RNA–Protein interactions for RNA: ENST00000340993.10

TUBD1-202, Transcript of tubulin delta 1, humanhuman

TSL 1 (best) BASIC

Gene TUBD1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-202ENST00000340993 TMCC2O75069 709 aa11.37□□□□□ -0.59
TUBD1-202ENST00000340993 LY6HO94772 140 aa11.37□□□□□ -0.59
TUBD1-202ENST00000340993 DANCRP0C864 163 aa11.37□□□□□ -0.59
TUBD1-202ENST00000340993 APOBEC3AP31941 199 aaPredicted RBP11.37□□□□□ -0.59
TUBD1-202ENST00000340993 SERPINF1P36955 418 aa11.37□□□□□ -0.59
TUBD1-202ENST00000340993 ALDH3B1P43353 468 aa11.37□□□□□ -0.59
TUBD1-202ENST00000340993 NKX6-1P78426 367 aaPredicted RBP11.37□□□□□ -0.59
TUBD1-202ENST00000340993 IL5RAQ01344 420 aa11.37□□□□□ -0.59
TUBD1-202ENST00000340993 AADACL4Q5VUY2 407 aa11.37□□□□□ -0.59
TUBD1-202ENST00000340993 RGS7BPQ6MZT1 257 aaPredicted RBP11.37□□□□□ -0.59
TUBD1-202ENST00000340993 PLEKHG7Q6ZR37 379 aa11.37□□□□□ -0.59
TUBD1-202ENST00000340993 SYT9Q86SS6 491 aa11.37□□□□□ -0.59
TUBD1-202ENST00000340993 ENTHD1Q8IYW4 607 aa11.37□□□□□ -0.59
TUBD1-202ENST00000340993 IL17RDQ8NFM7 739 aa11.37□□□□□ -0.59
TUBD1-202ENST00000340993 SLC25A40Q8TBP6 338 aa11.37□□□□□ -0.59
TUBD1-202ENST00000340993 GTF3AQ92664 365 aaKnown RBP11.37□□□□□ -0.59
TUBD1-202ENST00000340993 CNN2Q99439 309 aaKnown RBP11.37□□□□□ -0.59
TUBD1-202ENST00000340993 VRK1Q99986 396 aaPredicted RBP11.37□□□□□ -0.59
TUBD1-202ENST00000340993 ABHD6Q9BV23 337 aa11.37□□□□□ -0.59
TUBD1-202ENST00000340993 OR2J1Q9GZK6 312 aa11.37□□□□□ -0.59
TUBD1-202ENST00000340993 TPK1Q9H3S4 243 aa11.37□□□□□ -0.59
TUBD1-202ENST00000340993 PLK3Q9H4B4 646 aa11.37□□□□□ -0.59
TUBD1-202ENST00000340993 FAIMQ9NVQ4 179 aa11.37□□□□□ -0.59
TUBD1-202ENST00000340993 PTTG3PQ9NZH4 202 aa11.37□□□□□ -0.59
TUBD1-202ENST00000340993 NDRG4Q9ULP0 352 aaKnown RBP11.37□□□□□ -0.59
TUBD1-202ENST00000340993 COPS3Q9UNS2 423 aa11.37□□□□□ -0.59
TUBD1-202ENST00000340993 SPEF1Q9Y4P9 236 aa11.37□□□□□ -0.59
TUBD1-202ENST00000340993 A0A1W2PPW3 197 aa11.36□□□□□ -0.59
TUBD1-202ENST00000340993 C5orf63A6NC05 138 aa11.36□□□□□ -0.59
TUBD1-202ENST00000340993 ATP6V1G2O95670 118 aa11.36□□□□□ -0.59
TUBD1-202ENST00000340993 ATP6V1E1P36543 226 aa11.36□□□□□ -0.59
TUBD1-202ENST00000340993 MPV17P39210 176 aa11.36□□□□□ -0.59
TUBD1-202ENST00000340993 ART1P52961 327 aa11.36□□□□□ -0.59
TUBD1-202ENST00000340993 AQP4P55087 323 aa11.36□□□□□ -0.59
TUBD1-202ENST00000340993 HLXQ14774 488 aaPredicted RBP11.36□□□□□ -0.59
TUBD1-202ENST00000340993 GFOD2Q3B7J2 385 aa11.36□□□□□ -0.59
TUBD1-202ENST00000340993 LCN1P1Q5VSP4 162 aa11.36□□□□□ -0.59
TUBD1-202ENST00000340993 AGAP6Q5VW22 663 aa11.36□□□□□ -0.59
TUBD1-202ENST00000340993 NXNL2Q5VZ03 156 aa11.36□□□□□ -0.59
TUBD1-202ENST00000340993 LRRN1Q6UXK5 716 aa11.36□□□□□ -0.59
TUBD1-202ENST00000340993 OR8J1Q8NGP2 316 aa11.36□□□□□ -0.59
TUBD1-202ENST00000340993 CNIH3Q8TBE1 160 aa11.36□□□□□ -0.59
TUBD1-202ENST00000340993 ST7LQ8TDW4 575 aa11.36□□□□□ -0.59
TUBD1-202ENST00000340993 HDHD2Q9H0R4 259 aa11.36□□□□□ -0.59
TUBD1-202ENST00000340993 LAMP5Q9UJQ1 280 aa11.36□□□□□ -0.59
TUBD1-202ENST00000340993 STARD10Q9Y365 291 aa11.36□□□□□ -0.59
TUBD1-202ENST00000340993 CMAHPQ9Y471 501 aa11.36□□□□□ -0.59
TUBD1-202ENST00000340993 ITPR3Q14573 2671 aa11.36□□□□□ -0.59
TUBD1-202ENST00000340993 PRR32B1ATL7 298 aa11.36□□□□□ -0.59
TUBD1-202ENST00000340993 CASQ2O14958 399 aaPredicted RBP11.36□□□□□ -0.59
TUBD1-202ENST00000340993 LCATP04180 440 aa11.36□□□□□ -0.59
TUBD1-202ENST00000340993 LYNP07948 512 aa11.36□□□□□ -0.59
TUBD1-202ENST00000340993 GNAO1P09471 354 aa11.36□□□□□ -0.59
TUBD1-202ENST00000340993 HSD11B1P28845 292 aa11.36□□□□□ -0.59
TUBD1-202ENST00000340993 PPP1CBP62140 327 aa11.36□□□□□ -0.59
TUBD1-202ENST00000340993 EFNB1P98172 346 aa11.36□□□□□ -0.59
TUBD1-202ENST00000340993 CHD3Q12873 2000 aaKnown RBP11.36□□□□□ -0.59
TUBD1-202ENST00000340993 SMN1Q16637 294 aaKnown RBP11.36□□□□□ -0.59
TUBD1-202ENST00000340993 RSPO1Q2MKA7 263 aaPredicted RBP11.36□□□□□ -0.59
TUBD1-202ENST00000340993 SLC35D3Q5M8T2 416 aa11.36□□□□□ -0.59
TUBD1-202ENST00000340993 C6orf52Q5T4I8 152 aa11.36□□□□□ -0.59
TUBD1-202ENST00000340993 GID4Q8IVV7 300 aa11.36□□□□□ -0.59
TUBD1-202ENST00000340993 SLC35F2Q8IXU6 374 aa11.36□□□□□ -0.59
TUBD1-202ENST00000340993 OR5AS1Q8N127 324 aa11.36□□□□□ -0.59
TUBD1-202ENST00000340993 ZNF283Q8N7M2 679 aa11.36□□□□□ -0.59
TUBD1-202ENST00000340993 NUP37Q8NFH4 326 aa11.36□□□□□ -0.59
TUBD1-202ENST00000340993 OR10H4Q8NGA5 316 aa11.36□□□□□ -0.59
TUBD1-202ENST00000340993 TRAF4Q9BUZ4 470 aaPredicted RBP11.36□□□□□ -0.59
TUBD1-202ENST00000340993 DYNLRB1Q9NP97 96 aa11.36□□□□□ -0.59
TUBD1-202ENST00000340993 CBLN4Q9NTU7 201 aa11.36□□□□□ -0.59
TUBD1-202ENST00000340993 M0R135 149 aa11.35□□□□□ -0.59
TUBD1-202ENST00000340993 TBX1O43435 398 aa11.35□□□□□ -0.59
TUBD1-202ENST00000340993 ANXA2P07355 339 aaKnown RBP11.35□□□□□ -0.59
TUBD1-202ENST00000340993 H2BFMP0C1H6 154 aa11.35□□□□□ -0.59
TUBD1-202ENST00000340993 NAT2P11245 290 aa11.35□□□□□ -0.59
TUBD1-202ENST00000340993 PAX7P23759 505 aa11.35□□□□□ -0.59
TUBD1-202ENST00000340993 RAD52P43351 418 aa11.35□□□□□ -0.59
TUBD1-202ENST00000340993 BLVRAP53004 296 aa11.35□□□□□ -0.59
TUBD1-202ENST00000340993 SNRPD2P62316 118 aaKnown RBP11.35□□□□□ -0.59
TUBD1-202ENST00000340993 HIST1H3AP68431 136 aa11.35□□□□□ -0.59
TUBD1-202ENST00000340993 HNRNPA0Q13151 305 aaKnown RBP11.35□□□□□ -0.59
TUBD1-202ENST00000340993 MST1LQ2TV78 715 aa11.35□□□□□ -0.59
TUBD1-202ENST00000340993 DEFB113Q30KQ7 82 aa11.35□□□□□ -0.59
TUBD1-202ENST00000340993 TMEM255AQ5JRV8 349 aa11.35□□□□□ -0.59
TUBD1-202ENST00000340993 HIST2H3PS2Q5TEC6 136 aa11.35□□□□□ -0.59
TUBD1-202ENST00000340993 HIST2H3AQ71DI3 136 aa11.35□□□□□ -0.59
TUBD1-202ENST00000340993 SLC16A9Q7RTY1 509 aa11.35□□□□□ -0.59
TUBD1-202ENST00000340993 DHRSXQ8N5I4 330 aa11.35□□□□□ -0.59
TUBD1-202ENST00000340993 OR2AE1Q8NHA4 323 aa11.35□□□□□ -0.59
TUBD1-202ENST00000340993 IPCEF1Q8WWN9 437 aaPredicted RBP11.35□□□□□ -0.59
TUBD1-202ENST00000340993 ZNF799Q96GE5 643 aa11.35□□□□□ -0.59
TUBD1-202ENST00000340993 COQ7Q99807 217 aa11.35□□□□□ -0.59
TUBD1-202ENST00000340993 ADI1Q9BV57 179 aa11.35□□□□□ -0.59
TUBD1-202ENST00000340993 VCXQ9H320 206 aa11.35□□□□□ -0.59
TUBD1-202ENST00000340993 ADGRL4Q9HBW9 690 aa11.35□□□□□ -0.59
TUBD1-202ENST00000340993 IKZF2Q9UKS7 526 aa11.35□□□□□ -0.59
TUBD1-202ENST00000340993 GTF2A1LQ9UNN4 478 aa11.35□□□□□ -0.59
TUBD1-202ENST00000340993 SLC22A31A6NKX4 558 aa11.34□□□□□ -0.59
TUBD1-202ENST00000340993 ZNF878C9JN71 531 aa11.34□□□□□ -0.59
TUBD1-202ENST00000340993 ADRA2AP08913 450 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms