RNA–Protein interactions for RNA: ENST00000355766.5

VPS13A-201, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-201ENST00000355766 PLGLB1Q02325 96 aa6.12□□□□□ -1.43
VPS13A-201ENST00000355766 HGFACQ04756 655 aa6.12□□□□□ -1.43
VPS13A-201ENST00000355766 GLO1Q04760 184 aa6.12□□□□□ -1.43
VPS13A-201ENST00000355766 PIGFQ07326 219 aa6.12□□□□□ -1.43
VPS13A-201ENST00000355766 KRTAP1-1Q07627 177 aa6.12□□□□□ -1.43
VPS13A-201ENST00000355766 ARMCX4Q5H9R4 360 aa6.12□□□□□ -1.43
VPS13A-201ENST00000355766 EEF1A1P5Q5VTE0 462 aa6.12□□□□□ -1.43
VPS13A-201ENST00000355766 CD200R1LQ6Q8B3 271 aa6.12□□□□□ -1.43
VPS13A-201ENST00000355766 ZNF322Q6U7Q0 402 aaPredicted RBP6.12□□□□□ -1.43
VPS13A-201ENST00000355766 ESPNLQ6ZVH7 1005 aa6.12□□□□□ -1.43
VPS13A-201ENST00000355766 USP43Q70EL4 1123 aa6.12□□□□□ -1.43
VPS13A-201ENST00000355766 TRILQ7L0X0 811 aa6.12□□□□□ -1.43
VPS13A-201ENST00000355766 MDGA2Q7Z553 956 aa6.12□□□□□ -1.43
VPS13A-201ENST00000355766 RTTNQ86VV8 2226 aa6.12□□□□□ -1.43
VPS13A-201ENST00000355766 SLC22A16Q86VW1 577 aa6.12□□□□□ -1.43
VPS13A-201ENST00000355766 LRRC17Q8N6Y2 441 aa6.12□□□□□ -1.43
VPS13A-201ENST00000355766 OR52E2Q8NGJ4 325 aa6.12□□□□□ -1.43
VPS13A-201ENST00000355766 POC1BQ8TC44 478 aa6.12□□□□□ -1.43
VPS13A-201ENST00000355766 PHYHIPQ92561 330 aa6.12□□□□□ -1.43
VPS13A-201ENST00000355766 UFD1Q92890 307 aa6.12□□□□□ -1.43
VPS13A-201ENST00000355766 ZNF524Q96C55 264 aa6.12□□□□□ -1.43
VPS13A-201ENST00000355766 ZHX1-C8orf76Q96EF9 292 aa6.12□□□□□ -1.43
VPS13A-201ENST00000355766 OPALINQ96PE5 141 aa6.12□□□□□ -1.43
VPS13A-201ENST00000355766 TSPAN32Q96QS1 320 aa6.12□□□□□ -1.43
VPS13A-201ENST00000355766 ZNF649Q9BS31 505 aa6.12□□□□□ -1.43
VPS13A-201ENST00000355766 TTTY12Q9BZ98 90 aa6.12□□□□□ -1.43
VPS13A-201ENST00000355766 YIPF3Q9GZM5 350 aa6.12□□□□□ -1.43
VPS13A-201ENST00000355766 NELFAQ9H3P2 528 aa6.12□□□□□ -1.43
VPS13A-201ENST00000355766 CXorf56Q9H5V9 222 aa6.12□□□□□ -1.43
VPS13A-201ENST00000355766 ADGRL4Q9HBW9 690 aa6.12□□□□□ -1.43
VPS13A-201ENST00000355766 MSL2Q9HCI7 577 aa6.12□□□□□ -1.43
VPS13A-201ENST00000355766 ASB6Q9NWX5 421 aa6.12□□□□□ -1.43
VPS13A-201ENST00000355766 CCDC59Q9P031 241 aaKnown RBP6.12□□□□□ -1.43
VPS13A-201ENST00000355766 MED11Q9P086 117 aa6.12□□□□□ -1.43
VPS13A-201ENST00000355766 KLHL13Q9P2N7 655 aa6.12□□□□□ -1.43
VPS13A-201ENST00000355766 AASSQ9UDR5 926 aa6.12□□□□□ -1.43
VPS13A-201ENST00000355766 KCNG2Q9UJ96 466 aa6.12□□□□□ -1.43
VPS13A-201ENST00000355766 FBXL2Q9UKC9 423 aa6.12□□□□□ -1.43
VPS13A-201ENST00000355766 STUB1Q9UNE7 303 aa6.12□□□□□ -1.43
VPS13A-201ENST00000355766 A0A0G2JMM0 328 aa6.11□□□□□ -1.43
VPS13A-201ENST00000355766 A0A1W2PPB8 328 aa6.11□□□□□ -1.43
VPS13A-201ENST00000355766 A0A1W2PRS3 328 aa6.11□□□□□ -1.43
VPS13A-201ENST00000355766 LRRC3CA6NJW4 275 aa6.11□□□□□ -1.43
VPS13A-201ENST00000355766 KIR3DP1A8MWS1 328 aa6.11□□□□□ -1.43
VPS13A-201ENST00000355766 RNF13O43567 381 aa6.11□□□□□ -1.43
VPS13A-201ENST00000355766 GLSO94925 669 aaPredicted RBP6.11□□□□□ -1.43
VPS13A-201ENST00000355766 SLC2A10O95528 541 aa6.11□□□□□ -1.43
VPS13A-201ENST00000355766 BCL10O95999 233 aa6.11□□□□□ -1.43
VPS13A-201ENST00000355766 HLA-DPB1P04440 258 aa6.11□□□□□ -1.43
VPS13A-201ENST00000355766 HPNP05981 417 aa6.11□□□□□ -1.43
VPS13A-201ENST00000355766 GABRA1P14867 456 aa6.11□□□□□ -1.43
VPS13A-201ENST00000355766 CFL1P23528 166 aaKnown RBP6.11□□□□□ -1.43
VPS13A-201ENST00000355766 FGF9P31371 208 aaPredicted RBP6.11□□□□□ -1.43
VPS13A-201ENST00000355766 LIPAP38571 399 aa6.11□□□□□ -1.43
VPS13A-201ENST00000355766 TGM4P49221 684 aa6.11□□□□□ -1.43
VPS13A-201ENST00000355766 P2RY4P51582 365 aa6.11□□□□□ -1.43
VPS13A-201ENST00000355766 AGFG1P52594 562 aaKnown RBP6.11□□□□□ -1.43
VPS13A-201ENST00000355766 RPS7P62081 194 aaKnown RBP6.11□□□□□ -1.43
VPS13A-201ENST00000355766 ERVK-25P63136 954 aa6.11□□□□□ -1.43
VPS13A-201ENST00000355766 FOXO1Q12778 655 aa6.11□□□□□ -1.43
VPS13A-201ENST00000355766 MED22Q15528 200 aa6.11□□□□□ -1.43
VPS13A-201ENST00000355766 STK11Q15831 433 aa6.11□□□□□ -1.43
VPS13A-201ENST00000355766 BCL2A1Q16548 175 aa6.11□□□□□ -1.43
VPS13A-201ENST00000355766 ACKR1Q16570 336 aa6.11□□□□□ -1.43
VPS13A-201ENST00000355766 CDONQ4KMG0 1287 aa6.11□□□□□ -1.43
VPS13A-201ENST00000355766 MESTQ5EB52 335 aa6.11□□□□□ -1.43
VPS13A-201ENST00000355766 TEX30Q5JUR7 227 aa6.11□□□□□ -1.43
VPS13A-201ENST00000355766 LINC01590Q5TEZ4 76 aa6.11□□□□□ -1.43
VPS13A-201ENST00000355766 LEG1Q6P5S2 330 aa6.11□□□□□ -1.43
VPS13A-201ENST00000355766 TMPPEQ6ZT21 453 aa6.11□□□□□ -1.43
VPS13A-201ENST00000355766 SEM1Q6ZVN7 128 aa6.11□□□□□ -1.43
VPS13A-201ENST00000355766 RHOUQ7L0Q8 258 aa6.11□□□□□ -1.43
VPS13A-201ENST00000355766 SLC16A9Q7RTY1 509 aa6.11□□□□□ -1.43
VPS13A-201ENST00000355766 MEX3DQ86XN8 651 aaKnown RBP6.11□□□□□ -1.43
VPS13A-201ENST00000355766 FAM109AQ8N4B1 249 aa6.11□□□□□ -1.43
VPS13A-201ENST00000355766 NAXEQ8NCW5 288 aa6.11□□□□□ -1.43
VPS13A-201ENST00000355766 SDR9C7Q8NEX9 313 aa6.11□□□□□ -1.43
VPS13A-201ENST00000355766 BBS1Q8NFJ9 593 aa6.11□□□□□ -1.43
VPS13A-201ENST00000355766 OR2M7Q8NG81 312 aa6.11□□□□□ -1.43
VPS13A-201ENST00000355766 OR4K13Q8NH42 304 aa6.11□□□□□ -1.43
VPS13A-201ENST00000355766 OR6X1Q8NH79 312 aa6.11□□□□□ -1.43
VPS13A-201ENST00000355766 MOSPD2Q8NHP6 518 aa6.11□□□□□ -1.43
VPS13A-201ENST00000355766 ASB17Q8WXJ9 295 aa6.11□□□□□ -1.43
VPS13A-201ENST00000355766 SMPDL3BQ92485 455 aa6.11□□□□□ -1.43
VPS13A-201ENST00000355766 PIGTQ969N2 578 aa6.11□□□□□ -1.43
VPS13A-201ENST00000355766 SARAFQ96BY9 339 aa6.11□□□□□ -1.43
VPS13A-201ENST00000355766 KLHL15Q96M94 604 aa6.11□□□□□ -1.43
VPS13A-201ENST00000355766 MED18Q9BUE0 208 aa6.11□□□□□ -1.43
VPS13A-201ENST00000355766 ALG8Q9BVK2 526 aa6.11□□□□□ -1.43
VPS13A-201ENST00000355766 KCNN2Q9H2S1 579 aa6.11□□□□□ -1.43
VPS13A-201ENST00000355766 ZNF703Q9H7S9 590 aaPredicted RBP6.11□□□□□ -1.43
VPS13A-201ENST00000355766 PALMDQ9NP74 551 aa6.11□□□□□ -1.43
VPS13A-201ENST00000355766 TIGARQ9NQ88 270 aa6.11□□□□□ -1.43
VPS13A-201ENST00000355766 BABAM2Q9NXR7 383 aa6.11□□□□□ -1.43
VPS13A-201ENST00000355766 IL20RAQ9UHF4 553 aa6.11□□□□□ -1.43
VPS13A-201ENST00000355766 RCE1Q9Y256 329 aa6.11□□□□□ -1.43
VPS13A-201ENST00000355766 VDAC3Q9Y277 283 aa6.11□□□□□ -1.43
VPS13A-201ENST00000355766 ADAM18Q9Y3Q7 739 aa6.11□□□□□ -1.43
VPS13A-201ENST00000355766 PHF3Q92576 2039 aaKnown RBP6.11□□□□□ -1.43
VPS13A-201ENST00000355766 DAPL1A0PJW8 107 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms