RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 BMFQ96LC9 184 aa11.23□□□□□ -0.61
SNRNP48-201ENST00000342415 HLA-DQB1P01920 261 aa11.23□□□□□ -0.61
SNRNP48-201ENST00000342415 CTSBP07858 339 aa11.23□□□□□ -0.61
SNRNP48-201ENST00000342415 GALP22466 123 aa11.23□□□□□ -0.61
SNRNP48-201ENST00000342415 OPRM1P35372 400 aa11.23□□□□□ -0.61
SNRNP48-201ENST00000342415 HSD17B7P56937 341 aa11.23□□□□□ -0.61
SNRNP48-201ENST00000342415 CLINT1Q14677 625 aa11.23□□□□□ -0.61
SNRNP48-201ENST00000342415 BEND4Q6ZU67 534 aa11.23□□□□□ -0.61
SNRNP48-201ENST00000342415 CPEB2Q7Z5Q1 589 aaKnown RBP11.23□□□□□ -0.61
SNRNP48-201ENST00000342415 ADAT1Q9BUB4 502 aaKnown RBP11.23□□□□□ -0.61
SNRNP48-201ENST00000342415 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.23□□□□□ -0.61
SNRNP48-201ENST00000342415 ZNF629Q9UEG4 869 aaPredicted RBP11.23□□□□□ -0.61
SNRNP48-201ENST00000342415 PCDHB10Q9UN67 800 aa11.23□□□□□ -0.61
SNRNP48-201ENST00000342415 CASP8AP2Q9UKL3 1982 aa11.23□□□□□ -0.61
SNRNP48-201ENST00000342415 ANKRD20A5PA0PJZ0 165 aa11.22□□□□□ -0.61
SNRNP48-201ENST00000342415 TO15178 435 aa11.22□□□□□ -0.61
SNRNP48-201ENST00000342415 KLK3P07288 261 aaPredicted RBP11.22□□□□□ -0.61
SNRNP48-201ENST00000342415 PSMB6P28072 239 aa11.22□□□□□ -0.61
SNRNP48-201ENST00000342415 SRYQ05066 204 aa11.22□□□□□ -0.61
SNRNP48-201ENST00000342415 C19orf57Q0VDD7 668 aa11.22□□□□□ -0.61
SNRNP48-201ENST00000342415 ZNF626Q68DY1 528 aa11.22□□□□□ -0.61
SNRNP48-201ENST00000342415 ACOT7LQ6ZUV0 252 aa11.22□□□□□ -0.61
SNRNP48-201ENST00000342415 BPHLQ86WA6 291 aaPredicted RBP11.22□□□□□ -0.61
SNRNP48-201ENST00000342415 GALNT16Q8N428 558 aa11.22□□□□□ -0.61
SNRNP48-201ENST00000342415 OR4D6Q8NGJ1 314 aa11.22□□□□□ -0.61
SNRNP48-201ENST00000342415 OR10Z1Q8NGY1 313 aa11.22□□□□□ -0.61
SNRNP48-201ENST00000342415 ST7LQ8TDW4 575 aa11.22□□□□□ -0.61
SNRNP48-201ENST00000342415 APOBEC4Q8WW27 367 aaKnown RBP11.22□□□□□ -0.61
SNRNP48-201ENST00000342415 C8orf44Q96CB5 159 aa11.22□□□□□ -0.61
SNRNP48-201ENST00000342415 ANKRD10Q9NXR5 420 aa11.22□□□□□ -0.61
SNRNP48-201ENST00000342415 OPN4Q9UHM6 478 aa11.22□□□□□ -0.61
SNRNP48-201ENST00000342415 ST6GALNAC2Q9UJ37 374 aa11.22□□□□□ -0.61
SNRNP48-201ENST00000342415 KLHDC2Q9Y2U9 406 aa11.22□□□□□ -0.61
SNRNP48-201ENST00000342415 SLC17A2O00624 439 aa11.22□□□□□ -0.61
SNRNP48-201ENST00000342415 ALOX12BO75342 701 aa11.22□□□□□ -0.61
SNRNP48-201ENST00000342415 CDAP32320 146 aa11.22□□□□□ -0.61
SNRNP48-201ENST00000342415 GPR157Q5UAW9 335 aa11.22□□□□□ -0.61
SNRNP48-201ENST00000342415 TMEM200AQ86VY9 491 aa11.22□□□□□ -0.61
SNRNP48-201ENST00000342415 FAM71CQ8NEG0 241 aa11.22□□□□□ -0.61
SNRNP48-201ENST00000342415 C14orf79Q96F83 325 aa11.22□□□□□ -0.61
SNRNP48-201ENST00000342415 PGLYRP3Q96LB9 341 aa11.22□□□□□ -0.61
SNRNP48-201ENST00000342415 C4orf45Q96LM5 186 aa11.22□□□□□ -0.61
SNRNP48-201ENST00000342415 KIF25Q9UIL4 384 aa11.22□□□□□ -0.61
SNRNP48-201ENST00000342415 FAM96BQ9Y3D0 163 aa11.22□□□□□ -0.61
SNRNP48-201ENST00000342415 URGCP-MRPS24S4R325 110 aa11.22□□□□□ -0.61
SNRNP48-201ENST00000342415 ZNF318Q5VUA4 2279 aa11.22□□□□□ -0.61
SNRNP48-201ENST00000342415 RPS10-NUDT3A0A1W2PQS6 291 aa11.22□□□□□ -0.61
SNRNP48-201ENST00000342415 STMND1H3BQB6 276 aa11.22□□□□□ -0.61
SNRNP48-201ENST00000342415 GPR31O00270 319 aa11.22□□□□□ -0.61
SNRNP48-201ENST00000342415 OGG1O15527 345 aa11.22□□□□□ -0.61
SNRNP48-201ENST00000342415 CNOT4O95628 575 aaKnown RBP11.22□□□□□ -0.61
SNRNP48-201ENST00000342415 NGFRP08138 427 aa11.22□□□□□ -0.61
SNRNP48-201ENST00000342415 CTLA4P16410 223 aa11.22□□□□□ -0.61
SNRNP48-201ENST00000342415 ABOP16442 354 aa11.22□□□□□ -0.61
SNRNP48-201ENST00000342415 RPS10P46783 165 aaKnown RBP11.22□□□□□ -0.61
SNRNP48-201ENST00000342415 CLDN17P56750 224 aa11.22□□□□□ -0.61
SNRNP48-201ENST00000342415 BPIFCQ8NFQ6 507 aa11.22□□□□□ -0.61
SNRNP48-201ENST00000342415 GPR137Q96N19 417 aa11.22□□□□□ -0.61
SNRNP48-201ENST00000342415 MCOLN1Q9GZU1 580 aa11.22□□□□□ -0.61
SNRNP48-201ENST00000342415 WWTR1Q9GZV5 400 aa11.22□□□□□ -0.61
SNRNP48-201ENST00000342415 GPR160Q9UJ42 338 aa11.22□□□□□ -0.61
SNRNP48-201ENST00000342415 RAB22AQ9UL26 194 aa11.22□□□□□ -0.61
SNRNP48-201ENST00000342415 LRP12Q9Y561 859 aa11.22□□□□□ -0.61
SNRNP48-201ENST00000342415 A0A087WV48 116 aa11.21□□□□□ -0.61
SNRNP48-201ENST00000342415 ARPC4-TTLL3A0A0A6YYG9 625 aa11.21□□□□□ -0.61
SNRNP48-201ENST00000342415 C17orf51A8MQB3 221 aa11.21□□□□□ -0.61
SNRNP48-201ENST00000342415 OR7C1O76099 320 aaPredicted RBP11.21□□□□□ -0.61
SNRNP48-201ENST00000342415 ENPP1P22413 925 aa11.21□□□□□ -0.61
SNRNP48-201ENST00000342415 MTCP1P56278 107 aa11.21□□□□□ -0.61
SNRNP48-201ENST00000342415 TAS2R31P59538 309 aa11.21□□□□□ -0.61
SNRNP48-201ENST00000342415 ACSM1Q08AH1 577 aa11.21□□□□□ -0.61
SNRNP48-201ENST00000342415 PLA2G7Q13093 441 aa11.21□□□□□ -0.61
SNRNP48-201ENST00000342415 PPP1R1AQ13522 171 aa11.21□□□□□ -0.61
SNRNP48-201ENST00000342415 C14orf28Q4W4Y0 310 aa11.21□□□□□ -0.61
SNRNP48-201ENST00000342415 ZNF321PQ8N8H1 164 aa11.21□□□□□ -0.61
SNRNP48-201ENST00000342415 OTOSQ8NHW6 89 aa11.21□□□□□ -0.61
SNRNP48-201ENST00000342415 AICDAQ9GZX7 198 aa11.21□□□□□ -0.61
SNRNP48-201ENST00000342415 EVA1AQ9H8M9 152 aa11.21□□□□□ -0.61
SNRNP48-201ENST00000342415 FBRSQ9HAH7 460 aa11.21□□□□□ -0.61
SNRNP48-201ENST00000342415 ARPC3O15145 178 aa11.21□□□□□ -0.61
SNRNP48-201ENST00000342415 ZNF749O43361 778 aa11.21□□□□□ -0.61
SNRNP48-201ENST00000342415 OIP5O43482 229 aa11.21□□□□□ -0.61
SNRNP48-201ENST00000342415 GABRA1P14867 456 aa11.21□□□□□ -0.61
SNRNP48-201ENST00000342415 TMEM255AQ5JRV8 349 aa11.21□□□□□ -0.61
SNRNP48-201ENST00000342415 TMEM65Q6PI78 240 aa11.21□□□□□ -0.61
SNRNP48-201ENST00000342415 ADGRG3Q86Y34 549 aa11.21□□□□□ -0.61
SNRNP48-201ENST00000342415 OR1S2Q8NGQ3 325 aa11.21□□□□□ -0.61
SNRNP48-201ENST00000342415 NT5CQ8TCD5 201 aa11.21□□□□□ -0.61
SNRNP48-201ENST00000342415 SLAMF6Q96DU3 332 aa11.21□□□□□ -0.61
SNRNP48-201ENST00000342415 BORCS8Q96FH0 119 aa11.21□□□□□ -0.61
SNRNP48-201ENST00000342415 TSPAN32Q96QS1 320 aa11.21□□□□□ -0.61
SNRNP48-201ENST00000342415 TMEM272A0A1B0GTI8 110 aa11.21□□□□□ -0.62
SNRNP48-201ENST00000342415 LINC00862A6NCI5 91 aa11.21□□□□□ -0.62
SNRNP48-201ENST00000342415 MTRF1O75570 445 aaKnown RBP11.21□□□□□ -0.62
SNRNP48-201ENST00000342415 F12P00748 615 aaPredicted RBP11.21□□□□□ -0.62
SNRNP48-201ENST00000342415 IGKV1D-16P01601 117 aa11.21□□□□□ -0.62
SNRNP48-201ENST00000342415 IGHG1P01857 330 aa11.21□□□□□ -0.62
SNRNP48-201ENST00000342415 NAGAP17050 411 aa11.21□□□□□ -0.62
SNRNP48-201ENST00000342415 TNFRSF4P43489 277 aa11.21□□□□□ -0.62
SNRNP48-201ENST00000342415 OR2B8PP59922 312 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 124 ms