RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 CLDN16Q9Y5I7 305 aa4.61□□□□□ -1.67
SKP1-202ENST00000353411 ARL2-SNX15V9GYD0 113 aa4.61□□□□□ -1.67
SKP1-202ENST00000353411 A0A1W2PPE2 198 aa4.61□□□□□ -1.67
SKP1-202ENST00000353411 AQP7P3A6NL99 342 aa4.61□□□□□ -1.67
SKP1-202ENST00000353411 KDM4EB2RXH2 506 aaPredicted RBP4.61□□□□□ -1.67
SKP1-202ENST00000353411 AADACP22760 399 aa4.61□□□□□ -1.67
SKP1-202ENST00000353411 IL12BP29460 328 aa4.61□□□□□ -1.67
SKP1-202ENST00000353411 CORO1AP31146 461 aaKnown RBP4.61□□□□□ -1.67
SKP1-202ENST00000353411 CDC34P49427 236 aaPredicted RBP4.61□□□□□ -1.67
SKP1-202ENST00000353411 TRA2BP62995 288 aaKnown RBP4.61□□□□□ -1.67
SKP1-202ENST00000353411 C18orf21Q32NC0 220 aaPredicted RBP4.61□□□□□ -1.67
SKP1-202ENST00000353411 Q5PR19 223 aa4.61□□□□□ -1.67
SKP1-202ENST00000353411 C6orf15Q6UXA7 325 aaPredicted RBP4.61□□□□□ -1.67
SKP1-202ENST00000353411 MEX3BQ6ZN04 569 aaKnown RBP4.61□□□□□ -1.67
SKP1-202ENST00000353411 C1orf122Q6ZSJ8 110 aa4.61□□□□□ -1.67
SKP1-202ENST00000353411 TPRG1Q6ZUI0 275 aa4.61□□□□□ -1.67
SKP1-202ENST00000353411 MS4A4EQ96PG1 132 aa4.61□□□□□ -1.67
SKP1-202ENST00000353411 CHST8Q9H2A9 424 aa4.61□□□□□ -1.67
SKP1-202ENST00000353411 SEMA6CQ9H3T2 930 aa4.61□□□□□ -1.67
SKP1-202ENST00000353411 OSGIN2Q9Y236 505 aa4.61□□□□□ -1.67
SKP1-202ENST00000353411 ZNF337Q9Y3M9 751 aa4.61□□□□□ -1.67
SKP1-202ENST00000353411 CASP8AP2Q9UKL3 1982 aa4.61□□□□□ -1.67
SKP1-202ENST00000353411 SLC22A20A6NK97 555 aa4.61□□□□□ -1.67
SKP1-202ENST00000353411 ICOSLGO75144 302 aa4.61□□□□□ -1.67
SKP1-202ENST00000353411 SBK3P0C264 359 aa4.61□□□□□ -1.67
SKP1-202ENST00000353411 TAF10Q12962 218 aa4.61□□□□□ -1.67
SKP1-202ENST00000353411 NKG7Q16617 165 aa4.61□□□□□ -1.67
SKP1-202ENST00000353411 ZFP62Q8NB50 900 aaPredicted RBP4.61□□□□□ -1.67
SKP1-202ENST00000353411 OR4K14Q8NGD5 310 aa4.61□□□□□ -1.67
SKP1-202ENST00000353411 THOC3Q96J01 351 aaKnown RBP4.61□□□□□ -1.67
SKP1-202ENST00000353411 TBX15Q96SF7 602 aa4.61□□□□□ -1.67
SKP1-202ENST00000353411 ADAT1Q9BUB4 502 aaKnown RBP4.61□□□□□ -1.67
SKP1-202ENST00000353411 SERTAD4Q9NUC0 356 aa4.61□□□□□ -1.67
SKP1-202ENST00000353411 EP300Q09472 2414 aaPredicted RBP4.61□□□□□ -1.67
SKP1-202ENST00000353411 HPXP02790 462 aa4.61□□□□□ -1.67
SKP1-202ENST00000353411 MGST1P10620 155 aaKnown RBP4.61□□□□□ -1.67
SKP1-202ENST00000353411 CRYBB1P53674 252 aaPredicted RBP4.61□□□□□ -1.67
SKP1-202ENST00000353411 SLC25A30Q5SVS4 291 aa4.61□□□□□ -1.67
SKP1-202ENST00000353411 ZNF787Q6DD87 383 aa4.61□□□□□ -1.67
SKP1-202ENST00000353411 OGFOD3Q6PK18 319 aa4.61□□□□□ -1.67
SKP1-202ENST00000353411 BRICD5Q6PL45 260 aa4.61□□□□□ -1.67
SKP1-202ENST00000353411 C12orf54Q6X4T0 127 aa4.61□□□□□ -1.67
SKP1-202ENST00000353411 LANCL3Q6ZV70 420 aa4.61□□□□□ -1.67
SKP1-202ENST00000353411 STARD4Q96DR4 205 aa4.61□□□□□ -1.67
SKP1-202ENST00000353411 EGLN2Q96KS0 407 aa4.61□□□□□ -1.67
SKP1-202ENST00000353411 MRPL37Q9BZE1 423 aaKnown RBP4.61□□□□□ -1.67
SKP1-202ENST00000353411 SELENOIQ9C0D9 397 aa4.61□□□□□ -1.67
SKP1-202ENST00000353411 GPR55Q9Y2T6 319 aaPredicted RBP4.61□□□□□ -1.67
SKP1-202ENST00000353411 TBC1D3KA0A087X1G2 549 aa4.61□□□□□ -1.67
SKP1-202ENST00000353411 DUXBA0A1W2PPF3 345 aa4.61□□□□□ -1.67
SKP1-202ENST00000353411 TBC1D3BA6NDS4 549 aa4.61□□□□□ -1.67
SKP1-202ENST00000353411 TBC1D3FA6NER0 549 aaPredicted RBP4.61□□□□□ -1.67
SKP1-202ENST00000353411 SOCS6O14544 535 aa4.61□□□□□ -1.67
SKP1-202ENST00000353411 GLSO94925 669 aaPredicted RBP4.61□□□□□ -1.67
SKP1-202ENST00000353411 SEMG1P04279 462 aa4.61□□□□□ -1.67
SKP1-202ENST00000353411 FBXO45P0C2W1 286 aa4.61□□□□□ -1.67
SKP1-202ENST00000353411 MUC1P15941 1255 aaPredicted RBP4.61□□□□□ -1.67
SKP1-202ENST00000353411 HNRNPA2B1P22626 353 aaKnown RBP4.61□□□□□ -1.67
SKP1-202ENST00000353411 OMGP23515 440 aa4.61□□□□□ -1.67
SKP1-202ENST00000353411 GPX4P36969 197 aaPredicted RBP4.61□□□□□ -1.67
SKP1-202ENST00000353411 ELOBQ15370 118 aa4.61□□□□□ -1.67
SKP1-202ENST00000353411 TBC1D3GQ6DHY5 549 aa4.61□□□□□ -1.67
SKP1-202ENST00000353411 NXPE4Q6UWF7 544 aa4.61□□□□□ -1.67
SKP1-202ENST00000353411 LHFPL2Q6ZUX7 228 aa4.61□□□□□ -1.67
SKP1-202ENST00000353411 ESPNLQ6ZVH7 1005 aa4.61□□□□□ -1.67
SKP1-202ENST00000353411 LRRC25Q8N386 305 aaPredicted RBP4.61□□□□□ -1.67
SKP1-202ENST00000353411 RAB33BQ9H082 229 aa4.61□□□□□ -1.67
SKP1-202ENST00000353411 LHX6Q9UPM6 363 aa4.61□□□□□ -1.67
SKP1-202ENST00000353411 PAM16Q9Y3D7 125 aa4.61□□□□□ -1.67
SKP1-202ENST00000353411 NHSQ6T4R5 1651 aa4.61□□□□□ -1.67
SKP1-202ENST00000353411 TGIF2-C20orf24A0A0A6YYL0 155 aa4.61□□□□□ -1.67
SKP1-202ENST00000353411 CD300LBA8K4G0 201 aa4.61□□□□□ -1.67
SKP1-202ENST00000353411 H0YIV9 168 aa4.61□□□□□ -1.67
SKP1-202ENST00000353411 FOXE1O00358 373 aaPredicted RBP4.61□□□□□ -1.67
SKP1-202ENST00000353411 FXYD4P59646 89 aa4.61□□□□□ -1.67
SKP1-202ENST00000353411 FOXK2Q01167 660 aa4.61□□□□□ -1.67
SKP1-202ENST00000353411 TMEM241Q24JQ0 296 aa4.61□□□□□ -1.67
SKP1-202ENST00000353411 COX19Q49B96 90 aa4.61□□□□□ -1.67
SKP1-202ENST00000353411 FNDC3BQ53EP0 1204 aaKnown RBP4.61□□□□□ -1.67
SKP1-202ENST00000353411 C2orf27AQ580R0 203 aa4.61□□□□□ -1.67
SKP1-202ENST00000353411 AMZ2Q86W34 360 aa4.61□□□□□ -1.67
SKP1-202ENST00000353411 DTWD2Q8NBA8 298 aa4.61□□□□□ -1.67
SKP1-202ENST00000353411 OR1P1Q8NH06 330 aa4.61□□□□□ -1.67
SKP1-202ENST00000353411 ZNF296Q8WUU4 475 aaPredicted RBP4.61□□□□□ -1.67
SKP1-202ENST00000353411 LCN9Q8WX39 176 aa4.61□□□□□ -1.67
SKP1-202ENST00000353411 GSX1Q9H4S2 264 aaPredicted RBP4.61□□□□□ -1.67
SKP1-202ENST00000353411 DNAJC4Q9NNZ3 241 aa4.61□□□□□ -1.67
SKP1-202ENST00000353411 SMIM35A0A1B0GVV1 85 aa4.6□□□□□ -1.67
SKP1-202ENST00000353411 SOWAHBA6NEL2 793 aa4.6□□□□□ -1.67
SKP1-202ENST00000353411 UPK3BL1B0FP48 263 aa4.6□□□□□ -1.67
SKP1-202ENST00000353411 UPK3BL2E5RIL1 263 aa4.6□□□□□ -1.67
SKP1-202ENST00000353411 KLK8O60259 260 aa4.6□□□□□ -1.67
SKP1-202ENST00000353411 GPANK1O95872 356 aa4.6□□□□□ -1.67
SKP1-202ENST00000353411 PNMTP11086 282 aa4.6□□□□□ -1.67
SKP1-202ENST00000353411 MSX1P28360 303 aa4.6□□□□□ -1.67
SKP1-202ENST00000353411 RPL24P83731 157 aaKnown RBP4.6□□□□□ -1.67
SKP1-202ENST00000353411 FOXK1P85037 733 aa4.6□□□□□ -1.67
SKP1-202ENST00000353411 SLC25A35Q3KQZ1 300 aa4.6□□□□□ -1.67
SKP1-202ENST00000353411 TMEM183AQ8IXX5 376 aa4.6□□□□□ -1.67
SKP1-202ENST00000353411 SLC22A24Q8N4F4 322 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms