RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 UCP2P55851 309 aa13.44□□□□□ -0.26
TRIM13-201ENST00000356017 TPTEP56180 551 aa13.44□□□□□ -0.26
TRIM13-201ENST00000356017 CXCR4P61073 352 aa13.44□□□□□ -0.26
TRIM13-201ENST00000356017 SMN1Q16637 294 aaKnown RBP13.44□□□□□ -0.26
TRIM13-201ENST00000356017 ZNF672Q499Z4 452 aaPredicted RBP13.44□□□□□ -0.26
TRIM13-201ENST00000356017 DEGS2Q6QHC5 323 aa13.44□□□□□ -0.26
TRIM13-201ENST00000356017 OR10H4Q8NGA5 316 aa13.44□□□□□ -0.26
TRIM13-201ENST00000356017 SMAP2Q8WU79 429 aaPredicted RBP13.44□□□□□ -0.26
TRIM13-201ENST00000356017 AKAP1Q92667 903 aaKnown RBP eCLIP13.44□□□□□ -0.26
TRIM13-201ENST00000356017 MROQ9BYG7 248 aa13.44□□□□□ -0.26
TRIM13-201ENST00000356017 BCL2L14Q9BZR8 327 aa13.44□□□□□ -0.26
TRIM13-201ENST00000356017 NIPAL2Q9H841 368 aa13.44□□□□□ -0.26
TRIM13-201ENST00000356017 CISD1Q9NZ45 108 aaKnown RBP13.44□□□□□ -0.26
TRIM13-201ENST00000356017 ATP23Q9Y6H3 246 aa13.44□□□□□ -0.26
TRIM13-201ENST00000356017 UTP20O75691 2785 aaKnown RBP13.44□□□□□ -0.26
TRIM13-201ENST00000356017 F5H5K5 113 aa13.43□□□□□ -0.26
TRIM13-201ENST00000356017 ABHD16AO95870 558 aa13.43□□□□□ -0.26
TRIM13-201ENST00000356017 H2BFMP0C1H6 154 aa13.43□□□□□ -0.26
TRIM13-201ENST00000356017 TUBG1P23258 451 aa13.43□□□□□ -0.26
TRIM13-201ENST00000356017 HSD11B1P28845 292 aa13.43□□□□□ -0.26
TRIM13-201ENST00000356017 OTX1P32242 354 aaPredicted RBP13.43□□□□□ -0.26
TRIM13-201ENST00000356017 HCCSP53701 268 aa13.43□□□□□ -0.26
TRIM13-201ENST00000356017 RPS23P62266 143 aaKnown RBP13.43□□□□□ -0.26
TRIM13-201ENST00000356017 ROM1Q03395 351 aa13.43□□□□□ -0.26
TRIM13-201ENST00000356017 HGFACQ04756 655 aa13.43□□□□□ -0.26
TRIM13-201ENST00000356017 EGR3Q06889 387 aa13.43□□□□□ -0.26
TRIM13-201ENST00000356017 KRTAP27-1Q3LI81 207 aa13.43□□□□□ -0.26
TRIM13-201ENST00000356017 KRT80Q6KB66 452 aa13.43□□□□□ -0.26
TRIM13-201ENST00000356017 KRT77Q7Z794 578 aa13.43□□□□□ -0.26
TRIM13-201ENST00000356017 PAQR4Q8N4S7 273 aaPredicted RBP13.43□□□□□ -0.26
TRIM13-201ENST00000356017 FBXW5Q969U6 566 aa13.43□□□□□ -0.26
TRIM13-201ENST00000356017 LGALS12Q96DT0 336 aa13.43□□□□□ -0.26
TRIM13-201ENST00000356017 COG8Q96MW5 612 aa13.43□□□□□ -0.26
TRIM13-201ENST00000356017 KCNJ15Q99712 375 aa13.43□□□□□ -0.26
TRIM13-201ENST00000356017 TUBG2Q9NRH3 451 aa13.43□□□□□ -0.26
TRIM13-201ENST00000356017 TBCCD1Q9NVR7 557 aa13.43□□□□□ -0.26
TRIM13-201ENST00000356017 GRIP1Q9Y3R0 1128 aa13.43□□□□□ -0.26
TRIM13-201ENST00000356017 PRR14LQ5THK1 2151 aa13.43□□□□□ -0.26
TRIM13-201ENST00000356017 M0R135 149 aa13.42□□□□□ -0.26
TRIM13-201ENST00000356017 ZNF254O75437 659 aa13.42□□□□□ -0.26
TRIM13-201ENST00000356017 APOL3O95236 402 aa13.42□□□□□ -0.26
TRIM13-201ENST00000356017 GLRXP35754 106 aa13.42□□□□□ -0.26
TRIM13-201ENST00000356017 OPRL1P41146 370 aa13.42□□□□□ -0.26
TRIM13-201ENST00000356017 NKX6-1P78426 367 aaPredicted RBP13.42□□□□□ -0.26
TRIM13-201ENST00000356017 SNTB2Q13425 540 aaKnown RBP13.42□□□□□ -0.26
TRIM13-201ENST00000356017 ZNF322Q6U7Q0 402 aaPredicted RBP13.42□□□□□ -0.26
TRIM13-201ENST00000356017 SPATC1Q76KD6 591 aa13.42□□□□□ -0.26
TRIM13-201ENST00000356017 ZNF679Q8IYX0 411 aa13.42□□□□□ -0.26
TRIM13-201ENST00000356017 ACBD7Q8N6N7 88 aa13.42□□□□□ -0.26
TRIM13-201ENST00000356017 LILRB1Q8NHL6 650 aaPredicted RBP13.42□□□□□ -0.26
TRIM13-201ENST00000356017 SLC7A6Q92536 515 aa13.42□□□□□ -0.26
TRIM13-201ENST00000356017 MRPL48Q96GC5 212 aaKnown RBP13.42□□□□□ -0.26
TRIM13-201ENST00000356017 ZNF799Q96GE5 643 aa13.42□□□□□ -0.26
TRIM13-201ENST00000356017 AMELYQ99218 206 aa13.42□□□□□ -0.26
TRIM13-201ENST00000356017 ZNF442Q9H7R0 627 aa13.42□□□□□ -0.26
TRIM13-201ENST00000356017 INPP5EQ9NRR6 644 aa13.42□□□□□ -0.26
TRIM13-201ENST00000356017 CA10Q9NS85 328 aa13.42□□□□□ -0.26
TRIM13-201ENST00000356017 PLCXD1Q9NUJ7 323 aa13.42□□□□□ -0.26
TRIM13-201ENST00000356017 FAIMQ9NVQ4 179 aa13.42□□□□□ -0.26
TRIM13-201ENST00000356017 COPS3Q9UNS2 423 aa13.42□□□□□ -0.26
TRIM13-201ENST00000356017 KLHDC2Q9Y2U9 406 aa13.42□□□□□ -0.26
TRIM13-201ENST00000356017 A0A1W2PPR1 153 aa13.42□□□□□ -0.26
TRIM13-201ENST00000356017 A0A1W2PQL4 384 aaPredicted RBP13.42□□□□□ -0.26
TRIM13-201ENST00000356017 J3QRE1 110 aa13.42□□□□□ -0.26
TRIM13-201ENST00000356017 HS3ST1O14792 307 aa13.42□□□□□ -0.26
TRIM13-201ENST00000356017 DENRO43583 198 aaKnown RBP13.42□□□□□ -0.26
TRIM13-201ENST00000356017 DBHP09172 617 aa13.42□□□□□ -0.26
TRIM13-201ENST00000356017 FAM157BP0CG42 384 aa13.42□□□□□ -0.26
TRIM13-201ENST00000356017 RSPO1Q2MKA7 263 aaPredicted RBP13.42□□□□□ -0.26
TRIM13-201ENST00000356017 ZNF544Q6NX49 715 aa13.42□□□□□ -0.26
TRIM13-201ENST00000356017 DRAM2Q6UX65 266 aa13.42□□□□□ -0.26
TRIM13-201ENST00000356017 OR5L1Q8NGL2 311 aa13.42□□□□□ -0.26
TRIM13-201ENST00000356017 APOBEC3DQ96AK3 386 aaPredicted RBP13.42□□□□□ -0.26
TRIM13-201ENST00000356017 CNBD2Q96M20 576 aa13.42□□□□□ -0.26
TRIM13-201ENST00000356017 OR8B4Q96RC9 309 aa13.42□□□□□ -0.26
TRIM13-201ENST00000356017 DHRS9Q9BPW9 319 aa13.42□□□□□ -0.26
TRIM13-201ENST00000356017 PLEKHF2Q9H8W4 249 aa13.42□□□□□ -0.26
TRIM13-201ENST00000356017 SP140LQ9H930 580 aa13.42□□□□□ -0.26
TRIM13-201ENST00000356017 EDARQ9UNE0 448 aa13.42□□□□□ -0.26
TRIM13-201ENST00000356017 PTPN13Q12923 2485 aa13.42□□□□□ -0.26
TRIM13-201ENST00000356017 DAPL1A0PJW8 107 aa13.41□□□□□ -0.26
TRIM13-201ENST00000356017 EFCAB10A6NFE3 127 aa13.41□□□□□ -0.26
TRIM13-201ENST00000356017 E7EQL1 145 aa13.41□□□□□ -0.26
TRIM13-201ENST00000356017 SMPD2O60906 423 aa13.41□□□□□ -0.26
TRIM13-201ENST00000356017 ACSM4P0C7M7 580 aa13.41□□□□□ -0.26
TRIM13-201ENST00000356017 DCKP27707 260 aa13.41□□□□□ -0.26
TRIM13-201ENST00000356017 APOBEC3AP31941 199 aaPredicted RBP13.41□□□□□ -0.26
TRIM13-201ENST00000356017 DCTDP32321 178 aa13.41□□□□□ -0.26
TRIM13-201ENST00000356017 WNT5AP41221 380 aa13.41□□□□□ -0.26
TRIM13-201ENST00000356017 SLC6A9P48067 706 aa13.41□□□□□ -0.26
TRIM13-201ENST00000356017 C6orf141Q5SZD1 244 aa13.41□□□□□ -0.26
TRIM13-201ENST00000356017 LRRN1Q6UXK5 716 aa13.41□□□□□ -0.26
TRIM13-201ENST00000356017 ZNF101Q8IZC7 436 aa13.41□□□□□ -0.26
TRIM13-201ENST00000356017 ZNF611Q8N823 705 aa13.41□□□□□ -0.26
TRIM13-201ENST00000356017 BPIFB6Q8NFQ5 453 aa13.41□□□□□ -0.26
TRIM13-201ENST00000356017 ABHD4Q8TB40 342 aa13.41□□□□□ -0.26
TRIM13-201ENST00000356017 SNX33Q8WV41 574 aa13.41□□□□□ -0.26
TRIM13-201ENST00000356017 TBX5Q99593 518 aa13.41□□□□□ -0.26
TRIM13-201ENST00000356017 C1QTNF5Q9BXJ0 243 aa13.41□□□□□ -0.26
TRIM13-201ENST00000356017 SCN3BQ9NY72 215 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms