RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 ANKRD61A6NGH8 418 aa16.39■□□□□ 0.21
COL18A1-202ENST00000355480 CCSO14618 274 aa16.39■□□□□ 0.21
COL18A1-202ENST00000355480 OIP5O43482 229 aa16.39■□□□□ 0.21
COL18A1-202ENST00000355480 WDR1O75083 606 aa16.39■□□□□ 0.21
COL18A1-202ENST00000355480 RAF1P04049 648 aa16.39■□□□□ 0.21
COL18A1-202ENST00000355480 EMDP50402 254 aa16.39■□□□□ 0.21
COL18A1-202ENST00000355480 ADIRFQ15847 76 aa16.39■□□□□ 0.21
COL18A1-202ENST00000355480 RTL8BQ17RB0 113 aa16.39■□□□□ 0.21
COL18A1-202ENST00000355480 LSRQ86X29 649 aaPredicted RBP16.39■□□□□ 0.21
COL18A1-202ENST00000355480 CELF2-AS1Q8N7Q2 184 aa16.39■□□□□ 0.21
COL18A1-202ENST00000355480 TAAR9Q96RI9 348 aa16.39■□□□□ 0.21
COL18A1-202ENST00000355480 TINAGL1Q9GZM7 467 aaPredicted RBP16.39■□□□□ 0.21
COL18A1-202ENST00000355480 SLC23A1Q9UHI7 598 aa16.39■□□□□ 0.21
COL18A1-202ENST00000355480 FBXO4Q9UKT5 387 aa16.39■□□□□ 0.21
COL18A1-202ENST00000355480 FAM96BQ9Y3D0 163 aa16.39■□□□□ 0.21
COL18A1-202ENST00000355480 CHST2Q9Y4C5 530 aa16.39■□□□□ 0.21
COL18A1-202ENST00000355480 CCDC187A0A096LP49 1063 aa16.38■□□□□ 0.21
COL18A1-202ENST00000355480 DIO1P49895 249 aa16.38■□□□□ 0.21
COL18A1-202ENST00000355480 FBXL6Q8N531 539 aa16.38■□□□□ 0.21
COL18A1-202ENST00000355480 SPACA5Q96QH8 159 aa16.38■□□□□ 0.21
COL18A1-202ENST00000355480 S1PR5Q9H228 398 aa16.38■□□□□ 0.21
COL18A1-202ENST00000355480 POMT2Q9UKY4 750 aa16.38■□□□□ 0.21
COL18A1-202ENST00000355480 TMEM200CA6NKL6 621 aa16.38■□□□□ 0.21
COL18A1-202ENST00000355480 B4GALT3O60512 393 aa16.38■□□□□ 0.21
COL18A1-202ENST00000355480 CPEP16870 476 aa16.38■□□□□ 0.21
COL18A1-202ENST00000355480 RFX2P48378 723 aa16.38■□□□□ 0.21
COL18A1-202ENST00000355480 RPL34P49207 117 aaKnown RBP16.38■□□□□ 0.21
COL18A1-202ENST00000355480 FABP6P51161 128 aa16.38■□□□□ 0.21
COL18A1-202ENST00000355480 SHBQ15464 509 aa16.38■□□□□ 0.21
COL18A1-202ENST00000355480 ZNF718Q3SXZ3 478 aa16.38■□□□□ 0.21
COL18A1-202ENST00000355480 ROBO4Q8WZ75 1007 aa16.38■□□□□ 0.21
COL18A1-202ENST00000355480 LRFN5Q96NI6 719 aa16.38■□□□□ 0.21
COL18A1-202ENST00000355480 NIPSNAP3BQ9BS92 247 aa16.38■□□□□ 0.21
COL18A1-202ENST00000355480 IL21Q9HBE4 155 aa16.38■□□□□ 0.21
COL18A1-202ENST00000355480 OSGIN2Q9Y236 505 aa16.38■□□□□ 0.21
COL18A1-202ENST00000355480 SPTY2D1-AS1A0A0U1RR47 76 aa16.38■□□□□ 0.21
COL18A1-202ENST00000355480 C20orf202A1L168 122 aa16.38■□□□□ 0.21
COL18A1-202ENST00000355480 ACKR3P25106 362 aa16.38■□□□□ 0.21
COL18A1-202ENST00000355480 GPR3P46089 330 aa16.38■□□□□ 0.21
COL18A1-202ENST00000355480 DBPQ10586 325 aaPredicted RBP16.38■□□□□ 0.21
COL18A1-202ENST00000355480 GFRALQ6UXV0 394 aa16.38■□□□□ 0.21
COL18A1-202ENST00000355480 OR2A14Q96R47 310 aa16.38■□□□□ 0.21
COL18A1-202ENST00000355480 LMO7DNF2Z398 122 aa16.38■□□□□ 0.21
COL18A1-202ENST00000355480 FLI1Q01543 452 aaPredicted RBP16.38■□□□□ 0.21
COL18A1-202ENST00000355480 DOC2BQ14184 412 aa16.38■□□□□ 0.21
COL18A1-202ENST00000355480 UBAC2Q8NBM4 344 aa16.38■□□□□ 0.21
COL18A1-202ENST00000355480 SLC38A9Q8NBW4 561 aa16.38■□□□□ 0.21
COL18A1-202ENST00000355480 LRRC61Q9BV99 259 aa16.38■□□□□ 0.21
COL18A1-202ENST00000355480 QPCTLQ9NXS2 382 aa16.38■□□□□ 0.21
COL18A1-202ENST00000355480 TSTD3H0UI37 97 aa16.38■□□□□ 0.21
COL18A1-202ENST00000355480 GLI4P10075 376 aa16.38■□□□□ 0.21
COL18A1-202ENST00000355480 DUSP1P28562 367 aa16.38■□□□□ 0.21
COL18A1-202ENST00000355480 SLC35A2P78381 396 aa16.38■□□□□ 0.21
COL18A1-202ENST00000355480 BTN1A1Q13410 526 aa16.38■□□□□ 0.21
COL18A1-202ENST00000355480 NUDT9Q9BW91 350 aa16.38■□□□□ 0.21
COL18A1-202ENST00000355480 UGT2A1Q9Y4X1 527 aa16.38■□□□□ 0.21
COL18A1-202ENST00000355480 A0A087WZY1 265 aa16.37■□□□□ 0.21
COL18A1-202ENST00000355480 A0A1B0GVG6 124 aa16.37■□□□□ 0.21
COL18A1-202ENST00000355480 BHLHE40O14503 412 aa16.37■□□□□ 0.21
COL18A1-202ENST00000355480 S100A11P31949 105 aa16.37■□□□□ 0.21
COL18A1-202ENST00000355480 FAM26EQ8N5C1 309 aa16.37■□□□□ 0.21
COL18A1-202ENST00000355480 OR52H1Q8NGJ2 320 aa16.37■□□□□ 0.21
COL18A1-202ENST00000355480 CBR3O75828 277 aa16.37■□□□□ 0.21
COL18A1-202ENST00000355480 B4GALT1P15291 398 aa16.37■□□□□ 0.21
COL18A1-202ENST00000355480 CSN1S1P47710 185 aa16.37■□□□□ 0.21
COL18A1-202ENST00000355480 TMEM41BQ5BJD5 291 aa16.37■□□□□ 0.21
COL18A1-202ENST00000355480 SLC51BQ86UW2 128 aa16.37■□□□□ 0.21
COL18A1-202ENST00000355480 CDC20BQ86Y33 519 aa16.37■□□□□ 0.21
COL18A1-202ENST00000355480 OR2A1Q8NGT9 310 aa16.37■□□□□ 0.21
COL18A1-202ENST00000355480 OR2G3Q8NGZ4 309 aa16.37■□□□□ 0.21
COL18A1-202ENST00000355480 MBOAT4Q96T53 435 aa16.37■□□□□ 0.21
COL18A1-202ENST00000355480 S1PR3Q99500 378 aa16.37■□□□□ 0.21
COL18A1-202ENST00000355480 ADAM19Q9H013 955 aa16.37■□□□□ 0.21
COL18A1-202ENST00000355480 TXNIPQ9H3M7 391 aa16.37■□□□□ 0.21
COL18A1-202ENST00000355480 NPAP1Q9NZP6 1156 aa16.37■□□□□ 0.21
COL18A1-202ENST00000355480 SMLR1H3BR10 107 aa16.37■□□□□ 0.21
COL18A1-202ENST00000355480 KLK10O43240 276 aa16.37■□□□□ 0.21
COL18A1-202ENST00000355480 GABRG2P18507 467 aa16.37■□□□□ 0.21
COL18A1-202ENST00000355480 RPS27P42677 84 aaKnown RBP16.37■□□□□ 0.21
COL18A1-202ENST00000355480 PCK2Q16822 640 aa16.37■□□□□ 0.21
COL18A1-202ENST00000355480 ZNF628Q5EBL2 1059 aa16.37■□□□□ 0.21
COL18A1-202ENST00000355480 TCEAL7Q9BRU2 100 aa16.37■□□□□ 0.21
COL18A1-202ENST00000355480 ST8SIA3O43173 380 aa16.37■□□□□ 0.21
COL18A1-202ENST00000355480 PXT1Q8NFP0 134 aa16.37■□□□□ 0.21
COL18A1-202ENST00000355480 SFT2D1Q8WV19 159 aa16.37■□□□□ 0.21
COL18A1-202ENST00000355480 SLC25A37Q9NYZ2 338 aa16.37■□□□□ 0.21
COL18A1-202ENST00000355480 H0Y8G0 127 aa16.37■□□□□ 0.21
COL18A1-202ENST00000355480 RHOUQ7L0Q8 258 aa16.37■□□□□ 0.21
COL18A1-202ENST00000355480 BAGE3Q86Y29 109 aa16.37■□□□□ 0.21
COL18A1-202ENST00000355480 BAGE2Q86Y30 109 aa16.37■□□□□ 0.21
COL18A1-202ENST00000355480 CORO2AQ92828 525 aa16.37■□□□□ 0.21
COL18A1-202ENST00000355480 KISS1RQ969F8 398 aaPredicted RBP16.37■□□□□ 0.21
COL18A1-202ENST00000355480 FLVCR1Q9Y5Y0 555 aa16.37■□□□□ 0.21
COL18A1-202ENST00000355480 UBE2G1P62253 170 aa16.36■□□□□ 0.21
COL18A1-202ENST00000355480 TLE1Q04724 770 aa16.36■□□□□ 0.21
COL18A1-202ENST00000355480 NLRC3Q7RTR2 1065 aa16.36■□□□□ 0.21
COL18A1-202ENST00000355480 ZDHHC23Q8IYP9 409 aa16.36■□□□□ 0.21
COL18A1-202ENST00000355480 OR11G2Q8NGC1 345 aa16.36■□□□□ 0.21
COL18A1-202ENST00000355480 SLC25A46Q96AG3 418 aa16.36■□□□□ 0.21
COL18A1-202ENST00000355480 BTF3L4Q96K17 158 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms