RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 HMGA1P17096 107 aaKnown RBP16.68■□□□□ 0.26
SMPD1-201ENST00000342245 CXCR1P25024 350 aa16.68■□□□□ 0.26
SMPD1-201ENST00000342245 ZNF157P51786 506 aaPredicted RBP16.68■□□□□ 0.26
SMPD1-201ENST00000342245 ADGRE4PQ86SQ3 457 aa16.68■□□□□ 0.26
SMPD1-201ENST00000342245 ZNF615Q8N8J6 731 aa16.68■□□□□ 0.26
SMPD1-201ENST00000342245 HSD17B11Q8NBQ5 300 aa16.68■□□□□ 0.26
SMPD1-201ENST00000342245 RNASEH2CQ8TDP1 164 aaKnown RBP16.68■□□□□ 0.26
SMPD1-201ENST00000342245 MRGPRFQ96AM1 343 aa16.68■□□□□ 0.26
SMPD1-201ENST00000342245 MVB12AQ96EY5 273 aa16.68■□□□□ 0.26
SMPD1-201ENST00000342245 ALG12Q9BV10 488 aa16.68■□□□□ 0.26
SMPD1-201ENST00000342245 DDA1Q9BW61 102 aa16.68■□□□□ 0.26
SMPD1-201ENST00000342245 SLC25A13Q9UJS0 675 aa16.68■□□□□ 0.26
SMPD1-201ENST00000342245 A0A0G2JN53 185 aa16.67■□□□□ 0.26
SMPD1-201ENST00000342245 PRR32B1ATL7 298 aa16.67■□□□□ 0.26
SMPD1-201ENST00000342245 TOX3O15405 576 aaPredicted RBP16.67■□□□□ 0.26
SMPD1-201ENST00000342245 IFNA6P05013 189 aa16.67■□□□□ 0.26
SMPD1-201ENST00000342245 ASGR1P07306 291 aa16.67■□□□□ 0.26
SMPD1-201ENST00000342245 C8orf89P0DMQ9 161 aa16.67■□□□□ 0.26
SMPD1-201ENST00000342245 CD37P11049 281 aa16.67■□□□□ 0.26
SMPD1-201ENST00000342245 CYBAP13498 195 aa16.67■□□□□ 0.26
SMPD1-201ENST00000342245 FABP4P15090 132 aa16.67■□□□□ 0.26
SMPD1-201ENST00000342245 HIST1H1TP22492 207 aaPredicted RBP16.67■□□□□ 0.26
SMPD1-201ENST00000342245 CD70P32970 193 aa16.67■□□□□ 0.26
SMPD1-201ENST00000342245 LSSP48449 732 aa16.67■□□□□ 0.26
SMPD1-201ENST00000342245 SUCLG1P53597 346 aaKnown RBP16.67■□□□□ 0.26
SMPD1-201ENST00000342245 EGR3Q06889 387 aa16.67■□□□□ 0.26
SMPD1-201ENST00000342245 COTL1Q14019 142 aa16.67■□□□□ 0.26
SMPD1-201ENST00000342245 THEM4Q5T1C6 240 aa16.67■□□□□ 0.26
SMPD1-201ENST00000342245 ADAD2Q8NCV1 583 aaKnown RBP16.67■□□□□ 0.26
SMPD1-201ENST00000342245 SOCS4Q8WXH5 440 aa16.67■□□□□ 0.26
SMPD1-201ENST00000342245 SUSD6Q92537 303 aa16.67■□□□□ 0.26
SMPD1-201ENST00000342245 WSB2Q9NYS7 404 aaPredicted RBP16.67■□□□□ 0.26
SMPD1-201ENST00000342245 STRAPQ9Y3F4 350 aaKnown RBP16.67■□□□□ 0.26
SMPD1-201ENST00000342245 MMACHCQ9Y4U1 282 aa16.67■□□□□ 0.26
SMPD1-201ENST00000342245 BRCA2P51587 3418 aa16.67■□□□□ 0.26
SMPD1-201ENST00000342245 ELOA3DA6NLF2 546 aaPredicted RBP16.67■□□□□ 0.26
SMPD1-201ENST00000342245 C9J4A7 227 aa16.67■□□□□ 0.26
SMPD1-201ENST00000342245 ZNF354AO60765 605 aaPredicted RBP16.67■□□□□ 0.26
SMPD1-201ENST00000342245 SLC25A1P53007 311 aa16.67■□□□□ 0.26
SMPD1-201ENST00000342245 CLDN2P57739 230 aa16.67■□□□□ 0.26
SMPD1-201ENST00000342245 EIF2B1Q14232 305 aaKnown RBP16.67■□□□□ 0.26
SMPD1-201ENST00000342245 ELOA3BQ3SY89 546 aa16.67■□□□□ 0.26
SMPD1-201ENST00000342245 SOHLH1Q5JUK2 328 aa16.67■□□□□ 0.26
SMPD1-201ENST00000342245 CLLU1OSQ5K130 101 aa16.67■□□□□ 0.26
SMPD1-201ENST00000342245 GPR137CQ8N3F9 429 aa16.67■□□□□ 0.26
SMPD1-201ENST00000342245 C2orf73Q8N5S3 287 aaPredicted RBP16.67■□□□□ 0.26
SMPD1-201ENST00000342245 ELOA3Q8NG57 546 aa16.67■□□□□ 0.26
SMPD1-201ENST00000342245 TSEN15Q8WW01 171 aaKnown RBP16.67■□□□□ 0.26
SMPD1-201ENST00000342245 HPSE2Q8WWQ2 592 aa16.67■□□□□ 0.26
SMPD1-201ENST00000342245 DTD2Q96FN9 168 aa16.67■□□□□ 0.26
SMPD1-201ENST00000342245 ZNF681Q96N22 645 aa16.67■□□□□ 0.26
SMPD1-201ENST00000342245 CASD1Q96PB1 797 aa16.67■□□□□ 0.26
SMPD1-201ENST00000342245 NMNAT3Q96T66 252 aa16.67■□□□□ 0.26
SMPD1-201ENST00000342245 ACTR3CQ9C0K3 210 aaPredicted RBP16.67■□□□□ 0.26
SMPD1-201ENST00000342245 AMDHD2Q9Y303 409 aa16.67■□□□□ 0.26
SMPD1-201ENST00000342245 GOLT1BQ9Y3E0 138 aa16.67■□□□□ 0.26
SMPD1-201ENST00000342245 ATG4BQ9Y4P1 393 aa16.67■□□□□ 0.26
SMPD1-201ENST00000342245 A0A1B0GVT2 93 aa16.66■□□□□ 0.26
SMPD1-201ENST00000342245 RPL4P36578 427 aaKnown RBP16.66■□□□□ 0.26
SMPD1-201ENST00000342245 LINC01590Q5TEZ4 76 aa16.66■□□□□ 0.26
SMPD1-201ENST00000342245 EXD3Q8N9H8 876 aa16.66■□□□□ 0.26
SMPD1-201ENST00000342245 ZNRF4Q8WWF5 429 aa16.66■□□□□ 0.26
SMPD1-201ENST00000342245 AQP3Q92482 292 aa16.66■□□□□ 0.26
SMPD1-201ENST00000342245 WDR92Q96MX6 357 aa16.66■□□□□ 0.26
SMPD1-201ENST00000342245 OPN3Q9H1Y3 402 aaPredicted RBP16.66■□□□□ 0.26
SMPD1-201ENST00000342245 CKLFQ9UBR5 152 aa16.66■□□□□ 0.26
SMPD1-201ENST00000342245 GTF2A1LQ9UNN4 478 aa16.66■□□□□ 0.26
SMPD1-201ENST00000342245 TMEM269A0A1B0GVZ9 245 aa16.65■□□□□ 0.26
SMPD1-201ENST00000342245 SYNDIG1LA6NDD5 238 aa16.65■□□□□ 0.26
SMPD1-201ENST00000342245 SEC11BP0C7V7 166 aa16.65■□□□□ 0.26
SMPD1-201ENST00000342245 DANCRP0C864 163 aa16.65■□□□□ 0.26
SMPD1-201ENST00000342245 TSFMP43897 325 aaKnown RBP16.65■□□□□ 0.26
SMPD1-201ENST00000342245 SLC10A1Q14973 349 aa16.65■□□□□ 0.26
SMPD1-201ENST00000342245 GGNBP1Q5YKI7 109 aa16.65■□□□□ 0.26
SMPD1-201ENST00000342245 TMPPEQ6ZT21 453 aa16.65■□□□□ 0.26
SMPD1-201ENST00000342245 DCBLD2Q96PD2 775 aa16.65■□□□□ 0.26
SMPD1-201ENST00000342245 SCGB3A2Q96PL1 93 aa16.65■□□□□ 0.26
SMPD1-201ENST00000342245 LSM7Q9UK45 103 aaKnown RBP16.65■□□□□ 0.26
SMPD1-201ENST00000342245 EREGO14944 169 aa16.65■□□□□ 0.26
SMPD1-201ENST00000342245 CYTIPO60759 359 aa16.65■□□□□ 0.26
SMPD1-201ENST00000342245 SFT2D2O95562 160 aa16.65■□□□□ 0.26
SMPD1-201ENST00000342245 ID4P47928 161 aa16.65■□□□□ 0.26
SMPD1-201ENST00000342245 DHPSP49366 369 aaPredicted RBP16.65■□□□□ 0.26
SMPD1-201ENST00000342245 ELOBQ15370 118 aa16.65■□□□□ 0.26
SMPD1-201ENST00000342245 OR2T2Q6IF00 324 aa16.65■□□□□ 0.26
SMPD1-201ENST00000342245 VITQ6UXI7 678 aa16.65■□□□□ 0.26
SMPD1-201ENST00000342245 TTLL10Q6ZVT0 673 aa16.65■□□□□ 0.26
SMPD1-201ENST00000342245 DTWD2Q8NBA8 298 aa16.65■□□□□ 0.26
SMPD1-201ENST00000342245 SUMF2Q8NBJ7 301 aa16.65■□□□□ 0.26
SMPD1-201ENST00000342245 LMF1Q96S06 567 aa16.65■□□□□ 0.26
SMPD1-201ENST00000342245 SLC26A1Q9H2B4 701 aa16.65■□□□□ 0.26
SMPD1-201ENST00000342245 RRAGCQ9HB90 399 aa16.65■□□□□ 0.26
SMPD1-201ENST00000342245 TMEM235A6NFC5 223 aa16.64■□□□□ 0.26
SMPD1-201ENST00000342245 GRPRP30550 384 aa16.64■□□□□ 0.26
SMPD1-201ENST00000342245 RPUSD3Q6P087 351 aaKnown RBP16.64■□□□□ 0.26
SMPD1-201ENST00000342245 RTN4RL1Q86UN2 441 aaPredicted RBP16.64■□□□□ 0.26
SMPD1-201ENST00000342245 HOGA1Q86XE5 327 aa16.64■□□□□ 0.26
SMPD1-201ENST00000342245 OR4S1Q8NGB4 309 aa16.64■□□□□ 0.26
SMPD1-201ENST00000342245 MRGPRX3Q96LB0 322 aa16.64■□□□□ 0.26
SMPD1-201ENST00000342245 GNRHR2Q96P88 292 aa16.64■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms