
FDPS-201ENST00000356657 CDK5R2Q13319 367 aa13.81□□□□□ -0.2
FDPS-201ENST00000356657 SNTB2Q13425 540 aaKnown RBP13.81□□□□□ -0.2
FDPS-201ENST00000356657 OTPQ5XKR4 325 aa13.81□□□□□ -0.2
FDPS-201ENST00000356657 TMEM154Q6P9G4 183 aa13.81□□□□□ -0.2
FDPS-201ENST00000356657 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.81□□□□□ -0.2
FDPS-201ENST00000356657 ZNF679Q8IYX0 411 aa13.81□□□□□ -0.2
FDPS-201ENST00000356657 ACBD7Q8N6N7 88 aa13.81□□□□□ -0.2
FDPS-201ENST00000356657 OR10S1Q8NGN2 331 aa13.81□□□□□ -0.2
FDPS-201ENST00000356657 ZNF799Q96GE5 643 aa13.81□□□□□ -0.2
FDPS-201ENST00000356657 CNOT2Q9NZN8 540 aaKnown RBP13.81□□□□□ -0.2
FDPS-201ENST00000356657 ATP23Q9Y6H3 246 aa13.81□□□□□ -0.2
FDPS-201ENST00000356657 CACNA1DQ01668 2161 aa13.81□□□□□ -0.2
FDPS-201ENST00000356657 DSCAMO60469 2012 aa13.81□□□□□ -0.2
FDPS-201ENST00000356657 SMPD2O60906 423 aa13.8□□□□□ -0.2
FDPS-201ENST00000356657 SULT1C4O75897 302 aa13.8□□□□□ -0.2
FDPS-201ENST00000356657 H2BFMP0C1H6 154 aa13.8□□□□□ -0.2
FDPS-201ENST00000356657 PSKH1P11801 424 aa13.8□□□□□ -0.2
FDPS-201ENST00000356657 PIPP12273 146 aaPredicted RBP13.8□□□□□ -0.2
FDPS-201ENST00000356657 DCKP27707 260 aa13.8□□□□□ -0.2
FDPS-201ENST00000356657 ACTA2P62736 377 aa13.8□□□□□ -0.2
FDPS-201ENST00000356657 ACTG2P63267 376 aa13.8□□□□□ -0.2
FDPS-201ENST00000356657 HGFACQ04756 655 aa13.8□□□□□ -0.2
FDPS-201ENST00000356657 MED21Q13503 144 aa13.8□□□□□ -0.2
FDPS-201ENST00000356657 ZNF322Q6U7Q0 402 aaPredicted RBP13.8□□□□□ -0.2
FDPS-201ENST00000356657 COLCA1Q6ZS62 124 aa13.8□□□□□ -0.2
FDPS-201ENST00000356657 KCTD20Q7Z5Y7 419 aa13.8□□□□□ -0.2
FDPS-201ENST00000356657 KRT77Q7Z794 578 aa13.8□□□□□ -0.2
FDPS-201ENST00000356657 CNIH3Q8TBE1 160 aa13.8□□□□□ -0.2
FDPS-201ENST00000356657 HAVCR2Q8TDQ0 301 aa13.8□□□□□ -0.2
FDPS-201ENST00000356657 ITFG2Q969R8 447 aa13.8□□□□□ -0.2
FDPS-201ENST00000356657 OR8B4Q96RC9 309 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms