RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 SUMO3P55854 103 aaPredicted RBP5.05□□□□□ -1.6
PTPRD-202ENST00000356435 CSNK1G2P78368 415 aa5.05□□□□□ -1.6
PTPRD-202ENST00000356435 ZNF85Q03923 595 aa5.05□□□□□ -1.6
PTPRD-202ENST00000356435 Q56UQ5 140 aa5.05□□□□□ -1.6
PTPRD-202ENST00000356435 GLYATL3Q5SZD4 288 aa5.05□□□□□ -1.6
PTPRD-202ENST00000356435 ALKAL1Q6UXT8 129 aa5.05□□□□□ -1.6
PTPRD-202ENST00000356435 LSMEM1Q8N8F7 131 aa5.05□□□□□ -1.6
PTPRD-202ENST00000356435 GHSRQ92847 366 aa5.05□□□□□ -1.6
PTPRD-202ENST00000356435 MVB12AQ96EY5 273 aa5.05□□□□□ -1.6
PTPRD-202ENST00000356435 FAM173AQ9BQD7 235 aa5.05□□□□□ -1.6
PTPRD-202ENST00000356435 AMBRA1Q9C0C7 1298 aa5.05□□□□□ -1.6
PTPRD-202ENST00000356435 SLIRPQ9GZT3 109 aaKnown RBP5.05□□□□□ -1.6
PTPRD-202ENST00000356435 GPR37O15354 613 aa5.05□□□□□ -1.6
PTPRD-202ENST00000356435 ICOSLGO75144 302 aa5.05□□□□□ -1.6
PTPRD-202ENST00000356435 GASTP01350 101 aa5.05□□□□□ -1.6
PTPRD-202ENST00000356435 FBP1P09467 338 aa5.05□□□□□ -1.6
PTPRD-202ENST00000356435 NUDT7P0C024 238 aa5.05□□□□□ -1.6
PTPRD-202ENST00000356435 CD22P20273 847 aa5.05□□□□□ -1.6
PTPRD-202ENST00000356435 AFMIDQ63HM1 303 aa5.05□□□□□ -1.6
PTPRD-202ENST00000356435 DESI1Q6ICB0 168 aa5.05□□□□□ -1.6
PTPRD-202ENST00000356435 PLPP6Q8IY26 295 aa5.05□□□□□ -1.6
PTPRD-202ENST00000356435 KDM8Q8N371 416 aa5.05□□□□□ -1.6
PTPRD-202ENST00000356435 OR8U1Q8NH10 309 aa5.05□□□□□ -1.6
PTPRD-202ENST00000356435 OR2V1Q8NHB1 315 aa5.05□□□□□ -1.6
PTPRD-202ENST00000356435 TRMT61AQ96FX7 289 aaKnown RBP5.05□□□□□ -1.6
PTPRD-202ENST00000356435 ELF4Q99607 663 aaPredicted RBP5.05□□□□□ -1.6
PTPRD-202ENST00000356435 GJB3O75712 270 aa5.05□□□□□ -1.6
PTPRD-202ENST00000356435 THBS1P07996 1170 aa5.05□□□□□ -1.6
PTPRD-202ENST00000356435 RPA2P15927 270 aa5.05□□□□□ -1.6
PTPRD-202ENST00000356435 GIPRP48546 466 aa5.05□□□□□ -1.6
PTPRD-202ENST00000356435 TRA2AQ13595 282 aaKnown RBP eCLIP5.05□□□□□ -1.6
PTPRD-202ENST00000356435 HFEQ30201 348 aa5.05□□□□□ -1.6
PTPRD-202ENST00000356435 ZNF750Q32MQ0 723 aa5.05□□□□□ -1.6
PTPRD-202ENST00000356435 PLK5Q496M5 336 aa5.05□□□□□ -1.6
PTPRD-202ENST00000356435 PYCR3Q53H96 274 aa5.05□□□□□ -1.6
PTPRD-202ENST00000356435 XKR7Q5GH72 579 aa5.05□□□□□ -1.6
PTPRD-202ENST00000356435 RPL7L1Q6DKI1 246 aaKnown RBP5.05□□□□□ -1.6
PTPRD-202ENST00000356435 RNF165Q6ZSG1 346 aa5.05□□□□□ -1.6
PTPRD-202ENST00000356435 THNSL2Q86YJ6 484 aa5.05□□□□□ -1.6
PTPRD-202ENST00000356435 SLC7A5P1Q8MH63 180 aa5.05□□□□□ -1.6
PTPRD-202ENST00000356435 BAHD1Q8TBE0 780 aaPredicted RBP5.05□□□□□ -1.6
PTPRD-202ENST00000356435 EDARADDQ8WWZ3 215 aa5.05□□□□□ -1.6
PTPRD-202ENST00000356435 PINX1Q96BK5 328 aaKnown RBP5.05□□□□□ -1.6
PTPRD-202ENST00000356435 UQCC2Q9BRT2 126 aa5.05□□□□□ -1.6
PTPRD-202ENST00000356435 FOXQ1Q9C009 403 aa5.05□□□□□ -1.6
PTPRD-202ENST00000356435 POFUT1Q9H488 388 aa5.05□□□□□ -1.6
PTPRD-202ENST00000356435 C19orf53Q9UNZ5 99 aaPredicted RBP5.05□□□□□ -1.6
PTPRD-202ENST00000356435 A0A096LPE4 126 aa5.04□□□□□ -1.6
PTPRD-202ENST00000356435 A0A1W2PPZ6 126 aa5.04□□□□□ -1.6
PTPRD-202ENST00000356435 S100A8P05109 93 aa5.04□□□□□ -1.6
PTPRD-202ENST00000356435 TESK1Q15569 626 aa5.04□□□□□ -1.6
PTPRD-202ENST00000356435 HLA-BQ31612 363 aa5.04□□□□□ -1.6
PTPRD-202ENST00000356435 ZNF385BQ569K4 471 aa5.04□□□□□ -1.6
PTPRD-202ENST00000356435 HIST2H3AQ71DI3 136 aa5.04□□□□□ -1.6
PTPRD-202ENST00000356435 ADGRF3Q8IZF5 1079 aa5.04□□□□□ -1.6
PTPRD-202ENST00000356435 TMEM130Q8N3G9 435 aa5.04□□□□□ -1.6
PTPRD-202ENST00000356435 LKAAEAR1Q8TD35 194 aa5.04□□□□□ -1.6
PTPRD-202ENST00000356435 PELI1Q96FA3 418 aa5.04□□□□□ -1.6
PTPRD-202ENST00000356435 FYTTD1Q96QD9 318 aaKnown RBP5.04□□□□□ -1.6
PTPRD-202ENST00000356435 ATOH8Q96SQ7 321 aa5.04□□□□□ -1.6
PTPRD-202ENST00000356435 CHRDL1Q9BU40 450 aa5.04□□□□□ -1.6
PTPRD-202ENST00000356435 GLIPR2Q9H4G4 154 aa5.04□□□□□ -1.6
PTPRD-202ENST00000356435 SSC5DA1L4H1 1573 aa5.04□□□□□ -1.6
PTPRD-202ENST00000356435 FRG2CA6NGY1 282 aa5.04□□□□□ -1.6
PTPRD-202ENST00000356435 ZFP92A6NM28 416 aa5.04□□□□□ -1.6
PTPRD-202ENST00000356435 OR2J2O76002 312 aa5.04□□□□□ -1.6
PTPRD-202ENST00000356435 QDPRP09417 244 aa5.04□□□□□ -1.6
PTPRD-202ENST00000356435 HOXA4Q00056 320 aaPredicted RBP5.04□□□□□ -1.6
PTPRD-202ENST00000356435 COL19A1Q14993 1142 aa5.04□□□□□ -1.6
PTPRD-202ENST00000356435 HSD17B11Q8NBQ5 300 aa5.04□□□□□ -1.6
PTPRD-202ENST00000356435 KLHDC9Q8NEP7 349 aa5.04□□□□□ -1.6
PTPRD-202ENST00000356435 OR52H1Q8NGJ2 320 aa5.04□□□□□ -1.6
PTPRD-202ENST00000356435 AAMDCQ9H7C9 122 aa5.04□□□□□ -1.6
PTPRD-202ENST00000356435 COL24A1Q17RW2 1714 aa5.04□□□□□ -1.6
PTPRD-202ENST00000356435 M0R135 149 aa5.04□□□□□ -1.6
PTPRD-202ENST00000356435 MT-CO3P00414 261 aa5.04□□□□□ -1.6
PTPRD-202ENST00000356435 MBP02144 154 aa5.04□□□□□ -1.6
PTPRD-202ENST00000356435 CHRM2P08172 466 aa5.04□□□□□ -1.6
PTPRD-202ENST00000356435 GP2P55259 537 aaKnown RBP5.04□□□□□ -1.6
PTPRD-202ENST00000356435 ACOT6Q3I5F7 207 aaPredicted RBP5.04□□□□□ -1.6
PTPRD-202ENST00000356435 SOHLH1Q5JUK2 328 aa5.04□□□□□ -1.6
PTPRD-202ENST00000356435 SUMF1Q8NBK3 374 aa5.04□□□□□ -1.6
PTPRD-202ENST00000356435 DEFB108BQ8NET1 73 aa5.04□□□□□ -1.6
PTPRD-202ENST00000356435 OR13C8Q8NGS7 320 aa5.04□□□□□ -1.6
PTPRD-202ENST00000356435 RNF141Q8WVD5 230 aa5.04□□□□□ -1.6
PTPRD-202ENST00000356435 SLAMF6Q96DU3 332 aa5.04□□□□□ -1.6
PTPRD-202ENST00000356435 ZNF799Q96GE5 643 aa5.04□□□□□ -1.6
PTPRD-202ENST00000356435 NRSN2Q9GZP1 204 aa5.04□□□□□ -1.6
PTPRD-202ENST00000356435 C2CD4DB7Z1M9 353 aa5.04□□□□□ -1.6
PTPRD-202ENST00000356435 SCG5P05408 212 aa5.04□□□□□ -1.6
PTPRD-202ENST00000356435 PSMB1P20618 241 aaKnown RBP5.04□□□□□ -1.6
PTPRD-202ENST00000356435 NME2P22392 152 aa5.04□□□□□ -1.6
PTPRD-202ENST00000356435 DPTQ07507 201 aa5.04□□□□□ -1.6
PTPRD-202ENST00000356435 SPEM2Q0P670 501 aa5.04□□□□□ -1.6
PTPRD-202ENST00000356435 IHHQ14623 411 aa5.04□□□□□ -1.6
PTPRD-202ENST00000356435 MOB1BQ7L9L4 216 aa5.04□□□□□ -1.6
PTPRD-202ENST00000356435 CDH26Q8IXH8 852 aa5.04□□□□□ -1.6
PTPRD-202ENST00000356435 TCTE3Q8IZS6 198 aa5.04□□□□□ -1.6
PTPRD-202ENST00000356435 PARP16Q8N5Y8 322 aa5.04□□□□□ -1.6
PTPRD-202ENST00000356435 OR2M7Q8NG81 312 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms