RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 CENPAP49450 140 aa16.76■□□□□ 0.27
SCARF1-202ENST00000348987 OR2B8PP59922 312 aa16.76■□□□□ 0.27
SCARF1-202ENST00000348987 NNATQ16517 81 aa16.76■□□□□ 0.27
SCARF1-202ENST00000348987 PNLIPRP3Q17RR3 467 aa16.76■□□□□ 0.27
SCARF1-202ENST00000348987 ZNF542PQ5EBM4 170 aa16.76■□□□□ 0.27
SCARF1-202ENST00000348987 ASPHD2Q6ICH7 369 aa16.76■□□□□ 0.27
SCARF1-202ENST00000348987 LINC00114Q6XXX2 140 aa16.76■□□□□ 0.27
SCARF1-202ENST00000348987 DPY19L4Q7Z388 723 aa16.76■□□□□ 0.27
SCARF1-202ENST00000348987 FAM219AQ8IW50 185 aa16.76■□□□□ 0.27
SCARF1-202ENST00000348987 BHLHE23Q8NDY6 225 aa16.76■□□□□ 0.27
SCARF1-202ENST00000348987 FAM174AQ8TBP5 190 aa16.76■□□□□ 0.27
SCARF1-202ENST00000348987 SLC41A2Q96JW4 573 aa16.76■□□□□ 0.27
SCARF1-202ENST00000348987 GGACTQ9BVM4 153 aa16.76■□□□□ 0.27
SCARF1-202ENST00000348987 TCEAL2Q9H3H9 227 aaPredicted RBP16.76■□□□□ 0.27
SCARF1-202ENST00000348987 FBXL21Q9UKT6 434 aa16.76■□□□□ 0.27
SCARF1-202ENST00000348987 SDK1Q7Z5N4 2213 aa16.75■□□□□ 0.27
SCARF1-202ENST00000348987 H7C1C5 153 aa16.75■□□□□ 0.27
SCARF1-202ENST00000348987 ZNF432O94892 652 aa16.75■□□□□ 0.27
SCARF1-202ENST00000348987 KLF8O95600 359 aaPredicted RBP16.75■□□□□ 0.27
SCARF1-202ENST00000348987 SERPINA5P05154 406 aa16.75■□□□□ 0.27
SCARF1-202ENST00000348987 CD5P06127 495 aa16.75■□□□□ 0.27
SCARF1-202ENST00000348987 SELLP14151 372 aa16.75■□□□□ 0.27
SCARF1-202ENST00000348987 DAOP14920 347 aa16.75■□□□□ 0.27
SCARF1-202ENST00000348987 ACKR3P25106 362 aa16.75■□□□□ 0.27
SCARF1-202ENST00000348987 ID4P47928 161 aa16.75■□□□□ 0.27
SCARF1-202ENST00000348987 SSTP61278 116 aa16.75■□□□□ 0.27
SCARF1-202ENST00000348987 LCN6P62502 163 aa16.75■□□□□ 0.27
SCARF1-202ENST00000348987 PSG6Q00889 435 aa16.75■□□□□ 0.27
SCARF1-202ENST00000348987 DMWDQ09019 674 aa16.75■□□□□ 0.27
SCARF1-202ENST00000348987 TMEM244Q5VVB8 128 aa16.75■□□□□ 0.27
SCARF1-202ENST00000348987 OR6N2Q8NGY6 317 aa16.75■□□□□ 0.27
SCARF1-202ENST00000348987 RERGQ96A58 199 aaPredicted RBP16.75■□□□□ 0.27
SCARF1-202ENST00000348987 ANKRD9Q96BM1 317 aaPredicted RBP16.75■□□□□ 0.27
SCARF1-202ENST00000348987 SMIM8Q96KF7 97 aa16.75■□□□□ 0.27
SCARF1-202ENST00000348987 MAP3K3Q99759 626 aa16.75■□□□□ 0.27
SCARF1-202ENST00000348987 TRIM2Q9C040 744 aa16.75■□□□□ 0.27
SCARF1-202ENST00000348987 SYT4Q9H2B2 425 aa16.75■□□□□ 0.27
SCARF1-202ENST00000348987 SLC17A5Q9NRA2 495 aa16.75■□□□□ 0.27
SCARF1-202ENST00000348987 DNAJB12Q9NXW2 375 aaKnown RBP16.75■□□□□ 0.27
SCARF1-202ENST00000348987 A0A087WV62 115 aa16.75■□□□□ 0.27
SCARF1-202ENST00000348987 A0A1W2PPH5 198 aa16.75■□□□□ 0.27
SCARF1-202ENST00000348987 URADA6NGE7 173 aa16.75■□□□□ 0.27
SCARF1-202ENST00000348987 GPANK1O95872 356 aa16.75■□□□□ 0.27
SCARF1-202ENST00000348987 CELA2BP08218 269 aaPredicted RBP16.75■□□□□ 0.27
SCARF1-202ENST00000348987 SNRNP70P08621 437 aaKnown RBP16.75■□□□□ 0.27
SCARF1-202ENST00000348987 KIR3DL2P43630 455 aa16.75■□□□□ 0.27
SCARF1-202ENST00000348987 PGDP52209 483 aa16.75■□□□□ 0.27
SCARF1-202ENST00000348987 STARD6P59095 220 aa16.75■□□□□ 0.27
SCARF1-202ENST00000348987 ADAM5Q6NVV9 412 aa16.75■□□□□ 0.27
SCARF1-202ENST00000348987 LRRC69Q6ZNQ3 347 aa16.75■□□□□ 0.27
SCARF1-202ENST00000348987 ZNF584Q8IVC4 421 aa16.75■□□□□ 0.27
SCARF1-202ENST00000348987 PPP1R14AQ96A00 147 aa16.75■□□□□ 0.27
SCARF1-202ENST00000348987 IP6K3Q96PC2 410 aa16.75■□□□□ 0.27
SCARF1-202ENST00000348987 DMRT1Q9Y5R6 373 aa16.75■□□□□ 0.27
SCARF1-202ENST00000348987 PRKNO60260 465 aaPredicted RBP16.74■□□□□ 0.27
SCARF1-202ENST00000348987 MED6O75586 246 aa16.74■□□□□ 0.27
SCARF1-202ENST00000348987 RNF224P0DH78 156 aa16.74■□□□□ 0.27
SCARF1-202ENST00000348987 PMPCAQ10713 525 aa16.74■□□□□ 0.27
SCARF1-202ENST00000348987 WDR38Q5JTN6 314 aa16.74■□□□□ 0.27
SCARF1-202ENST00000348987 GLYATL3Q5SZD4 288 aa16.74■□□□□ 0.27
SCARF1-202ENST00000348987 FAM166AQ6J272 317 aa16.74■□□□□ 0.27
SCARF1-202ENST00000348987 ULK3Q6PHR2 472 aa16.74■□□□□ 0.27
SCARF1-202ENST00000348987 CDC20BQ86Y33 519 aa16.74■□□□□ 0.27
SCARF1-202ENST00000348987 ADAMTS17Q8TE56 1095 aa16.74■□□□□ 0.27
SCARF1-202ENST00000348987 CTHRC1Q96CG8 243 aa16.74■□□□□ 0.27
SCARF1-202ENST00000348987 STACQ99469 402 aa16.74■□□□□ 0.27
SCARF1-202ENST00000348987 WDR76Q9H967 626 aa16.74■□□□□ 0.27
SCARF1-202ENST00000348987 LYRM4Q9HD34 91 aa16.74■□□□□ 0.27
SCARF1-202ENST00000348987 GTF2A1LQ9UNN4 478 aa16.74■□□□□ 0.27
SCARF1-202ENST00000348987 FANCMQ8IYD8 2048 aa16.74■□□□□ 0.27
SCARF1-202ENST00000348987 MBTPS2O43462 519 aa16.74■□□□□ 0.27
SCARF1-202ENST00000348987 FCGR3AP08637 254 aa16.74■□□□□ 0.27
SCARF1-202ENST00000348987 SLC22A6Q4U2R8 563 aa16.74■□□□□ 0.27
SCARF1-202ENST00000348987 RNASE10Q5GAN6 216 aaKnown RBP16.74■□□□□ 0.27
SCARF1-202ENST00000348987 CA13Q8N1Q1 262 aa16.74■□□□□ 0.27
SCARF1-202ENST00000348987 GVQW1Q8N7I0 195 aa16.74■□□□□ 0.27
SCARF1-202ENST00000348987 SECTM1Q8WVN6 248 aa16.74■□□□□ 0.27
SCARF1-202ENST00000348987 KIRREL1Q96J84 757 aa16.74■□□□□ 0.27
SCARF1-202ENST00000348987 GABRG3Q99928 467 aa16.74■□□□□ 0.27
SCARF1-202ENST00000348987 PRRT1Q99946 306 aa16.74■□□□□ 0.27
SCARF1-202ENST00000348987 FAM60AQ9NP50 221 aa16.74■□□□□ 0.27
SCARF1-202ENST00000348987 ASH2LQ9UBL3 628 aa16.74■□□□□ 0.27
SCARF1-202ENST00000348987 CGGBP1Q9UFW8 167 aaPredicted RBP16.74■□□□□ 0.27
SCARF1-202ENST00000348987 MFNGO00587 321 aa16.73■□□□□ 0.27
SCARF1-202ENST00000348987 EIF1AYO14602 144 aaKnown RBP16.73■□□□□ 0.27
SCARF1-202ENST00000348987 PPIHO43447 177 aaKnown RBP16.73■□□□□ 0.27
SCARF1-202ENST00000348987 LRP3O75074 770 aa16.73■□□□□ 0.27
SCARF1-202ENST00000348987 MAOAP21397 527 aa16.73■□□□□ 0.27
SCARF1-202ENST00000348987 LAP3P28838 519 aa16.73■□□□□ 0.27
SCARF1-202ENST00000348987 TACR3P29371 465 aa16.73■□□□□ 0.27
SCARF1-202ENST00000348987 EIF1AXP47813 144 aaKnown RBP16.73■□□□□ 0.27
SCARF1-202ENST00000348987 CSNK1EP49674 416 aaKnown RBP16.73■□□□□ 0.27
SCARF1-202ENST00000348987 OR9A4Q8NGU2 314 aa16.73■□□□□ 0.27
SCARF1-202ENST00000348987 AMELYQ99218 206 aa16.73■□□□□ 0.27
SCARF1-202ENST00000348987 GAS2L1Q99501 681 aaPredicted RBP16.73■□□□□ 0.27
SCARF1-202ENST00000348987 C20orf24Q9BUV8 137 aa16.73■□□□□ 0.27
SCARF1-202ENST00000348987 LMAN2LQ9H0V9 348 aa16.73■□□□□ 0.27
SCARF1-202ENST00000348987 SLCO5A1Q9H2Y9 848 aa16.73■□□□□ 0.27
SCARF1-202ENST00000348987 TMPRSS5Q9H3S3 457 aa16.73■□□□□ 0.27
SCARF1-202ENST00000348987 HRASLS2Q9NWW9 162 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms