RNA–Protein interactions for RNA: ENST00000352886.10

SHMT1-202, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 2 BASIC

Gene SHMT1, Length 2,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-202ENST00000352886 MED12Q93074 2177 aa19.4■□□□□ 0.7
SHMT1-202ENST00000352886 C1orf198Q9H425 327 aa19.4■□□□□ 0.7
SHMT1-202ENST00000352886 EXO5Q9H790 373 aa19.4■□□□□ 0.7
SHMT1-202ENST00000352886 OCIAD1Q9NX40 245 aa19.4■□□□□ 0.7
SHMT1-202ENST00000352886 C19orf25Q9UFG5 118 aaPredicted RBP19.4■□□□□ 0.7
SHMT1-202ENST00000352886 ONECUT2O95948 504 aa19.39■□□□□ 0.69
SHMT1-202ENST00000352886 LAP3P28838 519 aa19.39■□□□□ 0.69
SHMT1-202ENST00000352886 CLRN1P58418 232 aa19.39■□□□□ 0.69
SHMT1-202ENST00000352886 PMPCAQ10713 525 aa19.39■□□□□ 0.69
SHMT1-202ENST00000352886 LYPD6Q86Y78 171 aa19.39■□□□□ 0.69
SHMT1-202ENST00000352886 OR10S1Q8NGN2 331 aa19.39■□□□□ 0.69
SHMT1-202ENST00000352886 RASL10BQ96S79 203 aa19.39■□□□□ 0.69
SHMT1-202ENST00000352886 PLSCR5A0PG75 271 aa19.39■□□□□ 0.69
SHMT1-202ENST00000352886 LINC00862A6NCI5 91 aa19.39■□□□□ 0.69
SHMT1-202ENST00000352886 MEN1O00255 615 aa19.39■□□□□ 0.69
SHMT1-202ENST00000352886 CFDP00746 253 aaPredicted RBP19.39■□□□□ 0.69
SHMT1-202ENST00000352886 POU4F3Q15319 338 aa19.39■□□□□ 0.69
SHMT1-202ENST00000352886 THEM4Q5T1C6 240 aa19.39■□□□□ 0.69
SHMT1-202ENST00000352886 PHF19Q5T6S3 580 aa19.39■□□□□ 0.69
SHMT1-202ENST00000352886 MUC20Q8N307 709 aaPredicted RBP19.39■□□□□ 0.69
SHMT1-202ENST00000352886 OR2M3Q8NG83 312 aa19.39■□□□□ 0.69
SHMT1-202ENST00000352886 OR5B2Q96R09 309 aa19.39■□□□□ 0.69
SHMT1-202ENST00000352886 DEFB126Q9BYW3 111 aa19.39■□□□□ 0.69
SHMT1-202ENST00000352886 UBQLN2Q9UHD9 624 aa19.39■□□□□ 0.69
SHMT1-202ENST00000352886 VPS13AQ96RL7 3174 aa19.38■□□□□ 0.69
SHMT1-202ENST00000352886 SIX6O95475 246 aa19.38■□□□□ 0.69
SHMT1-202ENST00000352886 GNALP38405 381 aa19.38■□□□□ 0.69
SHMT1-202ENST00000352886 DHODHQ02127 395 aa19.38■□□□□ 0.69
SHMT1-202ENST00000352886 OC90Q02509 493 aaPredicted RBP19.38■□□□□ 0.69
SHMT1-202ENST00000352886 C2orf68Q2NKX9 166 aa19.38■□□□□ 0.69
SHMT1-202ENST00000352886 HLA-BQ31612 363 aa19.38■□□□□ 0.69
SHMT1-202ENST00000352886 ELMOD2Q8IZ81 293 aa19.38■□□□□ 0.69
SHMT1-202ENST00000352886 SPACA9Q96E40 222 aaPredicted RBP19.38■□□□□ 0.69
SHMT1-202ENST00000352886 ELMOD3Q96FG2 381 aa19.38■□□□□ 0.69
SHMT1-202ENST00000352886 CHST6Q9GZX3 395 aa19.38■□□□□ 0.69
SHMT1-202ENST00000352886 PBOV1Q9GZY1 135 aa19.38■□□□□ 0.69
SHMT1-202ENST00000352886 SEC61A2Q9H9S3 476 aa19.38■□□□□ 0.69
SHMT1-202ENST00000352886 PRELID1Q9Y255 219 aa19.38■□□□□ 0.69
SHMT1-202ENST00000352886 RHBDD3Q9Y3P4 386 aa19.38■□□□□ 0.69
SHMT1-202ENST00000352886 B3GALT1Q9Y5Z6 326 aa19.38■□□□□ 0.69
SHMT1-202ENST00000352886 GDF9O60383 454 aa19.37■□□□□ 0.69
SHMT1-202ENST00000352886 RAB3DO95716 219 aa19.37■□□□□ 0.69
SHMT1-202ENST00000352886 CXCL2P19875 107 aa19.37■□□□□ 0.69
SHMT1-202ENST00000352886 BDKRB2P30411 391 aa19.37■□□□□ 0.69
SHMT1-202ENST00000352886 P2RY4P51582 365 aa19.37■□□□□ 0.69
SHMT1-202ENST00000352886 H2BFSP57053 126 aa19.37■□□□□ 0.69
SHMT1-202ENST00000352886 GPR85P60893 370 aa19.37■□□□□ 0.69
SHMT1-202ENST00000352886 IKZF1Q13422 519 aa19.37■□□□□ 0.69
SHMT1-202ENST00000352886 CFAP77Q6ZQR2 320 aa19.37■□□□□ 0.69
SHMT1-202ENST00000352886 SLC38A6Q8IZM9 456 aa19.37■□□□□ 0.69
SHMT1-202ENST00000352886 TMEM229BQ8NBD8 167 aa19.37■□□□□ 0.69
SHMT1-202ENST00000352886 NOXO1Q8NFA2 376 aa19.37■□□□□ 0.69
SHMT1-202ENST00000352886 ANGPTL6Q8NI99 470 aa19.37■□□□□ 0.69
SHMT1-202ENST00000352886 NKD1Q969G9 470 aa19.37■□□□□ 0.69
SHMT1-202ENST00000352886 FOXRED1Q96CU9 486 aaPredicted RBP19.37■□□□□ 0.69
SHMT1-202ENST00000352886 B3GNT4Q9C0J1 378 aa19.37■□□□□ 0.69
SHMT1-202ENST00000352886 SLC26A1Q9H2B4 701 aa19.37■□□□□ 0.69
SHMT1-202ENST00000352886 PRO3102Q9H379 93 aa19.37■□□□□ 0.69
SHMT1-202ENST00000352886 CNTD2Q9H8S5 307 aa19.37■□□□□ 0.69
SHMT1-202ENST00000352886 SCPEP1Q9HB40 452 aa19.37■□□□□ 0.69
SHMT1-202ENST00000352886 M0QYG6 137 aa19.37■□□□□ 0.69
SHMT1-202ENST00000352886 SYT7O43581 403 aa19.37■□□□□ 0.69
SHMT1-202ENST00000352886 PGA4P0DJD7 388 aa19.37■□□□□ 0.69
SHMT1-202ENST00000352886 PGA3P0DJD8 388 aa19.37■□□□□ 0.69
SHMT1-202ENST00000352886 OPCMLQ14982 345 aa19.37■□□□□ 0.69
SHMT1-202ENST00000352886 ZNF813Q6ZN06 617 aa19.37■□□□□ 0.69
SHMT1-202ENST00000352886 GALNT16Q8N428 558 aa19.37■□□□□ 0.69
SHMT1-202ENST00000352886 ACBD4Q8NC06 268 aa19.37■□□□□ 0.69
SHMT1-202ENST00000352886 PCNPQ8WW12 178 aaKnown RBP19.37■□□□□ 0.69
SHMT1-202ENST00000352886 TMEM138Q9NPI0 162 aa19.37■□□□□ 0.69
SHMT1-202ENST00000352886 A0A0A6YYH2 397 aa19.36■□□□□ 0.69
SHMT1-202ENST00000352886 A6NJ64 397 aa19.36■□□□□ 0.69
SHMT1-202ENST00000352886 ZNF814B7Z6K7 855 aa19.36■□□□□ 0.69
SHMT1-202ENST00000352886 IGHG1P01857 330 aa19.36■□□□□ 0.69
SHMT1-202ENST00000352886 ENPP1P22413 925 aa19.36■□□□□ 0.69
SHMT1-202ENST00000352886 C4orf46Q504U0 113 aa19.36■□□□□ 0.69
SHMT1-202ENST00000352886 CARD17Q5XLA6 110 aa19.36■□□□□ 0.69
SHMT1-202ENST00000352886 MRPL14Q6P1L8 145 aaKnown RBP19.36■□□□□ 0.69
SHMT1-202ENST00000352886 SPERTQ8NA61 448 aa19.36■□□□□ 0.69
SHMT1-202ENST00000352886 OR2AK2Q8NG84 335 aa19.36■□□□□ 0.69
SHMT1-202ENST00000352886 TNFAIP8L1Q8WVP5 186 aa19.36■□□□□ 0.69
SHMT1-202ENST00000352886 ADAT3Q96EY9 351 aaPredicted RBP19.36■□□□□ 0.69
SHMT1-202ENST00000352886 TINAGL1Q9GZM7 467 aaPredicted RBP19.36■□□□□ 0.69
SHMT1-202ENST00000352886 PISDQ9UG56 409 aa19.36■□□□□ 0.69
SHMT1-202ENST00000352886 OPN4Q9UHM6 478 aa19.36■□□□□ 0.69
SHMT1-202ENST00000352886 GDF2Q9UK05 429 aaPredicted RBP19.36■□□□□ 0.69
SHMT1-202ENST00000352886 POLR1DQ9Y2S0 133 aa19.36■□□□□ 0.69
SHMT1-202ENST00000352886 LHFPL6Q9Y693 200 aa19.36■□□□□ 0.69
SHMT1-202ENST00000352886 RPS10-NUDT3A0A1W2PQS6 291 aa19.36■□□□□ 0.69
SHMT1-202ENST00000352886 TMEM235A6NFC5 223 aa19.36■□□□□ 0.69
SHMT1-202ENST00000352886 ZSCAN5BA6NJL1 495 aa19.36■□□□□ 0.69
SHMT1-202ENST00000352886 L7N2F9 121 aa19.36■□□□□ 0.69
SHMT1-202ENST00000352886 GOSR2O14653 212 aa19.36■□□□□ 0.69
SHMT1-202ENST00000352886 CYB5AP00167 134 aa19.36■□□□□ 0.69
SHMT1-202ENST00000352886 ITGB2P05107 769 aa19.36■□□□□ 0.69
SHMT1-202ENST00000352886 NFYAP23511 347 aaPredicted RBP19.36■□□□□ 0.69
SHMT1-202ENST00000352886 CDAP32320 146 aa19.36■□□□□ 0.69
SHMT1-202ENST00000352886 SFTPDP35247 375 aa19.36■□□□□ 0.69
SHMT1-202ENST00000352886 MFAP5Q13361 173 aa19.36■□□□□ 0.69
SHMT1-202ENST00000352886 PRAMEF20Q5VT98 475 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms