RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 UBL3O95164 117 aa15.16■□□□□ 0.02
VPS13B-201ENST00000355155 APOC1P02654 83 aa15.16■□□□□ 0.02
VPS13B-201ENST00000355155 CD2P06729 351 aa15.16■□□□□ 0.02
VPS13B-201ENST00000355155 MAGEB1P43366 347 aa15.16■□□□□ 0.02
VPS13B-201ENST00000355155 PITPNBP48739 271 aa15.16■□□□□ 0.02
VPS13B-201ENST00000355155 C1orf100Q5SVJ3 147 aa15.16■□□□□ 0.02
VPS13B-201ENST00000355155 LINGO2Q7L985 606 aa15.16■□□□□ 0.02
VPS13B-201ENST00000355155 ZSCAN2Q7Z7L9 614 aaPredicted RBP15.16■□□□□ 0.02
VPS13B-201ENST00000355155 ZNF275Q9NSD4 429 aaPredicted RBP15.16■□□□□ 0.02
VPS13B-201ENST00000355155 PARPBPQ9NWS1 579 aa15.16■□□□□ 0.02
VPS13B-201ENST00000355155 STEAP1Q9UHE8 339 aa15.16■□□□□ 0.02
VPS13B-201ENST00000355155 KCNMB2Q9Y691 235 aa15.16■□□□□ 0.02
VPS13B-201ENST00000355155 A0A0U1RQV5 110 aa15.15■□□□□ 0.02
VPS13B-201ENST00000355155 FAM166BA8MTA8 275 aa15.15■□□□□ 0.02
VPS13B-201ENST00000355155 SULT1B1O43704 296 aa15.15■□□□□ 0.02
VPS13B-201ENST00000355155 SYNGR4O95473 234 aa15.15■□□□□ 0.02
VPS13B-201ENST00000355155 CRYGSP22914 178 aa15.15■□□□□ 0.02
VPS13B-201ENST00000355155 DDOSTP39656 456 aa15.15■□□□□ 0.02
VPS13B-201ENST00000355155 MMP15P51511 669 aa15.15■□□□□ 0.02
VPS13B-201ENST00000355155 ECH1Q13011 328 aa15.15■□□□□ 0.02
VPS13B-201ENST00000355155 GDPD3Q7L5L3 318 aa15.15■□□□□ 0.02
VPS13B-201ENST00000355155 NKAIN3Q8N8D7 197 aa15.15■□□□□ 0.02
VPS13B-201ENST00000355155 SAMD12Q8N8I0 201 aa15.15■□□□□ 0.02
VPS13B-201ENST00000355155 POC5Q8NA72 575 aa15.15■□□□□ 0.02
VPS13B-201ENST00000355155 PRDM14Q9GZV8 571 aa15.15■□□□□ 0.02
VPS13B-201ENST00000355155 GPR35Q9HC97 309 aa15.15■□□□□ 0.02
VPS13B-201ENST00000355155 MCTS1Q9ULC4 181 aaKnown RBP15.15■□□□□ 0.02
VPS13B-201ENST00000355155 MED13Q9UHV7 2174 aa15.15■□□□□ 0.02
VPS13B-201ENST00000355155 TRAV17A0A0B4J275 112 aa15.15■□□□□ 0.02
VPS13B-201ENST00000355155 SLC17A2O00624 439 aa15.15■□□□□ 0.02
VPS13B-201ENST00000355155 ALX3O95076 343 aa15.15■□□□□ 0.02
VPS13B-201ENST00000355155 TALDO1P37837 337 aa15.15■□□□□ 0.02
VPS13B-201ENST00000355155 GUCA1AP43080 201 aaPredicted RBP15.15■□□□□ 0.02
VPS13B-201ENST00000355155 P2RY14Q15391 338 aa15.15■□□□□ 0.02
VPS13B-201ENST00000355155 ELFN2Q5R3F8 820 aa15.15■□□□□ 0.02
VPS13B-201ENST00000355155 TRIM63Q969Q1 353 aa15.15■□□□□ 0.02
VPS13B-201ENST00000355155 PPP1R14AQ96A00 147 aa15.15■□□□□ 0.02
VPS13B-201ENST00000355155 SLC25A28Q96A46 364 aa15.15■□□□□ 0.02
VPS13B-201ENST00000355155 SLC25A38Q96DW6 304 aa15.15■□□□□ 0.02
VPS13B-201ENST00000355155 SLC25A18Q9H1K4 315 aa15.15■□□□□ 0.02
VPS13B-201ENST00000355155 PLEKHA1Q9HB21 404 aa15.15■□□□□ 0.02
VPS13B-201ENST00000355155 PLSCR2Q9NRY7 297 aa15.15■□□□□ 0.02
VPS13B-201ENST00000355155 OR5V1Q9UGF6 321 aa15.15■□□□□ 0.02
VPS13B-201ENST00000355155 A0A1W2PQ09 198 aa15.14■□□□□ 0.01
VPS13B-201ENST00000355155 SNRPBP14678 240 aaKnown RBP15.14■□□□□ 0.01
VPS13B-201ENST00000355155 RANBP1P43487 201 aa15.14■□□□□ 0.01
VPS13B-201ENST00000355155 CAPZA1P52907 286 aa15.14■□□□□ 0.01
VPS13B-201ENST00000355155 PITPNAQ00169 270 aa15.14■□□□□ 0.01
VPS13B-201ENST00000355155 RAB35Q15286 201 aa15.14■□□□□ 0.01
VPS13B-201ENST00000355155 LGALS14Q8TCE9 139 aa15.14■□□□□ 0.01
VPS13B-201ENST00000355155 TSEN15Q8WW01 171 aaKnown RBP15.14■□□□□ 0.01
VPS13B-201ENST00000355155 ITFG2Q969R8 447 aa15.14■□□□□ 0.01
VPS13B-201ENST00000355155 FOXRED1Q96CU9 486 aaPredicted RBP15.14■□□□□ 0.01
VPS13B-201ENST00000355155 CENPMQ9NSP4 180 aa15.14■□□□□ 0.01
VPS13B-201ENST00000355155 RER1O15258 196 aa15.14■□□□□ 0.01
VPS13B-201ENST00000355155 PAHP00439 452 aa15.14■□□□□ 0.01
VPS13B-201ENST00000355155 SOX2P48431 317 aa15.14■□□□□ 0.01
VPS13B-201ENST00000355155 RSPO1Q2MKA7 263 aaPredicted RBP15.14■□□□□ 0.01
VPS13B-201ENST00000355155 PYDC2Q56P42 97 aa15.14■□□□□ 0.01
VPS13B-201ENST00000355155 RNFT1Q5M7Z0 435 aa15.14■□□□□ 0.01
VPS13B-201ENST00000355155 PTX4Q96A99 478 aa15.14■□□□□ 0.01
VPS13B-201ENST00000355155 C10orf35Q96D05 121 aa15.14■□□□□ 0.01
VPS13B-201ENST00000355155 HDHD2Q9H0R4 259 aa15.14■□□□□ 0.01
VPS13B-201ENST00000355155 TRGV5A0A0B4J1U4 118 aa15.13■□□□□ 0.01
VPS13B-201ENST00000355155 FUOMA2VDF0 154 aa15.13■□□□□ 0.01
VPS13B-201ENST00000355155 OR6C6A6NF89 314 aa15.13■□□□□ 0.01
VPS13B-201ENST00000355155 FAM25AB3EWG3 89 aa15.13■□□□□ 0.01
VPS13B-201ENST00000355155 FAM25CB3EWG5 89 aa15.13■□□□□ 0.01
VPS13B-201ENST00000355155 FAM25GB3EWG6 89 aa15.13■□□□□ 0.01
VPS13B-201ENST00000355155 MAGEB3O15480 346 aa15.13■□□□□ 0.01
VPS13B-201ENST00000355155 EFSO43281 561 aa15.13■□□□□ 0.01
VPS13B-201ENST00000355155 RFX2P48378 723 aa15.13■□□□□ 0.01
VPS13B-201ENST00000355155 BCAP31P51572 246 aa15.13■□□□□ 0.01
VPS13B-201ENST00000355155 SPATC1Q76KD6 591 aa15.13■□□□□ 0.01
VPS13B-201ENST00000355155 UBQLNLQ8IYU4 475 aa15.13■□□□□ 0.01
VPS13B-201ENST00000355155 Q8N402 240 aa15.13■□□□□ 0.01
VPS13B-201ENST00000355155 C15orf40Q8WUR7 153 aa15.13■□□□□ 0.01
VPS13B-201ENST00000355155 SLCO5A1Q9H2Y9 848 aa15.13■□□□□ 0.01
VPS13B-201ENST00000355155 BRD7Q9NPI1 651 aa15.13■□□□□ 0.01
VPS13B-201ENST00000355155 C14orf119Q9NWQ9 140 aa15.13■□□□□ 0.01
VPS13B-201ENST00000355155 POLR1DQ9Y2S0 133 aa15.13■□□□□ 0.01
VPS13B-201ENST00000355155 LIPGQ9Y5X9 500 aa15.13■□□□□ 0.01
VPS13B-201ENST00000355155 SYNGR3O43761 229 aa15.13■□□□□ 0.01
VPS13B-201ENST00000355155 FAM157BP0CG42 384 aa15.13■□□□□ 0.01
VPS13B-201ENST00000355155 OR8H2Q8N162 312 aa15.13■□□□□ 0.01
VPS13B-201ENST00000355155 ABHD3Q8WU67 409 aa15.13■□□□□ 0.01
VPS13B-201ENST00000355155 ORAI1Q96D31 301 aa15.13■□□□□ 0.01
VPS13B-201ENST00000355155 HAVCR1Q96D42 359 aa15.13■□□□□ 0.01
VPS13B-201ENST00000355155 FBXO17Q96EF6 278 aa15.13■□□□□ 0.01
VPS13B-201ENST00000355155 SPRR3Q9UBC9 169 aa15.13■□□□□ 0.01
VPS13B-201ENST00000355155 DHRS7CA6NNS2 312 aa15.12■□□□□ 0.01
VPS13B-201ENST00000355155 LDLRAD4O15165 306 aa15.12■□□□□ 0.01
VPS13B-201ENST00000355155 PLA2G10O15496 165 aa15.12■□□□□ 0.01
VPS13B-201ENST00000355155 HSD11B1P28845 292 aa15.12■□□□□ 0.01
VPS13B-201ENST00000355155 IL18Q14116 193 aa15.12■□□□□ 0.01
VPS13B-201ENST00000355155 SGCAQ16586 387 aa15.12■□□□□ 0.01
VPS13B-201ENST00000355155 OR8B12Q8NGG6 310 aa15.12■□□□□ 0.01
VPS13B-201ENST00000355155 OR13C3Q8NGS6 347 aa15.12■□□□□ 0.01
VPS13B-201ENST00000355155 LIN7BQ9HAP6 207 aa15.12■□□□□ 0.01
VPS13B-201ENST00000355155 CKLFQ9UBR5 152 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms