RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 CTSFQ9UBX1 484 aa6.5□□□□□ -1.37
VCAN-202ENST00000342785 SLC5A6Q9Y289 635 aa6.5□□□□□ -1.37
VCAN-202ENST00000342785 ANKRD30BLA7E2S9 258 aa6.5□□□□□ -1.37
VCAN-202ENST00000342785 C2CD4DB7Z1M9 353 aa6.5□□□□□ -1.37
VCAN-202ENST00000342785 SDCBPO00560 298 aaPredicted RBP6.5□□□□□ -1.37
VCAN-202ENST00000342785 TBXA2RP21731 343 aa6.5□□□□□ -1.37
VCAN-202ENST00000342785 TUBG1P23258 451 aa6.5□□□□□ -1.37
VCAN-202ENST00000342785 CRYBA2P53672 197 aa6.5□□□□□ -1.37
VCAN-202ENST00000342785 GRB2P62993 217 aaKnown RBP6.5□□□□□ -1.37
VCAN-202ENST00000342785 FOXF1Q12946 379 aa6.5□□□□□ -1.37
VCAN-202ENST00000342785 TEX261Q6UWH6 196 aa6.5□□□□□ -1.37
VCAN-202ENST00000342785 VSTM2LQ96N03 204 aa6.5□□□□□ -1.37
VCAN-202ENST00000342785 ZNF649Q9BS31 505 aa6.5□□□□□ -1.37
VCAN-202ENST00000342785 U3KQ87 197 aa6.5□□□□□ -1.37
VCAN-202ENST00000342785 OR5H14A6NHG9 310 aa6.49□□□□□ -1.37
VCAN-202ENST00000342785 K7EQS6 105 aa6.49□□□□□ -1.37
VCAN-202ENST00000342785 SPINT1O43278 529 aa6.49□□□□□ -1.37
VCAN-202ENST00000342785 NDUFB6O95139 128 aa6.49□□□□□ -1.37
VCAN-202ENST00000342785 SNRNP70P08621 437 aaKnown RBP6.49□□□□□ -1.37
VCAN-202ENST00000342785 CD63P08962 238 aa6.49□□□□□ -1.37
VCAN-202ENST00000342785 ZNF728P0DKX0 622 aa6.49□□□□□ -1.37
VCAN-202ENST00000342785 GLB1P16278 677 aa6.49□□□□□ -1.37
VCAN-202ENST00000342785 M6PRP20645 277 aa6.49□□□□□ -1.37
VCAN-202ENST00000342785 CARD18P57730 90 aa6.49□□□□□ -1.37
VCAN-202ENST00000342785 AKR1C1Q04828 323 aa6.49□□□□□ -1.37
VCAN-202ENST00000342785 SRSF5Q13243 272 aaKnown RBP6.49□□□□□ -1.37
VCAN-202ENST00000342785 TRIM61Q5EBN2 209 aa6.49□□□□□ -1.37
VCAN-202ENST00000342785 C1QL3Q5VWW1 255 aa6.49□□□□□ -1.37
VCAN-202ENST00000342785 GRAMD2AQ8IUY3 354 aa6.49□□□□□ -1.37
VCAN-202ENST00000342785 TMEM52Q8NDY8 209 aa6.49□□□□□ -1.37
VCAN-202ENST00000342785 C1orf123Q9NWV4 160 aa6.49□□□□□ -1.37
VCAN-202ENST00000342785 MTFP1Q9UDX5 166 aa6.49□□□□□ -1.37
VCAN-202ENST00000342785 PCDHGA5Q9Y5G8 931 aa6.49□□□□□ -1.37
VCAN-202ENST00000342785 HRH3Q9Y5N1 445 aa6.49□□□□□ -1.37
VCAN-202ENST00000342785 DSPPQ9NZW4 1301 aa6.49□□□□□ -1.37
VCAN-202ENST00000342785 TRAPPC2LH3BP13 241 aa6.49□□□□□ -1.37
VCAN-202ENST00000342785 GUSBP08236 651 aa6.49□□□□□ -1.37
VCAN-202ENST00000342785 TGFBR3Q03167 851 aa6.49□□□□□ -1.37
VCAN-202ENST00000342785 SNTB1Q13884 538 aaKnown RBP6.49□□□□□ -1.37
VCAN-202ENST00000342785 GLDNQ6ZMI3 551 aaPredicted RBP6.49□□□□□ -1.37
VCAN-202ENST00000342785 CPEB2Q7Z5Q1 589 aaKnown RBP6.49□□□□□ -1.37
VCAN-202ENST00000342785 LIPHQ8WWY8 451 aa6.49□□□□□ -1.37
VCAN-202ENST00000342785 NANOS1Q8WY41 292 aaKnown RBP6.49□□□□□ -1.37
VCAN-202ENST00000342785 BOKQ9UMX3 212 aaPredicted RBP6.49□□□□□ -1.37
VCAN-202ENST00000342785 MEIKINA0A087WXM9 373 aa6.49□□□□□ -1.37
VCAN-202ENST00000342785 SULT1C2O00338 296 aa6.49□□□□□ -1.37
VCAN-202ENST00000342785 OR2F2O95006 317 aa6.49□□□□□ -1.37
VCAN-202ENST00000342785 IL5P05113 134 aa6.49□□□□□ -1.37
VCAN-202ENST00000342785 POU2F2P09086 479 aa6.49□□□□□ -1.37
VCAN-202ENST00000342785 ZGLP1P0C6A0 271 aa6.49□□□□□ -1.37
VCAN-202ENST00000342785 OMGP23515 440 aa6.49□□□□□ -1.37
VCAN-202ENST00000342785 OR2F1Q13607 317 aa6.49□□□□□ -1.37
VCAN-202ENST00000342785 CD226Q15762 336 aa6.49□□□□□ -1.37
VCAN-202ENST00000342785 SFTPA2Q8IWL1 248 aa6.49□□□□□ -1.37
VCAN-202ENST00000342785 LILRB2Q8N423 598 aa6.49□□□□□ -1.37
VCAN-202ENST00000342785 OR1N1Q8NGS0 311 aa6.49□□□□□ -1.37
VCAN-202ENST00000342785 TMED6Q8WW62 240 aa6.49□□□□□ -1.37
VCAN-202ENST00000342785 TTC9Q92623 222 aa6.49□□□□□ -1.37
VCAN-202ENST00000342785 MARC2Q969Z3 335 aa6.49□□□□□ -1.37
VCAN-202ENST00000342785 ANKRD9Q96BM1 317 aaPredicted RBP6.49□□□□□ -1.37
VCAN-202ENST00000342785 PIGQQ9BRB3 760 aa6.49□□□□□ -1.37
VCAN-202ENST00000342785 ZCCHC4Q9H5U6 513 aa6.49□□□□□ -1.37
VCAN-202ENST00000342785 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.49□□□□□ -1.37
VCAN-202ENST00000342785 PCOLCE2Q9UKZ9 415 aa6.49□□□□□ -1.37
VCAN-202ENST00000342785 SIRT4Q9Y6E7 314 aaPredicted RBP6.49□□□□□ -1.37
VCAN-202ENST00000342785 SGCEO43556 437 aa6.49□□□□□ -1.37
VCAN-202ENST00000342785 SCO1O75880 301 aa6.49□□□□□ -1.37
VCAN-202ENST00000342785 OR2J2O76002 312 aa6.49□□□□□ -1.37
VCAN-202ENST00000342785 ABHD16AO95870 558 aa6.49□□□□□ -1.37
VCAN-202ENST00000342785 APLNRP35414 380 aa6.49□□□□□ -1.37
VCAN-202ENST00000342785 FMODQ06828 376 aa6.49□□□□□ -1.37
VCAN-202ENST00000342785 THEM4Q5T1C6 240 aa6.49□□□□□ -1.37
VCAN-202ENST00000342785 ZNF684Q5T5D7 378 aa6.49□□□□□ -1.37
VCAN-202ENST00000342785 LANCL3Q6ZV70 420 aa6.49□□□□□ -1.37
VCAN-202ENST00000342785 RABEPKQ7Z6M1 372 aa6.49□□□□□ -1.37
VCAN-202ENST00000342785 NAXDQ8IW45 347 aa6.49□□□□□ -1.37
VCAN-202ENST00000342785 LSMEM1Q8N8F7 131 aa6.49□□□□□ -1.37
VCAN-202ENST00000342785 SECTM1Q8WVN6 248 aa6.49□□□□□ -1.37
VCAN-202ENST00000342785 C11orf40Q8WZ69 217 aa6.49□□□□□ -1.37
VCAN-202ENST00000342785 HINT2Q9BX68 163 aa6.49□□□□□ -1.37
VCAN-202ENST00000342785 TINAGL1Q9GZM7 467 aaPredicted RBP6.49□□□□□ -1.37
VCAN-202ENST00000342785 PIGLQ9Y2B2 252 aa6.49□□□□□ -1.37
VCAN-202ENST00000342785 ALG1L2C9J202 215 aa6.49□□□□□ -1.37
VCAN-202ENST00000342785 HRKO00198 91 aa6.49□□□□□ -1.37
VCAN-202ENST00000342785 RGS13O14921 159 aa6.49□□□□□ -1.37
VCAN-202ENST00000342785 GMDSO60547 372 aa6.49□□□□□ -1.37
VCAN-202ENST00000342785 IFNA1P01562 189 aa6.49□□□□□ -1.37
VCAN-202ENST00000342785 ERGP11308 486 aa6.49□□□□□ -1.37
VCAN-202ENST00000342785 ENPP1P22413 925 aa6.49□□□□□ -1.37
VCAN-202ENST00000342785 FKBP2P26885 142 aaKnown RBP6.49□□□□□ -1.37
VCAN-202ENST00000342785 PSMB6P28072 239 aa6.49□□□□□ -1.37
VCAN-202ENST00000342785 ABCD3P28288 659 aa6.49□□□□□ -1.37
VCAN-202ENST00000342785 PEBP1P30086 187 aaKnown RBP6.49□□□□□ -1.37
VCAN-202ENST00000342785 SNRPNP63162 240 aaKnown RBP6.49□□□□□ -1.37
VCAN-202ENST00000342785 TOR2AQ5JU69 321 aa6.49□□□□□ -1.37
VCAN-202ENST00000342785 PWWP2BQ6NUJ5 590 aa6.49□□□□□ -1.37
VCAN-202ENST00000342785 OGFOD3Q6PK18 319 aa6.49□□□□□ -1.37
VCAN-202ENST00000342785 ACOT7LQ6ZUV0 252 aa6.49□□□□□ -1.37
VCAN-202ENST00000342785 SYT13Q7L8C5 426 aa6.49□□□□□ -1.37
VCAN-202ENST00000342785 RNF128Q8TEB7 428 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms