RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 MTSS1LQ765P7 747 aa7.34□□□□□ -1.23
ATG4A-201ENST00000343524 KCTD9Q7L273 389 aa7.34□□□□□ -1.23
ATG4A-201ENST00000343524 SUMF2Q8NBJ7 301 aa7.34□□□□□ -1.23
ATG4A-201ENST00000343524 KREMEN2Q8NCW0 462 aa7.34□□□□□ -1.23
ATG4A-201ENST00000343524 OR8G5Q8NG78 346 aa7.34□□□□□ -1.23
ATG4A-201ENST00000343524 OR9A2Q8NGT5 310 aa7.34□□□□□ -1.23
ATG4A-201ENST00000343524 OR2L8Q8NGY9 312 aa7.34□□□□□ -1.23
ATG4A-201ENST00000343524 OR8U1Q8NH10 309 aa7.34□□□□□ -1.23
ATG4A-201ENST00000343524 OR10J5Q8NHC4 309 aa7.34□□□□□ -1.23
ATG4A-201ENST00000343524 DTD1Q8TEA8 209 aa7.34□□□□□ -1.23
ATG4A-201ENST00000343524 HPSE2Q8WWQ2 592 aa7.34□□□□□ -1.23
ATG4A-201ENST00000343524 METTL21AQ8WXB1 218 aa7.34□□□□□ -1.23
ATG4A-201ENST00000343524 KLK6Q92876 244 aa7.34□□□□□ -1.23
ATG4A-201ENST00000343524 SMARCD2Q92925 531 aa7.34□□□□□ -1.23
ATG4A-201ENST00000343524 MR1Q95460 341 aa7.34□□□□□ -1.23
ATG4A-201ENST00000343524 BPIFA2Q96DR5 249 aa7.34□□□□□ -1.23
ATG4A-201ENST00000343524 SEH1LQ96EE3 360 aa7.34□□□□□ -1.23
ATG4A-201ENST00000343524 SCGB3A2Q96PL1 93 aa7.34□□□□□ -1.23
ATG4A-201ENST00000343524 OR7D2Q96RA2 312 aa7.34□□□□□ -1.23
ATG4A-201ENST00000343524 ZNF587Q96SQ5 575 aaPredicted RBP7.34□□□□□ -1.23
ATG4A-201ENST00000343524 AIF1LQ9BQI0 150 aa7.34□□□□□ -1.23
ATG4A-201ENST00000343524 RAB33BQ9H082 229 aa7.34□□□□□ -1.23
ATG4A-201ENST00000343524 SLC25A31Q9H0C2 315 aa7.34□□□□□ -1.23
ATG4A-201ENST00000343524 CST11Q9H112 138 aa7.34□□□□□ -1.23
ATG4A-201ENST00000343524 ZDHHC4Q9NPG8 344 aa7.34□□□□□ -1.23
ATG4A-201ENST00000343524 CLDND1Q9NY35 253 aa7.34□□□□□ -1.23
ATG4A-201ENST00000343524 TCFL5Q9UL49 500 aa7.34□□□□□ -1.23
ATG4A-201ENST00000343524 VSIG4Q9Y279 399 aa7.34□□□□□ -1.23
ATG4A-201ENST00000343524 MMACHCQ9Y4U1 282 aa7.34□□□□□ -1.23
ATG4A-201ENST00000343524 NCOR2Q9Y618 2525 aa7.34□□□□□ -1.23
ATG4A-201ENST00000343524 NINQ8N4C6 2090 aa7.33□□□□□ -1.24
ATG4A-201ENST00000343524 RIF1Q5UIP0 2472 aaKnown RBP7.33□□□□□ -1.24
ATG4A-201ENST00000343524 A0A087WZY1 265 aa7.33□□□□□ -1.24
ATG4A-201ENST00000343524 TRBV5-7A0A0A0MS05 114 aa7.33□□□□□ -1.24
ATG4A-201ENST00000343524 TMEM210A6NLX4 147 aa7.33□□□□□ -1.24
ATG4A-201ENST00000343524 B4DEV8 164 aa7.33□□□□□ -1.24
ATG4A-201ENST00000343524 M0QYG6 137 aa7.33□□□□□ -1.24
ATG4A-201ENST00000343524 PHOX2AO14813 284 aa7.33□□□□□ -1.24
ATG4A-201ENST00000343524 NDUFS4O43181 175 aa7.33□□□□□ -1.24
ATG4A-201ENST00000343524 STK17BO94768 372 aa7.33□□□□□ -1.24
ATG4A-201ENST00000343524 ABLIM3O94929 683 aa7.33□□□□□ -1.24
ATG4A-201ENST00000343524 SOD3P08294 240 aa7.33□□□□□ -1.24
ATG4A-201ENST00000343524 SEC11BP0C7V7 166 aa7.33□□□□□ -1.24
ATG4A-201ENST00000343524 CD37P11049 281 aa7.33□□□□□ -1.24
ATG4A-201ENST00000343524 CKBP12277 381 aa7.33□□□□□ -1.24
ATG4A-201ENST00000343524 ADRA2CP18825 462 aa7.33□□□□□ -1.24
ATG4A-201ENST00000343524 MAKP20794 623 aa7.33□□□□□ -1.24
ATG4A-201ENST00000343524 CORO1AP31146 461 aaKnown RBP7.33□□□□□ -1.24
ATG4A-201ENST00000343524 CD200P41217 278 aa7.33□□□□□ -1.24
ATG4A-201ENST00000343524 PRLHRP49683 370 aa7.33□□□□□ -1.24
ATG4A-201ENST00000343524 PRKAG1P54619 331 aa7.33□□□□□ -1.24
ATG4A-201ENST00000343524 MRPS6P82932 125 aaKnown RBP7.33□□□□□ -1.24
ATG4A-201ENST00000343524 RASGEF1BQ0VAM2 473 aa7.33□□□□□ -1.24
ATG4A-201ENST00000343524 TSTA3Q13630 321 aaPredicted RBP7.33□□□□□ -1.24
ATG4A-201ENST00000343524 MIDNQ504T8 468 aa7.33□□□□□ -1.24
ATG4A-201ENST00000343524 SOHLH1Q5JUK2 328 aa7.33□□□□□ -1.24
ATG4A-201ENST00000343524 YOD1Q5VVQ6 348 aaPredicted RBP7.33□□□□□ -1.24
ATG4A-201ENST00000343524 OR2T2Q6IF00 324 aa7.33□□□□□ -1.24
ATG4A-201ENST00000343524 UNQ6494/PRO21346Q6UXR6 183 aa7.33□□□□□ -1.24
ATG4A-201ENST00000343524 LANCL3Q6ZV70 420 aa7.33□□□□□ -1.24
ATG4A-201ENST00000343524 MDGA2Q7Z553 956 aa7.33□□□□□ -1.24
ATG4A-201ENST00000343524 ZNF595Q8IYB9 648 aa7.33□□□□□ -1.24
ATG4A-201ENST00000343524 C1orf87Q8N0U7 546 aa7.33□□□□□ -1.24
ATG4A-201ENST00000343524 RFLNBQ8N5W9 214 aa7.33□□□□□ -1.24
ATG4A-201ENST00000343524 ZNF615Q8N8J6 731 aa7.33□□□□□ -1.24
ATG4A-201ENST00000343524 PLPP5Q8NEB5 264 aa7.33□□□□□ -1.24
ATG4A-201ENST00000343524 OR13C2Q8NGS9 318 aa7.33□□□□□ -1.24
ATG4A-201ENST00000343524 OR9A1PQ8NGU1 263 aa7.33□□□□□ -1.24
ATG4A-201ENST00000343524 RGP1Q92546 391 aaPredicted RBP7.33□□□□□ -1.24
ATG4A-201ENST00000343524 TAAR8Q969N4 342 aa7.33□□□□□ -1.24
ATG4A-201ENST00000343524 CCDC74AQ96AQ1 378 aa7.33□□□□□ -1.24
ATG4A-201ENST00000343524 FAM3DQ96BQ1 224 aa7.33□□□□□ -1.24
ATG4A-201ENST00000343524 RAB39BQ96DA2 213 aa7.33□□□□□ -1.24
ATG4A-201ENST00000343524 ZMYND19Q96E35 227 aaPredicted RBP7.33□□□□□ -1.24
ATG4A-201ENST00000343524 OR2M4Q96R27 311 aa7.33□□□□□ -1.24
ATG4A-201ENST00000343524 C20orf24Q9BUV8 137 aa7.33□□□□□ -1.24
ATG4A-201ENST00000343524 RNF126Q9BV68 326 aa7.33□□□□□ -1.24
ATG4A-201ENST00000343524 NELFAQ9H3P2 528 aa7.33□□□□□ -1.24
ATG4A-201ENST00000343524 MTHFD2LQ9H903 347 aaPredicted RBP7.33□□□□□ -1.24
ATG4A-201ENST00000343524 CRLF2Q9HC73 371 aa7.33□□□□□ -1.24
ATG4A-201ENST00000343524 GPR55Q9Y2T6 319 aaPredicted RBP7.33□□□□□ -1.24
ATG4A-201ENST00000343524 ANAPC1Q9H1A4 1944 aa7.33□□□□□ -1.24
ATG4A-201ENST00000343524 ACACBO00763 2458 aa7.33□□□□□ -1.24
ATG4A-201ENST00000343524 NUP210LQ5VU65 1888 aa7.33□□□□□ -1.24
ATG4A-201ENST00000343524 BORCS7-ASMTA0A0B4J1R7 106 aa7.33□□□□□ -1.24
ATG4A-201ENST00000343524 MEIS3P1A6NDR6 274 aa7.33□□□□□ -1.24
ATG4A-201ENST00000343524 C1QTNF3-AMACRE9PGA6 284 aa7.33□□□□□ -1.24
ATG4A-201ENST00000343524 EREGO14944 169 aa7.33□□□□□ -1.24
ATG4A-201ENST00000343524 SMAD9O15198 467 aaKnown RBP7.33□□□□□ -1.24
ATG4A-201ENST00000343524 DOK2O60496 412 aa7.33□□□□□ -1.24
ATG4A-201ENST00000343524 ZNF354AO60765 605 aaPredicted RBP7.33□□□□□ -1.24
ATG4A-201ENST00000343524 GPANK1O95872 356 aa7.33□□□□□ -1.24
ATG4A-201ENST00000343524 THY1P04216 161 aa7.33□□□□□ -1.24
ATG4A-201ENST00000343524 DAOP14920 347 aa7.33□□□□□ -1.24
ATG4A-201ENST00000343524 RAB6AP20340 208 aa7.33□□□□□ -1.24
ATG4A-201ENST00000343524 PSMB10P40306 273 aa7.33□□□□□ -1.24
ATG4A-201ENST00000343524 NAA10P41227 235 aaPredicted RBP7.33□□□□□ -1.24
ATG4A-201ENST00000343524 KIR3DL2P43630 455 aa7.33□□□□□ -1.24
ATG4A-201ENST00000343524 SGSHP51688 502 aa7.33□□□□□ -1.24
ATG4A-201ENST00000343524 TDGF1P3P51864 188 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms