RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 FNDC11Q9BVV2 318 aa13.33□□□□□ -0.28
PDGFA-201ENST00000354513 CD300AQ9UGN4 299 aa13.33□□□□□ -0.28
PDGFA-201ENST00000354513 PCDHGB1Q9Y5G3 927 aa13.33□□□□□ -0.28
PDGFA-201ENST00000354513 SOX21Q9Y651 276 aaPredicted RBP13.33□□□□□ -0.28
PDGFA-201ENST00000354513 GSC2O15499 205 aa13.32□□□□□ -0.28
PDGFA-201ENST00000354513 KCNAB3O43448 404 aa13.32□□□□□ -0.28
PDGFA-201ENST00000354513 GSTM3P21266 225 aa13.32□□□□□ -0.28
PDGFA-201ENST00000354513 DBPQ10586 325 aaPredicted RBP13.32□□□□□ -0.28
PDGFA-201ENST00000354513 AQP6Q13520 282 aa13.32□□□□□ -0.28
PDGFA-201ENST00000354513 KRR1Q13601 381 aaKnown RBP13.32□□□□□ -0.28
PDGFA-201ENST00000354513 ZBED5Q49AG3 693 aa13.32□□□□□ -0.28
PDGFA-201ENST00000354513 IFI44LQ53G44 452 aa13.32□□□□□ -0.28
PDGFA-201ENST00000354513 ZNF730Q6ZMV8 503 aa13.32□□□□□ -0.28
PDGFA-201ENST00000354513 PTCHD4Q6ZW05 846 aa13.32□□□□□ -0.28
PDGFA-201ENST00000354513 RNF113BQ8IZP6 322 aaKnown RBP13.32□□□□□ -0.28
PDGFA-201ENST00000354513 SGMS2Q8NHU3 365 aa13.32□□□□□ -0.28
PDGFA-201ENST00000354513 MCUR1Q96AQ8 359 aa13.32□□□□□ -0.28
PDGFA-201ENST00000354513 DACT3Q96B18 629 aaPredicted RBP13.32□□□□□ -0.28
PDGFA-201ENST00000354513 HAVCR1Q96D42 359 aa13.32□□□□□ -0.28
PDGFA-201ENST00000354513 FAM46AQ96IP4 442 aaKnown RBP13.32□□□□□ -0.28
PDGFA-201ENST00000354513 HSH2DQ96JZ2 352 aa13.32□□□□□ -0.28
PDGFA-201ENST00000354513 CLPTM1LQ96KA5 538 aa13.32□□□□□ -0.28
PDGFA-201ENST00000354513 OR2V2Q96R30 315 aa13.32□□□□□ -0.28
PDGFA-201ENST00000354513 CADM1Q9BY67 442 aaKnown RBP13.32□□□□□ -0.28
PDGFA-201ENST00000354513 ASH2LQ9UBL3 628 aa13.32□□□□□ -0.28
PDGFA-201ENST00000354513 IL19Q9UHD0 177 aa13.32□□□□□ -0.28
PDGFA-201ENST00000354513 NUP50Q9UKX7 468 aa13.32□□□□□ -0.28
PDGFA-201ENST00000354513 SIGLEC7Q9Y286 467 aa13.32□□□□□ -0.28
PDGFA-201ENST00000354513 MGAM2Q2M2H8 2515 aa13.31□□□□□ -0.28
PDGFA-201ENST00000354513 CEACAM18A8MTB9 384 aa13.31□□□□□ -0.28
PDGFA-201ENST00000354513 TMEM178BH3BS89 294 aa13.31□□□□□ -0.28
PDGFA-201ENST00000354513 CXCR6O00574 342 aa13.31□□□□□ -0.28
PDGFA-201ENST00000354513 MLNRO43193 412 aa13.31□□□□□ -0.28
PDGFA-201ENST00000354513 PTP4A3O75365 173 aa13.31□□□□□ -0.28
PDGFA-201ENST00000354513 ZNF682O95780 498 aa13.31□□□□□ -0.28
PDGFA-201ENST00000354513 GPANK1O95872 356 aa13.31□□□□□ -0.28
PDGFA-201ENST00000354513 MSX2P35548 267 aaPredicted RBP13.31□□□□□ -0.28
PDGFA-201ENST00000354513 HLXQ14774 488 aaPredicted RBP13.31□□□□□ -0.28
PDGFA-201ENST00000354513 ARMCX4Q5H9R4 360 aa13.31□□□□□ -0.28
PDGFA-201ENST00000354513 ZER1Q7Z7L7 766 aa13.31□□□□□ -0.28
PDGFA-201ENST00000354513 OR5AS1Q8N127 324 aa13.31□□□□□ -0.28
PDGFA-201ENST00000354513 SPICQ8N5J4 248 aa13.31□□□□□ -0.28
PDGFA-201ENST00000354513 ZNF420Q8TAQ5 688 aaPredicted RBP13.31□□□□□ -0.28
PDGFA-201ENST00000354513 SLC7A13Q8TCU3 470 aa13.31□□□□□ -0.28
PDGFA-201ENST00000354513 LZICQ8WZA0 190 aa13.31□□□□□ -0.28
PDGFA-201ENST00000354513 TAF15Q92804 592 aaKnown RBP eCLIP13.31□□□□□ -0.28
PDGFA-201ENST00000354513 GPX7Q96SL4 187 aaPredicted RBP13.31□□□□□ -0.28
PDGFA-201ENST00000354513 ZNF747Q9BV97 191 aa13.31□□□□□ -0.28
PDGFA-201ENST00000354513 SYT4Q9H2B2 425 aa13.31□□□□□ -0.28
PDGFA-201ENST00000354513 NTN4Q9HB63 628 aa13.31□□□□□ -0.28
PDGFA-201ENST00000354513 GCM1Q9NP62 436 aa13.31□□□□□ -0.28
PDGFA-201ENST00000354513 PLEK2Q9NYT0 353 aa13.31□□□□□ -0.28
PDGFA-201ENST00000354513 VSX1Q9NZR4 365 aaPredicted RBP13.31□□□□□ -0.28
PDGFA-201ENST00000354513 GRHPRQ9UBQ7 328 aa13.31□□□□□ -0.28
PDGFA-201ENST00000354513 COA3Q9Y2R0 106 aaPredicted RBP13.31□□□□□ -0.28
PDGFA-201ENST00000354513 AUP1Q9Y679 476 aa13.31□□□□□ -0.28
PDGFA-201ENST00000354513 H0YL77 283 aa13.3□□□□□ -0.28
PDGFA-201ENST00000354513 DCTN6O00399 190 aa13.3□□□□□ -0.28
PDGFA-201ENST00000354513 TMPRSS2O15393 492 aa13.3□□□□□ -0.28
PDGFA-201ENST00000354513 AHCYL1O43865 530 aa13.3□□□□□ -0.28
PDGFA-201ENST00000354513 GMNNO75496 209 aa13.3□□□□□ -0.28
PDGFA-201ENST00000354513 IGHV4-38-2P0DP08 117 aa13.3□□□□□ -0.28
PDGFA-201ENST00000354513 NCK1P16333 377 aa13.3□□□□□ -0.28
PDGFA-201ENST00000354513 TNFRSF1AP19438 455 aa13.3□□□□□ -0.28
PDGFA-201ENST00000354513 TUBG1P23258 451 aa13.3□□□□□ -0.28
PDGFA-201ENST00000354513 FPR2P25090 351 aa13.3□□□□□ -0.28
PDGFA-201ENST00000354513 CD80P33681 288 aa13.3□□□□□ -0.28
PDGFA-201ENST00000354513 RPL4P36578 427 aaKnown RBP13.3□□□□□ -0.28
PDGFA-201ENST00000354513 GUCA1AP43080 201 aaPredicted RBP13.3□□□□□ -0.28
PDGFA-201ENST00000354513 OMPP47874 163 aa13.3□□□□□ -0.28
PDGFA-201ENST00000354513 HIST1H3AP68431 136 aa13.3□□□□□ -0.28
PDGFA-201ENST00000354513 PAX8Q06710 450 aa13.3□□□□□ -0.28
PDGFA-201ENST00000354513 HIST2H3PS2Q5TEC6 136 aa13.3□□□□□ -0.28
PDGFA-201ENST00000354513 C1orf94Q6P1W5 598 aa13.3□□□□□ -0.28
PDGFA-201ENST00000354513 ARL9Q6T311 187 aa13.3□□□□□ -0.28
PDGFA-201ENST00000354513 HIST2H3AQ71DI3 136 aa13.3□□□□□ -0.28
PDGFA-201ENST00000354513 ASRGL1Q7L266 308 aa13.3□□□□□ -0.28
PDGFA-201ENST00000354513 KLHL36Q8N4N3 616 aa13.3□□□□□ -0.28
PDGFA-201ENST00000354513 OR10AD1Q8NGE0 317 aa13.3□□□□□ -0.28
PDGFA-201ENST00000354513 OR1F12Q8NHA8 337 aa13.3□□□□□ -0.28
PDGFA-201ENST00000354513 MEGF10Q96KG7 1140 aa13.3□□□□□ -0.28
PDGFA-201ENST00000354513 FUZQ9BT04 418 aa13.3□□□□□ -0.28
PDGFA-201ENST00000354513 NMNAT1Q9HAN9 279 aaPredicted RBP13.3□□□□□ -0.28
PDGFA-201ENST00000354513 NRIP3Q9NQ35 241 aa13.3□□□□□ -0.28
PDGFA-201ENST00000354513 TUBG2Q9NRH3 451 aa13.3□□□□□ -0.28
PDGFA-201ENST00000354513 DDX28Q9NUL7 540 aaKnown RBP13.3□□□□□ -0.28
PDGFA-201ENST00000354513 PTTG3PQ9NZH4 202 aa13.3□□□□□ -0.28
PDGFA-201ENST00000354513 IL20RAQ9UHF4 553 aa13.3□□□□□ -0.28
PDGFA-201ENST00000354513 PPP1R3CQ9UQK1 317 aa13.3□□□□□ -0.28
PDGFA-201ENST00000354513 LHFPL6Q9Y693 200 aa13.3□□□□□ -0.28
PDGFA-201ENST00000354513 ENPP4Q9Y6X5 453 aa13.3□□□□□ -0.28
PDGFA-201ENST00000354513 A0A1B0GWJ7 208 aa13.29□□□□□ -0.28
PDGFA-201ENST00000354513 RER1O15258 196 aa13.29□□□□□ -0.28
PDGFA-201ENST00000354513 SLC16A7O60669 478 aa13.29□□□□□ -0.28
PDGFA-201ENST00000354513 SERPINA1P01009 418 aa13.29□□□□□ -0.28
PDGFA-201ENST00000354513 WNT2P09544 360 aa13.29□□□□□ -0.28
PDGFA-201ENST00000354513 RAC2P15153 192 aa13.29□□□□□ -0.28
PDGFA-201ENST00000354513 TNFSF4P23510 183 aa13.29□□□□□ -0.28
PDGFA-201ENST00000354513 PRTN3P24158 256 aa13.29□□□□□ -0.28
PDGFA-201ENST00000354513 SDHAP31040 664 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms