RNA–Protein interactions for RNA: ENST00000346416.6

CDK5RAP1-202, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP1, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-202ENST00000346416 PARD6AQ9NPB6 346 aa12.49□□□□□ -0.41
CDK5RAP1-202ENST00000346416 MRPS18CQ9Y3D5 142 aaKnown RBP12.49□□□□□ -0.41
CDK5RAP1-202ENST00000346416 SULT1B1O43704 296 aa12.49□□□□□ -0.41
CDK5RAP1-202ENST00000346416 ORC5O43913 435 aa12.49□□□□□ -0.41
CDK5RAP1-202ENST00000346416 GUCA1AP43080 201 aaPredicted RBP12.49□□□□□ -0.41
CDK5RAP1-202ENST00000346416 POU3F4P49335 361 aa12.49□□□□□ -0.41
CDK5RAP1-202ENST00000346416 PRKXP51817 358 aa12.49□□□□□ -0.41
CDK5RAP1-202ENST00000346416 SUCLG1P53597 346 aaKnown RBP12.49□□□□□ -0.41
CDK5RAP1-202ENST00000346416 PSMA6P60900 246 aaKnown RBP12.49□□□□□ -0.41
CDK5RAP1-202ENST00000346416 TAF13Q15543 124 aa12.49□□□□□ -0.41
CDK5RAP1-202ENST00000346416 GLT8D1Q68CQ7 371 aa12.49□□□□□ -0.41
CDK5RAP1-202ENST00000346416 FAM166AQ6J272 317 aa12.49□□□□□ -0.41
CDK5RAP1-202ENST00000346416 PIP4P1Q86T03 277 aa12.49□□□□□ -0.41
CDK5RAP1-202ENST00000346416 LUZP2Q86TE4 346 aa12.49□□□□□ -0.41
CDK5RAP1-202ENST00000346416 IL22RA1Q8N6P7 574 aa12.49□□□□□ -0.41
CDK5RAP1-202ENST00000346416 FAM3DQ96BQ1 224 aa12.49□□□□□ -0.41
CDK5RAP1-202ENST00000346416 ZNF775Q96BV0 537 aaPredicted RBP12.49□□□□□ -0.41
CDK5RAP1-202ENST00000346416 SF3B5Q9BWJ5 86 aaKnown RBP12.49□□□□□ -0.41
CDK5RAP1-202ENST00000346416 FAM117AQ9C073 453 aa12.49□□□□□ -0.41
CDK5RAP1-202ENST00000346416 NIPAL2Q9H841 368 aa12.49□□□□□ -0.41
CDK5RAP1-202ENST00000346416 PNRC2Q9NPJ4 139 aaKnown RBP12.49□□□□□ -0.41
CDK5RAP1-202ENST00000346416 CDV3Q9UKY7 258 aaKnown RBP12.49□□□□□ -0.41
CDK5RAP1-202ENST00000346416 BOKQ9UMX3 212 aaPredicted RBP12.49□□□□□ -0.41
CDK5RAP1-202ENST00000346416 INMT-MINDY4F8WBC2 141 aa12.48□□□□□ -0.41
CDK5RAP1-202ENST00000346416 GABARAPH6UMI1 98 aa12.48□□□□□ -0.41
CDK5RAP1-202ENST00000346416 PTHLHP12272 177 aa12.48□□□□□ -0.41
CDK5RAP1-202ENST00000346416 CASRP41180 1078 aa12.48□□□□□ -0.41
CDK5RAP1-202ENST00000346416 ZNF133P52736 654 aaPredicted RBP12.48□□□□□ -0.41
CDK5RAP1-202ENST00000346416 EFNB2P52799 333 aa12.48□□□□□ -0.41
CDK5RAP1-202ENST00000346416 RAB25P57735 213 aa12.48□□□□□ -0.41
CDK5RAP1-202ENST00000346416 LSM6P62312 80 aaKnown RBP12.48□□□□□ -0.41
CDK5RAP1-202ENST00000346416 SPOCK1Q08629 439 aa12.48□□□□□ -0.41
CDK5RAP1-202ENST00000346416 KLF9Q13886 244 aaPredicted RBP12.48□□□□□ -0.41
CDK5RAP1-202ENST00000346416 CSRP2Q16527 193 aa12.48□□□□□ -0.41
CDK5RAP1-202ENST00000346416 C2orf76Q3KRA6 126 aa12.48□□□□□ -0.41
CDK5RAP1-202ENST00000346416 OR52I2Q8NH67 350 aa12.48□□□□□ -0.41
CDK5RAP1-202ENST00000346416 NKD1Q969G9 470 aa12.48□□□□□ -0.41
CDK5RAP1-202ENST00000346416 UTP23Q9BRU9 249 aaKnown RBP12.48□□□□□ -0.41
CDK5RAP1-202ENST00000346416 OR2B2Q9GZK3 357 aa12.48□□□□□ -0.41
CDK5RAP1-202ENST00000346416 ZNF275Q9NSD4 429 aaPredicted RBP12.48□□□□□ -0.41
CDK5RAP1-202ENST00000346416 NUFIP1Q9UHK0 495 aaKnown RBP12.48□□□□□ -0.41
CDK5RAP1-202ENST00000346416 FOXD3Q9UJU5 478 aaPredicted RBP12.48□□□□□ -0.41
CDK5RAP1-202ENST00000346416 N6AMT1Q9Y5N5 214 aa12.48□□□□□ -0.41
CDK5RAP1-202ENST00000346416 ALG5Q9Y673 324 aa12.48□□□□□ -0.41
CDK5RAP1-202ENST00000346416 DCDC2BA2VCK2 349 aa12.47□□□□□ -0.41
CDK5RAP1-202ENST00000346416 MEGF11A6BM72 1044 aa12.47□□□□□ -0.41
CDK5RAP1-202ENST00000346416 SYT7O43581 403 aa12.47□□□□□ -0.41
CDK5RAP1-202ENST00000346416 CXCL13O43927 109 aa12.47□□□□□ -0.41
CDK5RAP1-202ENST00000346416 POU3F2P20265 443 aaPredicted RBP12.47□□□□□ -0.41
CDK5RAP1-202ENST00000346416 MSR1P21757 451 aa12.47□□□□□ -0.41
CDK5RAP1-202ENST00000346416 HLA-DMAP28067 261 aa12.47□□□□□ -0.41
CDK5RAP1-202ENST00000346416 TAS2R20P59543 309 aa12.47□□□□□ -0.41
CDK5RAP1-202ENST00000346416 AIMP2Q13155 320 aaKnown RBP12.47□□□□□ -0.41
CDK5RAP1-202ENST00000346416 TBRG1Q3YBR2 411 aa12.47□□□□□ -0.41
CDK5RAP1-202ENST00000346416 GLYATL3Q5SZD4 288 aa12.47□□□□□ -0.41
CDK5RAP1-202ENST00000346416 GLRX5Q86SX6 157 aa12.47□□□□□ -0.41
CDK5RAP1-202ENST00000346416 OR2M7Q8NG81 312 aa12.47□□□□□ -0.41
CDK5RAP1-202ENST00000346416 OR10D3Q8NH80 312 aa12.47□□□□□ -0.41
CDK5RAP1-202ENST00000346416 FCAMRQ8WWV6 532 aa12.47□□□□□ -0.41
CDK5RAP1-202ENST00000346416 SLC7A6Q92536 515 aa12.47□□□□□ -0.41
CDK5RAP1-202ENST00000346416 FGGYQ96C11 551 aa12.47□□□□□ -0.41
CDK5RAP1-202ENST00000346416 ST6GAL2Q96JF0 529 aa12.47□□□□□ -0.41
CDK5RAP1-202ENST00000346416 ADGRG7Q96K78 797 aa12.47□□□□□ -0.41
CDK5RAP1-202ENST00000346416 FAM173AQ9BQD7 235 aa12.47□□□□□ -0.41
CDK5RAP1-202ENST00000346416 RBM24Q9BX46 236 aaKnown RBP12.47□□□□□ -0.41
CDK5RAP1-202ENST00000346416 NELFAQ9H3P2 528 aa12.47□□□□□ -0.41
CDK5RAP1-202ENST00000346416 KCNK15Q9H427 330 aa12.47□□□□□ -0.41
CDK5RAP1-202ENST00000346416 PLEKHA1Q9HB21 404 aa12.47□□□□□ -0.41
CDK5RAP1-202ENST00000346416 NEK6Q9HC98 313 aa12.47□□□□□ -0.41
CDK5RAP1-202ENST00000346416 ABI3Q9P2A4 366 aa12.47□□□□□ -0.41
CDK5RAP1-202ENST00000346416 CGGBP1Q9UFW8 167 aaPredicted RBP12.47□□□□□ -0.41
CDK5RAP1-202ENST00000346416 POU2F3Q9UKI9 436 aa12.47□□□□□ -0.41
CDK5RAP1-202ENST00000346416 RTTNQ86VV8 2226 aa12.47□□□□□ -0.41
CDK5RAP1-202ENST00000346416 LOC100289279A0A1B0GTE1 492 aa12.47□□□□□ -0.41
CDK5RAP1-202ENST00000346416 A8MV72 311 aaPredicted RBP12.47□□□□□ -0.41
CDK5RAP1-202ENST00000346416 DHHO43323 396 aa12.47□□□□□ -0.41
CDK5RAP1-202ENST00000346416 CD37P11049 281 aa12.47□□□□□ -0.41
CDK5RAP1-202ENST00000346416 SLC2A1P11166 492 aa12.47□□□□□ -0.41
CDK5RAP1-202ENST00000346416 HTR2CP28335 458 aa12.47□□□□□ -0.41
CDK5RAP1-202ENST00000346416 RFC3P40938 356 aa12.47□□□□□ -0.41
CDK5RAP1-202ENST00000346416 MNDAP41218 407 aa12.47□□□□□ -0.41
CDK5RAP1-202ENST00000346416 GFRA1P56159 465 aa12.47□□□□□ -0.41
CDK5RAP1-202ENST00000346416 CLDN15P56746 228 aa12.47□□□□□ -0.41
CDK5RAP1-202ENST00000346416 SNTB2Q13425 540 aaKnown RBP12.47□□□□□ -0.41
CDK5RAP1-202ENST00000346416 DYRK1AQ13627 763 aa12.47□□□□□ -0.41
CDK5RAP1-202ENST00000346416 OR1C1Q15619 314 aa12.47□□□□□ -0.41
CDK5RAP1-202ENST00000346416 ATAD3CQ5T2N8 411 aa12.47□□□□□ -0.41
CDK5RAP1-202ENST00000346416 ANKRD16Q6P6B7 361 aa12.47□□□□□ -0.41
CDK5RAP1-202ENST00000346416 LINC00696Q6ZRV3 163 aa12.47□□□□□ -0.41
CDK5RAP1-202ENST00000346416 OR2V1Q8NHB1 315 aa12.47□□□□□ -0.41
CDK5RAP1-202ENST00000346416 OR51E1Q8TCB6 317 aa12.47□□□□□ -0.41
CDK5RAP1-202ENST00000346416 ROBO4Q8WZ75 1007 aa12.47□□□□□ -0.41
CDK5RAP1-202ENST00000346416 SLC25A28Q96A46 364 aa12.47□□□□□ -0.41
CDK5RAP1-202ENST00000346416 PNPLA2Q96AD5 504 aa12.47□□□□□ -0.41
CDK5RAP1-202ENST00000346416 INTS12Q96CB8 462 aaKnown RBP12.47□□□□□ -0.41
CDK5RAP1-202ENST00000346416 IP6K3Q96PC2 410 aa12.47□□□□□ -0.41
CDK5RAP1-202ENST00000346416 HES7Q9BYE0 225 aa12.47□□□□□ -0.41
CDK5RAP1-202ENST00000346416 ULBP2Q9BZM5 246 aa12.47□□□□□ -0.41
CDK5RAP1-202ENST00000346416 DPAGT1Q9H3H5 408 aa12.47□□□□□ -0.41
CDK5RAP1-202ENST00000346416 MOB1AQ9H8S9 216 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms