RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 CLDN34H7C241 214 aa11.04□□□□□ -0.64
COL12A1-202ENST00000345356 HIST1H3AP68431 136 aa11.04□□□□□ -0.64
COL12A1-202ENST00000345356 SLC17A1Q14916 467 aa11.04□□□□□ -0.64
COL12A1-202ENST00000345356 ABHD17CQ6PCB6 329 aa11.04□□□□□ -0.64
COL12A1-202ENST00000345356 CD99L2Q8TCZ2 262 aa11.04□□□□□ -0.64
COL12A1-202ENST00000345356 FBXO17Q96EF6 278 aa11.04□□□□□ -0.64
COL12A1-202ENST00000345356 SLC35A4Q96G79 324 aa11.04□□□□□ -0.64
COL12A1-202ENST00000345356 TMEM202A6NGA9 273 aa11.03□□□□□ -0.64
COL12A1-202ENST00000345356 ANKRD30BLA7E2S9 258 aa11.03□□□□□ -0.64
COL12A1-202ENST00000345356 MPC2O95563 127 aa11.03□□□□□ -0.64
COL12A1-202ENST00000345356 IL2RGP31785 369 aa11.03□□□□□ -0.64
COL12A1-202ENST00000345356 RPS27P42677 84 aaKnown RBP11.03□□□□□ -0.64
COL12A1-202ENST00000345356 NPBWR1P48145 328 aa11.03□□□□□ -0.64
COL12A1-202ENST00000345356 CATR1Q13166 79 aa11.03□□□□□ -0.64
COL12A1-202ENST00000345356 FCRL6Q6DN72 434 aa11.03□□□□□ -0.64
COL12A1-202ENST00000345356 CNKSR3Q6P9H4 555 aa11.03□□□□□ -0.64
COL12A1-202ENST00000345356 SLC24A4Q8NFF2 622 aa11.03□□□□□ -0.64
COL12A1-202ENST00000345356 ARSGQ96EG1 525 aa11.03□□□□□ -0.64
COL12A1-202ENST00000345356 LYSMD1Q96S90 227 aa11.03□□□□□ -0.64
COL12A1-202ENST00000345356 IL20Q9NYY1 176 aa11.03□□□□□ -0.64
COL12A1-202ENST00000345356 AQP7O14520 342 aa11.03□□□□□ -0.64
COL12A1-202ENST00000345356 FCMRO60667 390 aa11.03□□□□□ -0.64
COL12A1-202ENST00000345356 ECH1Q13011 328 aa11.03□□□□□ -0.64
COL12A1-202ENST00000345356 TMEM183BQ1AE95 376 aa11.03□□□□□ -0.64
COL12A1-202ENST00000345356 MS4A10Q96PG2 267 aa11.03□□□□□ -0.64
COL12A1-202ENST00000345356 LYRM2Q9NU23 88 aaPredicted RBP11.03□□□□□ -0.64
COL12A1-202ENST00000345356 NWD2Q9ULI1 1742 aa11.03□□□□□ -0.64
COL12A1-202ENST00000345356 WSB1Q9Y6I7 421 aa11.03□□□□□ -0.64
COL12A1-202ENST00000345356 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.03□□□□□ -0.64
COL12A1-202ENST00000345356 LOC102725191A0A1B0GVB3 256 aa11.03□□□□□ -0.64
COL12A1-202ENST00000345356 GFYI3L273 518 aa11.03□□□□□ -0.64
COL12A1-202ENST00000345356 SLC2A1P11166 492 aa11.03□□□□□ -0.64
COL12A1-202ENST00000345356 PLAC9Q5JTB6 97 aa11.03□□□□□ -0.64
COL12A1-202ENST00000345356 DEFB119Q8N690 84 aa11.03□□□□□ -0.64
COL12A1-202ENST00000345356 MTFP1Q9UDX5 166 aa11.03□□□□□ -0.64
COL12A1-202ENST00000345356 COA3Q9Y2R0 106 aaPredicted RBP11.03□□□□□ -0.64
COL12A1-202ENST00000345356 MMP7P09237 267 aaPredicted RBP11.03□□□□□ -0.64
COL12A1-202ENST00000345356 RAB38P57729 211 aa11.03□□□□□ -0.64
COL12A1-202ENST00000345356 ELAVL1Q15717 326 aaKnown RBP11.03□□□□□ -0.64
COL12A1-202ENST00000345356 OR2B11Q5JQS5 317 aa11.03□□□□□ -0.64
COL12A1-202ENST00000345356 SLC6A18Q96N87 628 aa11.03□□□□□ -0.64
COL12A1-202ENST00000345356 JAM3Q9BX67 310 aa11.03□□□□□ -0.64
COL12A1-202ENST00000345356 BCL2L10Q9HD36 194 aa11.03□□□□□ -0.64
COL12A1-202ENST00000345356 SLC2A4RGQ9NR83 387 aa11.03□□□□□ -0.64
COL12A1-202ENST00000345356 A4GNTQ9UNA3 340 aa11.03□□□□□ -0.64
COL12A1-202ENST00000345356 TRAV34A0A0B4J273 112 aa11.02□□□□□ -0.64
COL12A1-202ENST00000345356 ADAMTS4O75173 837 aa11.02□□□□□ -0.64
COL12A1-202ENST00000345356 EEF1A1P68104 462 aaKnown RBP11.02□□□□□ -0.64
COL12A1-202ENST00000345356 CSNK1G2P78368 415 aa11.02□□□□□ -0.64
COL12A1-202ENST00000345356 CDK5Q00535 292 aa11.02□□□□□ -0.64
COL12A1-202ENST00000345356 EEF1A2Q05639 463 aaKnown RBP11.02□□□□□ -0.64
COL12A1-202ENST00000345356 PPP1R1AQ13522 171 aa11.02□□□□□ -0.64
COL12A1-202ENST00000345356 TMEM201Q5SNT2 666 aa11.02□□□□□ -0.64
COL12A1-202ENST00000345356 TMEM268Q5VZI3 342 aa11.02□□□□□ -0.64
COL12A1-202ENST00000345356 C8orf82Q6P1X6 216 aaPredicted RBP11.02□□□□□ -0.64
COL12A1-202ENST00000345356 MARCH3Q86UD3 253 aa11.02□□□□□ -0.64
COL12A1-202ENST00000345356 ADAT1Q9BUB4 502 aaKnown RBP11.02□□□□□ -0.64
COL12A1-202ENST00000345356 KLF15Q9UIH9 416 aa11.02□□□□□ -0.64
COL12A1-202ENST00000345356 SLC22A13Q9Y226 551 aa11.02□□□□□ -0.64
COL12A1-202ENST00000345356 COL2A1P02458 1487 aaPredicted RBP11.02□□□□□ -0.64
COL12A1-202ENST00000345356 IGHA2P01877 340 aa11.02□□□□□ -0.64
COL12A1-202ENST00000345356 PRPH2P23942 346 aa11.02□□□□□ -0.64
COL12A1-202ENST00000345356 ZNF85Q03923 595 aa11.02□□□□□ -0.64
COL12A1-202ENST00000345356 ACOT6Q3I5F7 207 aaPredicted RBP11.02□□□□□ -0.64
COL12A1-202ENST00000345356 EOGTQ5NDL2 527 aa11.02□□□□□ -0.64
COL12A1-202ENST00000345356 SDF2Q99470 211 aa11.02□□□□□ -0.64
COL12A1-202ENST00000345356 CLCF1Q9UBD9 225 aa11.02□□□□□ -0.64
COL12A1-202ENST00000345356 RNF150Q9ULK6 438 aa11.02□□□□□ -0.64
COL12A1-202ENST00000345356 FAM74A7A6NL05 159 aa11.02□□□□□ -0.65
COL12A1-202ENST00000345356 PPIAP62937 165 aaKnown RBP11.02□□□□□ -0.65
COL12A1-202ENST00000345356 MFAP5Q13361 173 aa11.02□□□□□ -0.65
COL12A1-202ENST00000345356 FAM74A3Q4VXF1 159 aa11.02□□□□□ -0.65
COL12A1-202ENST00000345356 DMBX1Q8NFW5 382 aa11.02□□□□□ -0.65
COL12A1-202ENST00000345356 IL17BQ9UHF5 180 aa11.02□□□□□ -0.65
COL12A1-202ENST00000345356 TRAPPC1Q9Y5R8 145 aa11.02□□□□□ -0.65
COL12A1-202ENST00000345356 MICAL3Q7RTP6 2002 aa11.02□□□□□ -0.65
COL12A1-202ENST00000345356 H0YGG7 62 aa11.02□□□□□ -0.65
COL12A1-202ENST00000345356 PLPP2O43688 288 aa11.02□□□□□ -0.65
COL12A1-202ENST00000345356 BCL6P41182 706 aa11.02□□□□□ -0.65
COL12A1-202ENST00000345356 BIDP55957 195 aa11.02□□□□□ -0.65
COL12A1-202ENST00000345356 ZNF684Q5T5D7 378 aa11.02□□□□□ -0.65
COL12A1-202ENST00000345356 SPACA5Q96QH8 159 aa11.02□□□□□ -0.65
COL12A1-202ENST00000345356 LPAR4Q99677 370 aa11.02□□□□□ -0.65
COL12A1-202ENST00000345356 PRRX2Q99811 253 aa11.02□□□□□ -0.65
COL12A1-202ENST00000345356 MAGT1Q9H0U3 335 aa11.02□□□□□ -0.65
COL12A1-202ENST00000345356 MTCH1Q9NZJ7 389 aa11.02□□□□□ -0.65
COL12A1-202ENST00000345356 TRAPPC2LQ9UL33 140 aa11.02□□□□□ -0.65
COL12A1-202ENST00000345356 INPP5JQ15735 1006 aaPredicted RBP11.02□□□□□ -0.65
COL12A1-202ENST00000345356 OR51H1Q8NH63 302 aa11.02□□□□□ -0.65
COL12A1-202ENST00000345356 CTSFQ9UBX1 484 aa11.02□□□□□ -0.65
COL12A1-202ENST00000345356 OPN4Q9UHM6 478 aa11.02□□□□□ -0.65
COL12A1-202ENST00000345356 ANKRD20A5PA0PJZ0 165 aa11.01□□□□□ -0.65
COL12A1-202ENST00000345356 C7orf77A4D0Y5 90 aa11.01□□□□□ -0.65
COL12A1-202ENST00000345356 TMPRSS11DO60235 418 aa11.01□□□□□ -0.65
COL12A1-202ENST00000345356 ZIC2O95409 532 aaPredicted RBP11.01□□□□□ -0.65
COL12A1-202ENST00000345356 CD79AP11912 226 aa11.01□□□□□ -0.65
COL12A1-202ENST00000345356 CSF2RAP15509 400 aa11.01□□□□□ -0.65
COL12A1-202ENST00000345356 GABREP78334 506 aa11.01□□□□□ -0.65
COL12A1-202ENST00000345356 APOOQ9BUR5 198 aa11.01□□□□□ -0.65
COL12A1-202ENST00000345356 ULBP2Q9BZM5 246 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms