RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 ARR3P36575 388 aa16.52■□□□□ 0.24
CHMP4A-201ENST00000347519 GTF2A1P52655 376 aaPredicted RBP16.52■□□□□ 0.24
CHMP4A-201ENST00000347519 WNT4P56705 351 aa16.52■□□□□ 0.24
CHMP4A-201ENST00000347519 HGFACQ04756 655 aa16.52■□□□□ 0.24
CHMP4A-201ENST00000347519 KRTAP27-1Q3LI81 207 aa16.52■□□□□ 0.24
CHMP4A-201ENST00000347519 LIPNQ5VXI9 398 aa16.52■□□□□ 0.24
CHMP4A-201ENST00000347519 KCTD18Q6PI47 426 aaPredicted RBP16.52■□□□□ 0.24
CHMP4A-201ENST00000347519 XKRXQ6PP77 449 aa16.52■□□□□ 0.24
CHMP4A-201ENST00000347519 SEZ6L2Q6UXD5 910 aa16.52■□□□□ 0.24
CHMP4A-201ENST00000347519 KLBQ86Z14 1044 aa16.52■□□□□ 0.24
CHMP4A-201ENST00000347519 CCDC36Q8IYA8 594 aa16.52■□□□□ 0.24
CHMP4A-201ENST00000347519 SYS1Q8N2H4 156 aa16.52■□□□□ 0.24
CHMP4A-201ENST00000347519 YIPF7Q8N8F6 280 aa16.52■□□□□ 0.24
CHMP4A-201ENST00000347519 NANOS1Q8WY41 292 aaKnown RBP16.52■□□□□ 0.24
CHMP4A-201ENST00000347519 ATF6BQ99941 703 aa16.52■□□□□ 0.24
CHMP4A-201ENST00000347519 MRPS26Q9BYN8 205 aaKnown RBP16.52■□□□□ 0.24
CHMP4A-201ENST00000347519 NPAP1Q9NZP6 1156 aa16.52■□□□□ 0.24
CHMP4A-201ENST00000347519 AMDHD2Q9Y303 409 aa16.52■□□□□ 0.24
CHMP4A-201ENST00000347519 SIRT4Q9Y6E7 314 aaPredicted RBP16.52■□□□□ 0.24
CHMP4A-201ENST00000347519 LOC100509620A0A075B734 347 aa16.51■□□□□ 0.23
CHMP4A-201ENST00000347519 SRSF10O75494 262 aaKnown RBP16.51■□□□□ 0.23
CHMP4A-201ENST00000347519 SULT1C4O75897 302 aa16.51■□□□□ 0.23
CHMP4A-201ENST00000347519 RPP14O95059 124 aaKnown RBP16.51■□□□□ 0.23
CHMP4A-201ENST00000347519 CCL2P13500 99 aa16.51■□□□□ 0.23
CHMP4A-201ENST00000347519 CBR1P16152 277 aa16.51■□□□□ 0.23
CHMP4A-201ENST00000347519 ZNF14P17017 642 aaPredicted RBP16.51■□□□□ 0.23
CHMP4A-201ENST00000347519 CRYGSP22914 178 aa16.51■□□□□ 0.23
CHMP4A-201ENST00000347519 HTR5AP47898 357 aa16.51■□□□□ 0.23
CHMP4A-201ENST00000347519 PRKXP51817 358 aa16.51■□□□□ 0.23
CHMP4A-201ENST00000347519 ACTA2P62736 377 aa16.51■□□□□ 0.23
CHMP4A-201ENST00000347519 ACTG2P63267 376 aa16.51■□□□□ 0.23
CHMP4A-201ENST00000347519 MED22Q15528 200 aa16.51■□□□□ 0.23
CHMP4A-201ENST00000347519 UBE2UQ5VVX9 321 aa16.51■□□□□ 0.23
CHMP4A-201ENST00000347519 TMPRSS11AQ6ZMR5 421 aa16.51■□□□□ 0.23
CHMP4A-201ENST00000347519 DPPA2Q7Z7J5 298 aa16.51■□□□□ 0.23
CHMP4A-201ENST00000347519 NAA40Q86UY6 237 aa16.51■□□□□ 0.23
CHMP4A-201ENST00000347519 ZFP41Q8N8Y5 198 aa16.51■□□□□ 0.23
CHMP4A-201ENST00000347519 HSD17B8Q92506 261 aa16.51■□□□□ 0.23
CHMP4A-201ENST00000347519 HDHD2Q9H0R4 259 aa16.51■□□□□ 0.23
CHMP4A-201ENST00000347519 NPDC1Q9NQX5 325 aaPredicted RBP16.51■□□□□ 0.23
CHMP4A-201ENST00000347519 C5orf63A6NC05 138 aa16.51■□□□□ 0.23
CHMP4A-201ENST00000347519 PNPP00491 289 aa16.51■□□□□ 0.23
CHMP4A-201ENST00000347519 MT-ND5P03915 603 aa16.51■□□□□ 0.23
CHMP4A-201ENST00000347519 TFAP2AP05549 437 aa16.51■□□□□ 0.23
CHMP4A-201ENST00000347519 HOXC12P31275 282 aa16.51■□□□□ 0.23
CHMP4A-201ENST00000347519 IDH3GP51553 393 aaPredicted RBP16.51■□□□□ 0.23
CHMP4A-201ENST00000347519 RIDAP52758 137 aaKnown RBP16.51■□□□□ 0.23
CHMP4A-201ENST00000347519 MFGE8Q08431 387 aaPredicted RBP16.51■□□□□ 0.23
CHMP4A-201ENST00000347519 SPHARQ15513 63 aa16.51■□□□□ 0.23
CHMP4A-201ENST00000347519 TAF13Q15543 124 aa16.51■□□□□ 0.23
CHMP4A-201ENST00000347519 ALKBH2Q6NS38 261 aa16.51■□□□□ 0.23
CHMP4A-201ENST00000347519 DEGS2Q6QHC5 323 aa16.51■□□□□ 0.23
CHMP4A-201ENST00000347519 RORBQ92753 470 aa16.51■□□□□ 0.23
CHMP4A-201ENST00000347519 MUL1Q969V5 352 aa16.51■□□□□ 0.23
CHMP4A-201ENST00000347519 PPP1R14AQ96A00 147 aa16.51■□□□□ 0.23
CHMP4A-201ENST00000347519 WFIKKN1Q96NZ8 548 aa16.51■□□□□ 0.23
CHMP4A-201ENST00000347519 COQ7Q99807 217 aa16.51■□□□□ 0.23
CHMP4A-201ENST00000347519 MROQ9BYG7 248 aa16.51■□□□□ 0.23
CHMP4A-201ENST00000347519 OBP2BQ9NPH6 170 aa16.51■□□□□ 0.23
CHMP4A-201ENST00000347519 BABAM2Q9NXR7 383 aa16.51■□□□□ 0.23
CHMP4A-201ENST00000347519 ZNF254O75437 659 aa16.5■□□□□ 0.23
CHMP4A-201ENST00000347519 IGKV3-15P01624 115 aa16.5■□□□□ 0.23
CHMP4A-201ENST00000347519 SERPINA5P05154 406 aa16.5■□□□□ 0.23
CHMP4A-201ENST00000347519 JUNBP17275 347 aaPredicted RBP16.5■□□□□ 0.23
CHMP4A-201ENST00000347519 GP2P55259 537 aaKnown RBP16.5■□□□□ 0.23
CHMP4A-201ENST00000347519 NANOS3P60323 173 aaKnown RBP16.5■□□□□ 0.23
CHMP4A-201ENST00000347519 GALK2Q01415 458 aa16.5■□□□□ 0.23
CHMP4A-201ENST00000347519 PPA1Q15181 289 aa16.5■□□□□ 0.23
CHMP4A-201ENST00000347519 ZNF367Q7RTV3 350 aa16.5■□□□□ 0.23
CHMP4A-201ENST00000347519 P2RY8Q86VZ1 359 aa16.5■□□□□ 0.23
CHMP4A-201ENST00000347519 PAQR4Q8N4S7 273 aaPredicted RBP16.5■□□□□ 0.23
CHMP4A-201ENST00000347519 ZC3HAV1LQ96H79 300 aaKnown RBP16.5■□□□□ 0.23
CHMP4A-201ENST00000347519 POM121L2Q96KW2 1035 aa16.5■□□□□ 0.23
CHMP4A-201ENST00000347519 OPALINQ96PE5 141 aa16.5■□□□□ 0.23
CHMP4A-201ENST00000347519 KCNJ15Q99712 375 aa16.5■□□□□ 0.23
CHMP4A-201ENST00000347519 OR10A4Q9H209 315 aa16.5■□□□□ 0.23
CHMP4A-201ENST00000347519 CRNNQ9UBG3 495 aaPredicted RBP16.5■□□□□ 0.23
CHMP4A-201ENST00000347519 ST6GALNAC2Q9UJ37 374 aa16.5■□□□□ 0.23
CHMP4A-201ENST00000347519 IGHV1-18A0A0C4DH31 117 aa16.49■□□□□ 0.23
CHMP4A-201ENST00000347519 WIPF3A6NGB9 483 aa16.49■□□□□ 0.23
CHMP4A-201ENST00000347519 F5H5K5 113 aa16.49■□□□□ 0.23
CHMP4A-201ENST00000347519 CLPTM1O96005 669 aa16.49■□□□□ 0.23
CHMP4A-201ENST00000347519 IGLV1-44P01699 117 aa16.49■□□□□ 0.23
CHMP4A-201ENST00000347519 SLC2A1P11166 492 aa16.49■□□□□ 0.23
CHMP4A-201ENST00000347519 STOMP27105 288 aa16.49■□□□□ 0.23
CHMP4A-201ENST00000347519 OTX1P32242 354 aaPredicted RBP16.49■□□□□ 0.23
CHMP4A-201ENST00000347519 ZNF83P51522 516 aa16.49■□□□□ 0.23
CHMP4A-201ENST00000347519 GRB2P62993 217 aaKnown RBP16.49■□□□□ 0.23
CHMP4A-201ENST00000347519 RHOUQ7L0Q8 258 aa16.49■□□□□ 0.23
CHMP4A-201ENST00000347519 FAM220AQ7Z4H9 259 aa16.49■□□□□ 0.23
CHMP4A-201ENST00000347519 KCTD20Q7Z5Y7 419 aa16.49■□□□□ 0.23
CHMP4A-201ENST00000347519 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.49■□□□□ 0.23
CHMP4A-201ENST00000347519 LINC01560Q8TB33 94 aa16.49■□□□□ 0.23
CHMP4A-201ENST00000347519 TMIGD2Q96BF3 282 aa16.49■□□□□ 0.23
CHMP4A-201ENST00000347519 MRPL48Q96GC5 212 aaKnown RBP16.49■□□□□ 0.23
CHMP4A-201ENST00000347519 UBR5O95071 2799 aaPredicted RBP16.48■□□□□ 0.23
CHMP4A-201ENST00000347519 PNMA8CA0A1B0GUJ8 204 aa16.48■□□□□ 0.23
CHMP4A-201ENST00000347519 IQCMA0A1B0GVH7 501 aa16.48■□□□□ 0.23
CHMP4A-201ENST00000347519 C19orf84I3L1E1 186 aa16.48■□□□□ 0.23
CHMP4A-201ENST00000347519 TACSTD2P09758 323 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms