RNA–Protein interactions for RNA: ENST00000341529.7

CDH5-201, Transcript of cadherin 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH5, Length 4,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-201ENST00000341529 TXNIPQ9H3M7 391 aa10.79□□□□□ -0.68
CDH5-201ENST00000341529 KCNE5Q9UJ90 142 aa10.79□□□□□ -0.68
CDH5-201ENST00000341529 PADI1Q9ULC6 663 aa10.79□□□□□ -0.68
CDH5-201ENST00000341529 LRP12Q9Y561 859 aa10.79□□□□□ -0.68
CDH5-201ENST00000341529 RBBP6Q7Z6E9 1792 aaKnown RBP10.79□□□□□ -0.68
CDH5-201ENST00000341529 ZFHX2Q9C0A1 2572 aaPredicted RBP10.79□□□□□ -0.68
CDH5-201ENST00000341529 TEX51A0A1B0GUA7 166 aa10.79□□□□□ -0.68
CDH5-201ENST00000341529 RER1O15258 196 aa10.79□□□□□ -0.68
CDH5-201ENST00000341529 EFSO43281 561 aa10.79□□□□□ -0.68
CDH5-201ENST00000341529 MT-ATP6P00846 226 aa10.79□□□□□ -0.68
CDH5-201ENST00000341529 HPXP02790 462 aa10.79□□□□□ -0.68
CDH5-201ENST00000341529 RAF1P04049 648 aa10.79□□□□□ -0.68
CDH5-201ENST00000341529 ACHEP22303 614 aa10.79□□□□□ -0.68
CDH5-201ENST00000341529 HRH1P35367 487 aa10.79□□□□□ -0.68
CDH5-201ENST00000341529 PPT1P50897 306 aa10.79□□□□□ -0.68
CDH5-201ENST00000341529 PLEKHN1Q494U1 663 aaPredicted RBP10.79□□□□□ -0.68
CDH5-201ENST00000341529 DND1Q8IYX4 353 aaKnown RBP10.79□□□□□ -0.68
CDH5-201ENST00000341529 OR52N5Q8NH56 324 aa10.79□□□□□ -0.68
CDH5-201ENST00000341529 TSPAN32Q96QS1 320 aa10.79□□□□□ -0.68
CDH5-201ENST00000341529 NICN1Q9BSH3 213 aa10.79□□□□□ -0.68
CDH5-201ENST00000341529 NXT1Q9UKK6 140 aaKnown RBP10.79□□□□□ -0.68
CDH5-201ENST00000341529 CUL9Q8IWT3 2517 aa10.79□□□□□ -0.68
CDH5-201ENST00000341529 ATRXP46100 2492 aa10.79□□□□□ -0.68
CDH5-201ENST00000341529 SMCO3A2RU48 225 aa10.78□□□□□ -0.68
CDH5-201ENST00000341529 NME1P15531 152 aaKnown RBP10.78□□□□□ -0.68
CDH5-201ENST00000341529 CARD18P57730 90 aa10.78□□□□□ -0.68
CDH5-201ENST00000341529 CLINT1Q14677 625 aa10.78□□□□□ -0.68
CDH5-201ENST00000341529 KIF26BQ2KJY2 2108 aa10.78□□□□□ -0.68
CDH5-201ENST00000341529 OGFOD3Q6PK18 319 aa10.78□□□□□ -0.68
CDH5-201ENST00000341529 BRICD5Q6PL45 260 aa10.78□□□□□ -0.68
CDH5-201ENST00000341529 KCNG3Q8TAE7 436 aa10.78□□□□□ -0.68
CDH5-201ENST00000341529 GLYATL2Q8WU03 294 aa10.78□□□□□ -0.68
CDH5-201ENST00000341529 C11orf40Q8WZ69 217 aa10.78□□□□□ -0.68
CDH5-201ENST00000341529 VSTM2LQ96N03 204 aa10.78□□□□□ -0.68
CDH5-201ENST00000341529 GABRG3Q99928 467 aa10.78□□□□□ -0.68
CDH5-201ENST00000341529 TRAPPC4Q9Y296 219 aa10.78□□□□□ -0.68
CDH5-201ENST00000341529 DCTN6O00399 190 aa10.78□□□□□ -0.68
CDH5-201ENST00000341529 ZNHIT1O43257 154 aa10.78□□□□□ -0.68
CDH5-201ENST00000341529 CXCL13O43927 109 aa10.78□□□□□ -0.68
CDH5-201ENST00000341529 ZNF205O95201 554 aa10.78□□□□□ -0.68
CDH5-201ENST00000341529 CT45A8P0DMV1 189 aa10.78□□□□□ -0.68
CDH5-201ENST00000341529 CT45A9P0DMV2 189 aa10.78□□□□□ -0.68
CDH5-201ENST00000341529 FAHP16930 419 aa10.78□□□□□ -0.68
CDH5-201ENST00000341529 BCKDHBP21953 392 aa10.78□□□□□ -0.68
CDH5-201ENST00000341529 UBE2NP61088 152 aaKnown RBP10.78□□□□□ -0.68
CDH5-201ENST00000341529 IAH1Q2TAA2 248 aaPredicted RBP10.78□□□□□ -0.68
CDH5-201ENST00000341529 CT45A2Q5DJT8 189 aa10.78□□□□□ -0.68
CDH5-201ENST00000341529 HACD4Q5VWC8 232 aa10.78□□□□□ -0.68
CDH5-201ENST00000341529 ZNF695Q8IW36 515 aa10.78□□□□□ -0.68
CDH5-201ENST00000341529 OR51A2Q8NGJ7 313 aa10.78□□□□□ -0.68
CDH5-201ENST00000341529 TMED6Q8WW62 240 aa10.78□□□□□ -0.68
CDH5-201ENST00000341529 NINJ1Q92982 152 aa10.78□□□□□ -0.68
CDH5-201ENST00000341529 ZNF646O15015 1829 aaPredicted RBP10.78□□□□□ -0.68
CDH5-201ENST00000341529 NYNRINQ9P2P1 1898 aaKnown RBP10.78□□□□□ -0.68
CDH5-201ENST00000341529 IGHV1OR21-1A0A087WYE8 117 aa10.78□□□□□ -0.68
CDH5-201ENST00000341529 A6NCN8 305 aa10.78□□□□□ -0.68
CDH5-201ENST00000341529 GLB1P16278 677 aa10.78□□□□□ -0.68
CDH5-201ENST00000341529 CCL7P80098 99 aa10.78□□□□□ -0.68
CDH5-201ENST00000341529 BDH1Q02338 343 aa10.78□□□□□ -0.68
CDH5-201ENST00000341529 TMUB2Q71RG4 321 aa10.78□□□□□ -0.68
CDH5-201ENST00000341529 NLRC3Q7RTR2 1065 aa10.78□□□□□ -0.68
CDH5-201ENST00000341529 C20orf196Q8IYI0 205 aa10.78□□□□□ -0.68
CDH5-201ENST00000341529 OTOSQ8NHW6 89 aa10.78□□□□□ -0.68
CDH5-201ENST00000341529 UBALD1Q8TB05 177 aa10.78□□□□□ -0.68
CDH5-201ENST00000341529 RRNAD1Q96FB5 475 aaKnown RBP10.78□□□□□ -0.68
CDH5-201ENST00000341529 WDFY2Q96P53 400 aa10.78□□□□□ -0.68
CDH5-201ENST00000341529 ETV7Q9Y603 341 aa10.78□□□□□ -0.68
CDH5-201ENST00000341529 SHANK1Q9Y566 2161 aa10.78□□□□□ -0.68
CDH5-201ENST00000341529 PDCD11Q14690 1871 aaKnown RBP10.78□□□□□ -0.68
CDH5-201ENST00000341529 TRAV8-7A0A075B6U6 113 aa10.77□□□□□ -0.68
CDH5-201ENST00000341529 SEMG1P04279 462 aa10.77□□□□□ -0.68
CDH5-201ENST00000341529 UBCP0CG48 685 aaKnown RBP10.77□□□□□ -0.68
CDH5-201ENST00000341529 PPP3CBP16298 524 aa10.77□□□□□ -0.68
CDH5-201ENST00000341529 ZNF14P17017 642 aaPredicted RBP10.77□□□□□ -0.68
CDH5-201ENST00000341529 DUSP1P28562 367 aa10.77□□□□□ -0.68
CDH5-201ENST00000341529 EPHA4P54764 986 aa10.77□□□□□ -0.68
CDH5-201ENST00000341529 ARG2P78540 354 aa10.77□□□□□ -0.68
CDH5-201ENST00000341529 TMEM217Q8N7C4 229 aa10.77□□□□□ -0.68
CDH5-201ENST00000341529 OR1M1Q8NGA1 313 aa10.77□□□□□ -0.68
CDH5-201ENST00000341529 HAVCR2Q8TDQ0 301 aa10.77□□□□□ -0.68
CDH5-201ENST00000341529 ROBO4Q8WZ75 1007 aa10.77□□□□□ -0.68
CDH5-201ENST00000341529 YIPF5Q969M3 257 aa10.77□□□□□ -0.68
CDH5-201ENST00000341529 C10orf90Q96M02 699 aa10.77□□□□□ -0.68
CDH5-201ENST00000341529 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.77□□□□□ -0.68
CDH5-201ENST00000341529 PCDHB16Q9NRJ7 776 aa10.77□□□□□ -0.68
CDH5-201ENST00000341529 RABL2AQ9UBK7 228 aaPredicted RBP10.77□□□□□ -0.68
CDH5-201ENST00000341529 MRM2Q9UI43 246 aaKnown RBP10.77□□□□□ -0.68
CDH5-201ENST00000341529 RABL2BQ9UNT1 228 aa10.77□□□□□ -0.68
CDH5-201ENST00000341529 IGHV1OR15-9A0A0B4J2B8 117 aa10.77□□□□□ -0.69
CDH5-201ENST00000341529 FOXS1O43638 330 aa10.77□□□□□ -0.69
CDH5-201ENST00000341529 MED6O75586 246 aa10.77□□□□□ -0.69
CDH5-201ENST00000341529 ABHD16AO95870 558 aa10.77□□□□□ -0.69
CDH5-201ENST00000341529 CBR1P16152 277 aa10.77□□□□□ -0.69
CDH5-201ENST00000341529 ZNF169Q14929 603 aaPredicted RBP10.77□□□□□ -0.69
CDH5-201ENST00000341529 LYPD8Q6UX82 237 aa10.77□□□□□ -0.69
CDH5-201ENST00000341529 GVQW1Q8N7I0 195 aa10.77□□□□□ -0.69
CDH5-201ENST00000341529 OR2AK2Q8NG84 335 aa10.77□□□□□ -0.69
CDH5-201ENST00000341529 ARL11Q969Q4 196 aa10.77□□□□□ -0.69
CDH5-201ENST00000341529 PRSS27Q9BQR3 290 aa10.77□□□□□ -0.69
CDH5-201ENST00000341529 CLEC1BQ9P126 229 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms