RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 IL31RAQ8NI17 732 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 GBA2Q9HCG7 927 aaPredicted RBP3.45□□□□□ -1.86
SYNE2-202ENST00000344113 PNPOQ9NVS9 261 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 MARCH4Q9P2E8 410 aaPredicted RBP3.45□□□□□ -1.86
SYNE2-202ENST00000344113 ZNF195O14628 629 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 VPREB1P12018 145 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 SOX2P48431 317 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 MFAP4P55083 255 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 ZNF774Q6NX45 483 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 CLEC14AQ86T13 490 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 ZBTB34Q8NCN2 500 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 RAET1EQ8TD07 263 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 FIZ1Q96SL8 496 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 MYH8P13535 1937 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 PHRF1Q9P1Y6 1649 aaKnown RBP3.45□□□□□ -1.86
SYNE2-202ENST00000344113 PIRO00625 290 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 ADH4P08319 380 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 CT45A6P0DMU7 189 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 CT45A5P0DMU8 189 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 CT45A7P0DMV0 189 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 MGST1P10620 155 aaKnown RBP3.45□□□□□ -1.86
SYNE2-202ENST00000344113 UNGP13051 313 aaPredicted RBP3.45□□□□□ -1.86
SYNE2-202ENST00000344113 CRISP2P16562 243 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 OAZ1P54368 228 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 PLA1AQ53H76 456 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 CT45A1Q5HYN5 189 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 LINC01551Q86U37 167 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 CT45A3Q8NHU0 189 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 CST3P01034 146 aaPredicted RBP3.45□□□□□ -1.86
SYNE2-202ENST00000344113 ATP1B3P54709 279 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 TMEM236Q5W0B7 351 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 ZNF101Q8IZC7 436 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 C14orf144Q96I85 54 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 OR2D2Q9H210 308 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 COX11Q9Y6N1 276 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 MED13LQ71F56 2210 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 TRBV24-1A0A075B6N3 115 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 ZC3H12DA2A288 527 aaKnown RBP3.45□□□□□ -1.86
SYNE2-202ENST00000344113 ESDP10768 282 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 ZNF250P15622 560 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 HHIPL2Q6UWX4 724 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 PPP1R27Q86WC6 154 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 MAGT1Q9H0U3 335 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 FAM208BQ5VWN6 2430 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 FIGNL2A6NMB9 653 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 CXCL11O14625 94 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 DBHP09172 617 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 JAG1P78504 1218 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 MELKQ14680 651 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 PRAMEF5Q5TYX0 476 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 PRAMEF6Q5VXH4 476 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 OR2W3Q7Z3T1 314 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 LRRTM1Q86UE6 522 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 FAM129CQ86XR2 697 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 LANCL2Q9NS86 450 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 HIF1ANQ9NWT6 349 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 SMPXQ9UHP9 88 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 ATRNL1Q5VV63 1379 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 GSG1L2A8MUP6 293 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 J3KR12 359 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 LTFP02788 710 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 SOD3P08294 240 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 COX5BP10606 129 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 PLGLB1Q02325 96 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 PCLAFQ15004 111 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 TMEM268Q5VZI3 342 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 ACSM5Q6NUN0 579 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 TXNRD3Q86VQ6 643 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 FAM213BQ8TBF2 198 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 NTNG2Q96CW9 530 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 AKR1E2Q96JD6 320 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 CDX2Q99626 313 aaPredicted RBP3.45□□□□□ -1.86
SYNE2-202ENST00000344113 ARFGEF3Q5TH69 2177 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 TULP4Q9NRJ4 1543 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 JCHAINP01591 159 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 HRH2P25021 359 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 KDELR2P33947 212 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 PTGER3P43115 390 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 PIGZQ86VD9 579 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 PELI3Q8N2H9 469 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 CD200R1Q8TD46 325 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 GSTO2Q9H4Y5 243 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 OR6C3Q9NZP0 311 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 FCF1Q9Y324 198 aaKnown RBP3.45□□□□□ -1.86
SYNE2-202ENST00000344113 TNS3Q68CZ2 1445 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 DNASE2O00115 360 aaPredicted RBP3.45□□□□□ -1.86
SYNE2-202ENST00000344113 ASGR2P07307 311 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 CRYGCP07315 174 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 CASP9P55211 416 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 BEX5Q5H9J7 111 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 ASCL4Q6XD76 172 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 RNF44Q7L0R7 432 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 OR11L1Q8NGX0 322 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 EPHX3Q9H6B9 360 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 KCNE5Q9UJ90 142 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 MYH14Q7Z406 1995 aaKnown RBP3.45□□□□□ -1.86
SYNE2-202ENST00000344113 A0A1B0GTW7 788 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP3.45□□□□□ -1.86
SYNE2-202ENST00000344113 ACKR2O00590 384 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 NME2P1O60361 137 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms