RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 1 (best) BASIC

Gene UPF3A, Length 2,235 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 ZNF813Q6ZN06 617 aa19.71■□□□□ 0.75
UPF3A-201ENST00000351487 OR10S1Q8NGN2 331 aa19.71■□□□□ 0.75
UPF3A-201ENST00000351487 ASB13Q8WXK3 278 aa19.71■□□□□ 0.75
UPF3A-201ENST00000351487 SLC25A21Q9BQT8 299 aaPredicted RBP19.71■□□□□ 0.75
UPF3A-201ENST00000351487 CRB3Q9BUF7 120 aa19.71■□□□□ 0.75
UPF3A-201ENST00000351487 METTL7AQ9H8H3 244 aa19.71■□□□□ 0.75
UPF3A-201ENST00000351487 PI4KAP42356 2102 aa19.7■□□□□ 0.74
UPF3A-201ENST00000351487 HMSDA8MTL9 139 aa19.7■□□□□ 0.74
UPF3A-201ENST00000351487 EIF1AYO14602 144 aaKnown RBP19.7■□□□□ 0.74
UPF3A-201ENST00000351487 CD74P04233 296 aa19.7■□□□□ 0.74
UPF3A-201ENST00000351487 LAP3P28838 519 aa19.7■□□□□ 0.74
UPF3A-201ENST00000351487 AP2S1P53680 142 aaPredicted RBP19.7■□□□□ 0.74
UPF3A-201ENST00000351487 C2orf68Q2NKX9 166 aa19.7■□□□□ 0.74
UPF3A-201ENST00000351487 FAM69BQ5VUD6 431 aa19.7■□□□□ 0.74
UPF3A-201ENST00000351487 SLC22A8Q8TCC7 542 aa19.7■□□□□ 0.74
UPF3A-201ENST00000351487 GLTPQ9NZD2 209 aa19.7■□□□□ 0.74
UPF3A-201ENST00000351487 GDF2Q9UK05 429 aaPredicted RBP19.7■□□□□ 0.74
UPF3A-201ENST00000351487 OR2J2O76002 312 aa19.7■□□□□ 0.74
UPF3A-201ENST00000351487 CYC1P08574 325 aa19.7■□□□□ 0.74
UPF3A-201ENST00000351487 BDKRB2P30411 391 aa19.7■□□□□ 0.74
UPF3A-201ENST00000351487 MOGAT2Q3SYC2 334 aa19.7■□□□□ 0.74
UPF3A-201ENST00000351487 KLHL24Q6TFL4 600 aa19.7■□□□□ 0.74
UPF3A-201ENST00000351487 UEVLDQ8IX04 471 aa19.7■□□□□ 0.74
UPF3A-201ENST00000351487 NOXO1Q8NFA2 376 aa19.7■□□□□ 0.74
UPF3A-201ENST00000351487 GSX2Q9BZM3 304 aa19.7■□□□□ 0.74
UPF3A-201ENST00000351487 MYOZ1Q9NP98 299 aaPredicted RBP19.7■□□□□ 0.74
UPF3A-201ENST00000351487 C19orf25Q9UFG5 118 aaPredicted RBP19.7■□□□□ 0.74
UPF3A-201ENST00000351487 F5H5P2 479 aa19.69■□□□□ 0.74
UPF3A-201ENST00000351487 DKK1O94907 266 aa19.69■□□□□ 0.74
UPF3A-201ENST00000351487 ENPP1P22413 925 aa19.69■□□□□ 0.74
UPF3A-201ENST00000351487 RAB12Q6IQ22 244 aa19.69■□□□□ 0.74
UPF3A-201ENST00000351487 GALNT16Q8N428 558 aa19.69■□□□□ 0.74
UPF3A-201ENST00000351487 CCDC107Q8WV48 283 aa19.69■□□□□ 0.74
UPF3A-201ENST00000351487 CCDC74BQ96LY2 380 aa19.69■□□□□ 0.74
UPF3A-201ENST00000351487 PBOV1Q9GZY1 135 aa19.69■□□□□ 0.74
UPF3A-201ENST00000351487 PMS2P2O95744 297 aa19.68■□□□□ 0.74
UPF3A-201ENST00000351487 CYB5AP00167 134 aa19.68■□□□□ 0.74
UPF3A-201ENST00000351487 FCER2P06734 321 aa19.68■□□□□ 0.74
UPF3A-201ENST00000351487 PGA4P0DJD7 388 aa19.68■□□□□ 0.74
UPF3A-201ENST00000351487 PGA3P0DJD8 388 aa19.68■□□□□ 0.74
UPF3A-201ENST00000351487 SEC61A1P61619 476 aaKnown RBP19.68■□□□□ 0.74
UPF3A-201ENST00000351487 OR10K2Q6IF99 312 aa19.68■□□□□ 0.74
UPF3A-201ENST00000351487 OR2M3Q8NG83 312 aa19.68■□□□□ 0.74
UPF3A-201ENST00000351487 TNFAIP8L1Q8WVP5 186 aa19.68■□□□□ 0.74
UPF3A-201ENST00000351487 AQP3Q92482 292 aa19.68■□□□□ 0.74
UPF3A-201ENST00000351487 FGGYQ96C11 551 aa19.68■□□□□ 0.74
UPF3A-201ENST00000351487 SFXN2Q96NB2 322 aa19.68■□□□□ 0.74
UPF3A-201ENST00000351487 CNTD2Q9H8S5 307 aa19.68■□□□□ 0.74
UPF3A-201ENST00000351487 RAB22AQ9UL26 194 aa19.68■□□□□ 0.74
UPF3A-201ENST00000351487 H3BUI4 141 aa19.68■□□□□ 0.74
UPF3A-201ENST00000351487 GOSR2O14653 212 aa19.68■□□□□ 0.74
UPF3A-201ENST00000351487 SHOXO15266 292 aa19.68■□□□□ 0.74
UPF3A-201ENST00000351487 TRAF3IP2O43734 574 aaPredicted RBP19.68■□□□□ 0.74
UPF3A-201ENST00000351487 ZNF735P0CB33 412 aa19.68■□□□□ 0.74
UPF3A-201ENST00000351487 ZNF35P13682 527 aa19.68■□□□□ 0.74
UPF3A-201ENST00000351487 RAB14P61106 215 aa19.68■□□□□ 0.74
UPF3A-201ENST00000351487 PHF19Q5T6S3 580 aa19.68■□□□□ 0.74
UPF3A-201ENST00000351487 LYSMD4Q5XG99 296 aa19.68■□□□□ 0.74
UPF3A-201ENST00000351487 ZNF529Q6P280 563 aa19.68■□□□□ 0.74
UPF3A-201ENST00000351487 IDO2Q6ZQW0 420 aa19.68■□□□□ 0.74
UPF3A-201ENST00000351487 PPP1R3BQ86XI6 285 aa19.68■□□□□ 0.74
UPF3A-201ENST00000351487 SAP25Q8TEE9 199 aa19.68■□□□□ 0.74
UPF3A-201ENST00000351487 SPACA9Q96E40 222 aaPredicted RBP19.68■□□□□ 0.74
UPF3A-201ENST00000351487 GAL3ST1Q99999 423 aa19.68■□□□□ 0.74
UPF3A-201ENST00000351487 UQCC2Q9BRT2 126 aa19.68■□□□□ 0.74
UPF3A-201ENST00000351487 CHST6Q9GZX3 395 aa19.68■□□□□ 0.74
UPF3A-201ENST00000351487 TMEM138Q9NPI0 162 aa19.68■□□□□ 0.74
UPF3A-201ENST00000351487 KLK13Q9UKR3 277 aa19.68■□□□□ 0.74
UPF3A-201ENST00000351487 TNRC6BQ9UPQ9 1833 aaKnown RBP19.68■□□□□ 0.74
UPF3A-201ENST00000351487 TMEM82A0PJX8 343 aa19.67■□□□□ 0.74
UPF3A-201ENST00000351487 METTL21EPA6NDL7 271 aa19.67■□□□□ 0.74
UPF3A-201ENST00000351487 ZNF736B4DX44 427 aaPredicted RBP19.67■□□□□ 0.74
UPF3A-201ENST00000351487 SYT7O43581 403 aa19.67■□□□□ 0.74
UPF3A-201ENST00000351487 SIGLEC6O43699 453 aa19.67■□□□□ 0.74
UPF3A-201ENST00000351487 IGHG1P01857 330 aa19.67■□□□□ 0.74
UPF3A-201ENST00000351487 C4orf46Q504U0 113 aa19.67■□□□□ 0.74
UPF3A-201ENST00000351487 LCN10Q6JVE6 187 aa19.67■□□□□ 0.74
UPF3A-201ENST00000351487 TSSK4Q6SA08 328 aa19.67■□□□□ 0.74
UPF3A-201ENST00000351487 C3P1Q6ZMU1 363 aa19.67■□□□□ 0.74
UPF3A-201ENST00000351487 RHOUQ7L0Q8 258 aa19.67■□□□□ 0.74
UPF3A-201ENST00000351487 HDDC2Q7Z4H3 204 aa19.67■□□□□ 0.74
UPF3A-201ENST00000351487 ADAT3Q96EY9 351 aaPredicted RBP19.67■□□□□ 0.74
UPF3A-201ENST00000351487 EDEM2Q9BV94 578 aa19.67■□□□□ 0.74
UPF3A-201ENST00000351487 TINAGL1Q9GZM7 467 aaPredicted RBP19.67■□□□□ 0.74
UPF3A-201ENST00000351487 POFUT1Q9H488 388 aa19.67■□□□□ 0.74
UPF3A-201ENST00000351487 MOB1AQ9H8S9 216 aa19.67■□□□□ 0.74
UPF3A-201ENST00000351487 LHFPL6Q9Y693 200 aa19.67■□□□□ 0.74
UPF3A-201ENST00000351487 RAB27BO00194 218 aa19.67■□□□□ 0.74
UPF3A-201ENST00000351487 SIX6O95475 246 aa19.67■□□□□ 0.74
UPF3A-201ENST00000351487 AMY2AP04746 511 aa19.67■□□□□ 0.74
UPF3A-201ENST00000351487 DCNP07585 359 aaKnown RBP19.67■□□□□ 0.74
UPF3A-201ENST00000351487 EIF1AXP47813 144 aaKnown RBP19.67■□□□□ 0.74
UPF3A-201ENST00000351487 CLRN1P58418 232 aa19.67■□□□□ 0.74
UPF3A-201ENST00000351487 UBE2MP61081 183 aaKnown RBP19.67■□□□□ 0.74
UPF3A-201ENST00000351487 ZNF239Q16600 458 aaKnown RBP19.67■□□□□ 0.74
UPF3A-201ENST00000351487 NHLRC3Q5JS37 347 aa19.67■□□□□ 0.74
UPF3A-201ENST00000351487 DCAF12L2Q5VW00 463 aa19.67■□□□□ 0.74
UPF3A-201ENST00000351487 CFAP77Q6ZQR2 320 aa19.67■□□□□ 0.74
UPF3A-201ENST00000351487 COMMD7Q86VX2 200 aa19.67■□□□□ 0.74
UPF3A-201ENST00000351487 SLC22A24Q8N4F4 322 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms