RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 PLET1Q6UQ28 207 aa4.89□□□□□ -1.63
CD47-201ENST00000355354 DNM1P46Q6ZS02 220 aa4.89□□□□□ -1.63
CD47-201ENST00000355354 Q6ZSR6 202 aa4.89□□□□□ -1.63
CD47-201ENST00000355354 ADGRG3Q86Y34 549 aa4.89□□□□□ -1.63
CD47-201ENST00000355354 OR2G2Q8NGZ5 317 aa4.89□□□□□ -1.63
CD47-201ENST00000355354 TMED6Q8WW62 240 aa4.89□□□□□ -1.63
CD47-201ENST00000355354 HIST1H2AHQ96KK5 128 aa4.89□□□□□ -1.63
CD47-201ENST00000355354 HIST1H2AJQ99878 128 aa4.89□□□□□ -1.63
CD47-201ENST00000355354 C19orf43Q9BQ61 176 aa4.89□□□□□ -1.63
CD47-201ENST00000355354 H2AFJQ9BTM1 129 aa4.89□□□□□ -1.63
CD47-201ENST00000355354 OR8D2Q9GZM6 311 aa4.89□□□□□ -1.63
CD47-201ENST00000355354 LYARQ9NX58 379 aaKnown RBP4.89□□□□□ -1.63
CD47-201ENST00000355354 ZNF443Q9Y2A4 671 aaPredicted RBP4.89□□□□□ -1.63
CD47-201ENST00000355354 SLC22A7Q9Y694 548 aa4.89□□□□□ -1.63
CD47-201ENST00000355354 PRSS38A1L453 326 aa4.89□□□□□ -1.63
CD47-201ENST00000355354 HMX3A6NHT5 357 aa4.89□□□□□ -1.63
CD47-201ENST00000355354 D6RAR5 112 aa4.89□□□□□ -1.63
CD47-201ENST00000355354 CATP04040 527 aaKnown RBP4.89□□□□□ -1.63
CD47-201ENST00000355354 SRMP19623 302 aa4.89□□□□□ -1.63
CD47-201ENST00000355354 SERPINB1P30740 379 aa4.89□□□□□ -1.63
CD47-201ENST00000355354 MTNR1BP49286 362 aa4.89□□□□□ -1.63
CD47-201ENST00000355354 DCDC1P59894 354 aa4.89□□□□□ -1.63
CD47-201ENST00000355354 RPL26P61254 145 aaKnown RBP4.89□□□□□ -1.63
CD47-201ENST00000355354 REEP5Q00765 189 aa4.89□□□□□ -1.63
CD47-201ENST00000355354 SKP2Q13309 424 aa4.89□□□□□ -1.63
CD47-201ENST00000355354 TAF12Q16514 161 aa4.89□□□□□ -1.63
CD47-201ENST00000355354 C2orf76Q3KRA6 126 aa4.89□□□□□ -1.63
CD47-201ENST00000355354 C3orf38Q5JPI3 329 aa4.89□□□□□ -1.63
CD47-201ENST00000355354 GLYATL3Q5SZD4 288 aa4.89□□□□□ -1.63
CD47-201ENST00000355354 PYHIN1Q6K0P9 492 aa4.89□□□□□ -1.63
CD47-201ENST00000355354 PAPD4Q6PIY7 484 aaKnown RBP4.89□□□□□ -1.63
CD47-201ENST00000355354 ZCCHC24Q8N2G6 241 aaKnown RBP4.89□□□□□ -1.63
CD47-201ENST00000355354 RPRMLQ8N4K4 120 aa4.89□□□□□ -1.63
CD47-201ENST00000355354 POMGNT2Q8NAT1 580 aa4.89□□□□□ -1.63
CD47-201ENST00000355354 AKR7LQ8NHP1 331 aa4.89□□□□□ -1.63
CD47-201ENST00000355354 CCDC74AQ96AQ1 378 aa4.89□□□□□ -1.63
CD47-201ENST00000355354 CNTD2Q9H8S5 307 aa4.89□□□□□ -1.63
CD47-201ENST00000355354 A4GALTQ9NPC4 353 aa4.89□□□□□ -1.63
CD47-201ENST00000355354 CMC2Q9NRP2 79 aa4.89□□□□□ -1.63
CD47-201ENST00000355354 HRASLS2Q9NWW9 162 aa4.89□□□□□ -1.63
CD47-201ENST00000355354 TRBV2A0A0J9YWF9 115 aa4.89□□□□□ -1.63
CD47-201ENST00000355354 TMEM129A0AVI4 362 aa4.89□□□□□ -1.63
CD47-201ENST00000355354 K7EM74 188 aa4.89□□□□□ -1.63
CD47-201ENST00000355354 FASLGP48023 281 aa4.89□□□□□ -1.63
CD47-201ENST00000355354 GDI2P50395 445 aaKnown RBP4.89□□□□□ -1.63
CD47-201ENST00000355354 BLVRAP53004 296 aa4.89□□□□□ -1.63
CD47-201ENST00000355354 FBXW4P57775 412 aa4.89□□□□□ -1.63
CD47-201ENST00000355354 OR1D5P58170 312 aa4.89□□□□□ -1.63
CD47-201ENST00000355354 YPEL5P62699 121 aa4.89□□□□□ -1.63
CD47-201ENST00000355354 ARL16Q0P5N6 197 aa4.89□□□□□ -1.63
CD47-201ENST00000355354 C3orf33Q6P1S2 294 aa4.89□□□□□ -1.63
CD47-201ENST00000355354 C19orf35Q6ZS72 473 aa4.89□□□□□ -1.63
CD47-201ENST00000355354 FOXRED2Q8IWF2 684 aa4.89□□□□□ -1.63
CD47-201ENST00000355354 KIR3DL3Q8N743 410 aa4.89□□□□□ -1.63
CD47-201ENST00000355354 PRRC1Q96M27 445 aa4.89□□□□□ -1.63
CD47-201ENST00000355354 VSIRQ9H7M9 311 aa4.89□□□□□ -1.63
CD47-201ENST00000355354 A0A1B0GW55 424 aa4.89□□□□□ -1.63
CD47-201ENST00000355354 P2RY10O00398 339 aa4.89□□□□□ -1.63
CD47-201ENST00000355354 HMGB3O15347 200 aaKnown RBP4.89□□□□□ -1.63
CD47-201ENST00000355354 XRCC2O43543 280 aa4.89□□□□□ -1.63
CD47-201ENST00000355354 NOL3O60936 208 aaKnown RBP4.89□□□□□ -1.63
CD47-201ENST00000355354 SRSF10O75494 262 aaKnown RBP4.89□□□□□ -1.63
CD47-201ENST00000355354 ADAP00813 363 aa4.89□□□□□ -1.63
CD47-201ENST00000355354 NGFP01138 241 aa4.89□□□□□ -1.63
CD47-201ENST00000355354 DUX4L2P0CJ85 424 aa4.89□□□□□ -1.63
CD47-201ENST00000355354 DUX4L3P0CJ86 424 aa4.89□□□□□ -1.63
CD47-201ENST00000355354 DUX4L4P0CJ87 422 aa4.89□□□□□ -1.63
CD47-201ENST00000355354 DUX4L5P0CJ88 424 aa4.89□□□□□ -1.63
CD47-201ENST00000355354 DUX4L6P0CJ89 424 aa4.89□□□□□ -1.63
CD47-201ENST00000355354 DUX4L7P0CJ90 424 aa4.89□□□□□ -1.63
CD47-201ENST00000355354 MPGP29372 298 aa4.89□□□□□ -1.63
CD47-201ENST00000355354 SNTB2Q13425 540 aaKnown RBP4.89□□□□□ -1.63
CD47-201ENST00000355354 ZNF324BQ6AW86 544 aaPredicted RBP4.89□□□□□ -1.63
CD47-201ENST00000355354 BHLHB9Q6PI77 547 aa4.89□□□□□ -1.63
CD47-201ENST00000355354 DUX4L9Q6RFH8 374 aaPredicted RBP4.89□□□□□ -1.63
CD47-201ENST00000355354 IGFL2Q6UWQ7 119 aa4.89□□□□□ -1.63
CD47-201ENST00000355354 MINDY2Q8NBR6 621 aa4.89□□□□□ -1.63
CD47-201ENST00000355354 GALNT11Q8NCW6 608 aa4.89□□□□□ -1.63
CD47-201ENST00000355354 OR56B1Q8NGI3 324 aa4.89□□□□□ -1.63
CD47-201ENST00000355354 NRBF2Q96F24 287 aa4.89□□□□□ -1.63
CD47-201ENST00000355354 ASCL2Q99929 193 aa4.89□□□□□ -1.63
CD47-201ENST00000355354 AIFM2Q9BRQ8 373 aa4.89□□□□□ -1.63
CD47-201ENST00000355354 DDA1Q9BW61 102 aa4.89□□□□□ -1.63
CD47-201ENST00000355354 Q9H521 79 aa4.89□□□□□ -1.63
CD47-201ENST00000355354 DUX4Q9UBX2 424 aa4.89□□□□□ -1.63
CD47-201ENST00000355354 GNG8Q9UK08 70 aa4.89□□□□□ -1.63
CD47-201ENST00000355354 MKL2Q9ULH7 1088 aa4.89□□□□□ -1.63
CD47-201ENST00000355354 IGKV3-11P04433 115 aa4.88□□□□□ -1.63
CD47-201ENST00000355354 EDN3P14138 238 aa4.88□□□□□ -1.63
CD47-201ENST00000355354 GABRA1P14867 456 aa4.88□□□□□ -1.63
CD47-201ENST00000355354 RUNX1Q01196 453 aa4.88□□□□□ -1.63
CD47-201ENST00000355354 GNA13Q14344 377 aa4.88□□□□□ -1.63
CD47-201ENST00000355354 OCLNQ16625 522 aa4.88□□□□□ -1.63
CD47-201ENST00000355354 ZNF57Q68EA5 555 aaPredicted RBP4.88□□□□□ -1.63
CD47-201ENST00000355354 Q6ZR03 302 aa4.88□□□□□ -1.63
CD47-201ENST00000355354 CXXC5Q7LFL8 322 aaKnown RBP4.88□□□□□ -1.63
CD47-201ENST00000355354 MOB3BQ86TA1 216 aa4.88□□□□□ -1.63
CD47-201ENST00000355354 NRSN1Q8IZ57 195 aa4.88□□□□□ -1.63
CD47-201ENST00000355354 OR5AS1Q8N127 324 aa4.88□□□□□ -1.63
CD47-201ENST00000355354 MTERF3Q96E29 417 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms