RNA–Protein interactions for RNA: ENST00000349379.5

SNX3-202, Transcript of sorting nexin 3, humanhuman

TSL 2 BASIC

Gene SNX3, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-202ENST00000349379 CSPG4Q6UVK1 2322 aa18.89■□□□□ 0.61
SNX3-202ENST00000349379 VWC2LB2RUY7 222 aa18.89■□□□□ 0.61
SNX3-202ENST00000349379 H3BNX3 289 aa18.89■□□□□ 0.61
SNX3-202ENST00000349379 ERCC1P07992 297 aaPredicted RBP18.89■□□□□ 0.61
SNX3-202ENST00000349379 ZNF23P17027 643 aa18.89■□□□□ 0.61
SNX3-202ENST00000349379 FMO3P31513 532 aa18.89■□□□□ 0.61
SNX3-202ENST00000349379 PDLIM4P50479 330 aa18.89■□□□□ 0.61
SNX3-202ENST00000349379 TEX30Q5JUR7 227 aa18.89■□□□□ 0.61
SNX3-202ENST00000349379 ZNF511Q8NB15 262 aa18.89■□□□□ 0.61
SNX3-202ENST00000349379 OR10S1Q8NGN2 331 aa18.89■□□□□ 0.61
SNX3-202ENST00000349379 OR2AJ1Q8NGZ0 328 aa18.89■□□□□ 0.61
SNX3-202ENST00000349379 POFUT1Q9H488 388 aa18.89■□□□□ 0.61
SNX3-202ENST00000349379 MED20Q9H944 212 aa18.89■□□□□ 0.61
SNX3-202ENST00000349379 WDR76Q9H967 626 aa18.89■□□□□ 0.61
SNX3-202ENST00000349379 MARCH7Q9H992 704 aa18.89■□□□□ 0.61
SNX3-202ENST00000349379 GPR160Q9UJ42 338 aa18.89■□□□□ 0.61
SNX3-202ENST00000349379 GRIP1Q9Y3R0 1128 aa18.89■□□□□ 0.61
SNX3-202ENST00000349379 NDUFS8O00217 210 aa18.88■□□□□ 0.61
SNX3-202ENST00000349379 SMAD7O15105 426 aaKnown RBP18.88■□□□□ 0.61
SNX3-202ENST00000349379 NAT2P11245 290 aa18.88■□□□□ 0.61
SNX3-202ENST00000349379 SLC25A16P16260 332 aa18.88■□□□□ 0.61
SNX3-202ENST00000349379 GCH1P30793 250 aa18.88■□□□□ 0.61
SNX3-202ENST00000349379 RPS27P42677 84 aaKnown RBP18.88■□□□□ 0.61
SNX3-202ENST00000349379 ENTPD1P49961 510 aa18.88■□□□□ 0.61
SNX3-202ENST00000349379 ESRRGP62508 458 aa18.88■□□□□ 0.61
SNX3-202ENST00000349379 ECH1Q13011 328 aa18.88■□□□□ 0.61
SNX3-202ENST00000349379 NKPD1Q17RQ9 610 aa18.88■□□□□ 0.61
SNX3-202ENST00000349379 TMEM236Q5W0B7 351 aa18.88■□□□□ 0.61
SNX3-202ENST00000349379 ZFP1Q6P2D0 407 aa18.88■□□□□ 0.61
SNX3-202ENST00000349379 COLCA1Q6ZS62 124 aa18.88■□□□□ 0.61
SNX3-202ENST00000349379 ATF6BQ99941 703 aa18.88■□□□□ 0.61
SNX3-202ENST00000349379 HINT3Q9NQE9 182 aaKnown RBP18.88■□□□□ 0.61
SNX3-202ENST00000349379 KRT84Q9NSB2 600 aa18.88■□□□□ 0.61
SNX3-202ENST00000349379 DDX28Q9NUL7 540 aaKnown RBP18.88■□□□□ 0.61
SNX3-202ENST00000349379 TMEFF2Q9UIK5 374 aaPredicted RBP18.88■□□□□ 0.61
SNX3-202ENST00000349379 ZANQ9Y493 2812 aa18.88■□□□□ 0.61
SNX3-202ENST00000349379 LOC390937A0A1W2PQ73 354 aa18.87■□□□□ 0.61
SNX3-202ENST00000349379 C17orf100A8MU93 164 aa18.87■□□□□ 0.61
SNX3-202ENST00000349379 MITFO75030 526 aaPredicted RBP18.87■□□□□ 0.61
SNX3-202ENST00000349379 GLCEO94923 617 aa18.87■□□□□ 0.61
SNX3-202ENST00000349379 DAOP14920 347 aa18.87■□□□□ 0.61
SNX3-202ENST00000349379 RGS6P49758 472 aa18.87■□□□□ 0.61
SNX3-202ENST00000349379 MMP15P51511 669 aa18.87■□□□□ 0.61
SNX3-202ENST00000349379 PPP2R2BQ00005 443 aa18.87■□□□□ 0.61
SNX3-202ENST00000349379 MOGQ16653 247 aa18.87■□□□□ 0.61
SNX3-202ENST00000349379 OR6K6Q8NGW6 343 aa18.87■□□□□ 0.61
SNX3-202ENST00000349379 COG8Q96MW5 612 aa18.87■□□□□ 0.61
SNX3-202ENST00000349379 PITX2Q99697 317 aa18.87■□□□□ 0.61
SNX3-202ENST00000349379 SEMA6AQ9H2E6 1030 aa18.87■□□□□ 0.61
SNX3-202ENST00000349379 NKIRAS2Q9NYR9 191 aa18.87■□□□□ 0.61
SNX3-202ENST00000349379 STARD10Q9Y365 291 aa18.87■□□□□ 0.61
SNX3-202ENST00000349379 TLN2Q9Y4G6 2542 aa18.87■□□□□ 0.61
SNX3-202ENST00000349379 PRR23D1E9PI22 279 aaPredicted RBP18.86■□□□□ 0.61
SNX3-202ENST00000349379 PRR23D2P0DMB1 279 aaPredicted RBP18.86■□□□□ 0.61
SNX3-202ENST00000349379 PAICSP22234 425 aaKnown RBP18.86■□□□□ 0.61
SNX3-202ENST00000349379 OTX1P32242 354 aaPredicted RBP18.86■□□□□ 0.61
SNX3-202ENST00000349379 KRTAP1-1Q07627 177 aa18.86■□□□□ 0.61
SNX3-202ENST00000349379 LOXL1Q08397 574 aaPredicted RBP18.86■□□□□ 0.61
SNX3-202ENST00000349379 PTGES3Q15185 160 aaKnown RBP18.86■□□□□ 0.61
SNX3-202ENST00000349379 ALKBH6Q3KRA9 238 aa18.86■□□□□ 0.61
SNX3-202ENST00000349379 PLBD1Q6P4A8 553 aa18.86■□□□□ 0.61
SNX3-202ENST00000349379 ZNF786Q8N393 782 aa18.86■□□□□ 0.61
SNX3-202ENST00000349379 UBASH3BQ8TF42 649 aa18.86■□□□□ 0.61
SNX3-202ENST00000349379 SNX33Q8WV41 574 aa18.86■□□□□ 0.61
SNX3-202ENST00000349379 APOBEC3DQ96AK3 386 aaPredicted RBP18.86■□□□□ 0.61
SNX3-202ENST00000349379 CGGBP1Q9UFW8 167 aaPredicted RBP18.86■□□□□ 0.61
SNX3-202ENST00000349379 OAZ3Q9UMX2 235 aa18.86■□□□□ 0.61
SNX3-202ENST00000349379 ZNF593O00488 134 aaPredicted RBP18.85■□□□□ 0.61
SNX3-202ENST00000349379 PRODHO43272 600 aa18.85■□□□□ 0.61
SNX3-202ENST00000349379 NCR1O76036 304 aa18.85■□□□□ 0.61
SNX3-202ENST00000349379 LY6G6DO95868 133 aa18.85■□□□□ 0.61
SNX3-202ENST00000349379 HPXP02790 462 aa18.85■□□□□ 0.61
SNX3-202ENST00000349379 HEXAP06865 529 aa18.85■□□□□ 0.61
SNX3-202ENST00000349379 ACSM4P0C7M7 580 aa18.85■□□□□ 0.61
SNX3-202ENST00000349379 KITLGP21583 273 aa18.85■□□□□ 0.61
SNX3-202ENST00000349379 SLC2A5P22732 501 aa18.85■□□□□ 0.61
SNX3-202ENST00000349379 GIFP27352 417 aa18.85■□□□□ 0.61
SNX3-202ENST00000349379 PSG7Q13046 419 aa18.85■□□□□ 0.61
SNX3-202ENST00000349379 TMEM154Q6P9G4 183 aa18.85■□□□□ 0.61
SNX3-202ENST00000349379 DCXRQ7Z4W1 244 aa18.85■□□□□ 0.61
SNX3-202ENST00000349379 CPOQ8IVL8 374 aa18.85■□□□□ 0.61
SNX3-202ENST00000349379 TIGD4Q8IY51 512 aa18.85■□□□□ 0.61
SNX3-202ENST00000349379 MAPK1IP1LQ8NDC0 245 aa18.85■□□□□ 0.61
SNX3-202ENST00000349379 ST7LQ8TDW4 575 aa18.85■□□□□ 0.61
SNX3-202ENST00000349379 GTF3AQ92664 365 aaKnown RBP18.85■□□□□ 0.61
SNX3-202ENST00000349379 PKP2Q99959 881 aa18.85■□□□□ 0.61
SNX3-202ENST00000349379 OSBPL10Q9BXB5 764 aa18.85■□□□□ 0.61
SNX3-202ENST00000349379 C1QTNF5Q9BXJ0 243 aa18.85■□□□□ 0.61
SNX3-202ENST00000349379 TEX12Q9BXU0 123 aa18.85■□□□□ 0.61
SNX3-202ENST00000349379 ZAR1LA6NP61 321 aa18.84■□□□□ 0.61
SNX3-202ENST00000349379 ADH4P08319 380 aa18.84■□□□□ 0.61
SNX3-202ENST00000349379 SPARCP09486 303 aa18.84■□□□□ 0.61
SNX3-202ENST00000349379 EPHA2P29317 976 aa18.84■□□□□ 0.61
SNX3-202ENST00000349379 GSTT1P30711 240 aa18.84■□□□□ 0.61
SNX3-202ENST00000349379 LIPAP38571 399 aa18.84■□□□□ 0.61
SNX3-202ENST00000349379 MAGEB1P43366 347 aa18.84■□□□□ 0.61
SNX3-202ENST00000349379 PCGF3Q3KNV8 242 aa18.84■□□□□ 0.61
SNX3-202ENST00000349379 SLX4IPQ5VYV7 408 aa18.84■□□□□ 0.61
SNX3-202ENST00000349379 CLEC9AQ6UXN8 241 aa18.84■□□□□ 0.61
SNX3-202ENST00000349379 RAB3IPQ96QF0 476 aaPredicted RBP18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 224.3 ms