RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 ZMAT1Q5H9K5 638 aa15.23■□□□□ 0.03
CLDN4-201ENST00000340958 FBXW9Q5XUX1 488 aa15.23■□□□□ 0.03
CLDN4-201ENST00000340958 NSUN5P2Q63ZY6 315 aa15.23■□□□□ 0.03
CLDN4-201ENST00000340958 FDX2Q6P4F2 183 aa15.23■□□□□ 0.03
CLDN4-201ENST00000340958 RHOUQ7L0Q8 258 aa15.23■□□□□ 0.03
CLDN4-201ENST00000340958 FGD2Q7Z6J4 655 aa15.23■□□□□ 0.03
CLDN4-201ENST00000340958 RDH10Q8IZV5 341 aa15.23■□□□□ 0.03
CLDN4-201ENST00000340958 ZNF283Q8N7M2 679 aa15.23■□□□□ 0.03
CLDN4-201ENST00000340958 TSEN15Q8WW01 171 aaKnown RBP15.23■□□□□ 0.03
CLDN4-201ENST00000340958 FBXO17Q96EF6 278 aa15.23■□□□□ 0.03
CLDN4-201ENST00000340958 C6orf62Q9GZU0 229 aaPredicted RBP15.23■□□□□ 0.03
CLDN4-201ENST00000340958 CCDC59Q9P031 241 aaKnown RBP15.23■□□□□ 0.03
CLDN4-201ENST00000340958 SLC22A13Q9Y226 551 aa15.23■□□□□ 0.03
CLDN4-201ENST00000340958 A0A096LPE4 126 aa15.22■□□□□ 0.03
CLDN4-201ENST00000340958 A0A1W2PPZ6 126 aa15.22■□□□□ 0.03
CLDN4-201ENST00000340958 OR4C45A6NMZ5 311 aa15.22■□□□□ 0.03
CLDN4-201ENST00000340958 RPL36A-HNRNPH2H7BZ11 118 aa15.22■□□□□ 0.03
CLDN4-201ENST00000340958 ARL6IP5O75915 188 aa15.22■□□□□ 0.03
CLDN4-201ENST00000340958 MAPK3P27361 379 aaPredicted RBP15.22■□□□□ 0.03
CLDN4-201ENST00000340958 PTGER4P35408 488 aa15.22■□□□□ 0.03
CLDN4-201ENST00000340958 KLRB1Q12918 225 aa15.22■□□□□ 0.03
CLDN4-201ENST00000340958 STK11Q15831 433 aa15.22■□□□□ 0.03
CLDN4-201ENST00000340958 ZNF404Q494X3 552 aa15.22■□□□□ 0.03
CLDN4-201ENST00000340958 ELFN2Q5R3F8 820 aa15.22■□□□□ 0.03
CLDN4-201ENST00000340958 GFRALQ6UXV0 394 aa15.22■□□□□ 0.03
CLDN4-201ENST00000340958 CATSPERDQ86XM0 798 aa15.22■□□□□ 0.03
CLDN4-201ENST00000340958 GPR148Q8TDV2 347 aa15.22■□□□□ 0.03
CLDN4-201ENST00000340958 RNF166Q96A37 237 aaPredicted RBP15.22■□□□□ 0.03
CLDN4-201ENST00000340958 TIMM10BQ9Y5J6 103 aa15.22■□□□□ 0.03
CLDN4-201ENST00000340958 CACNA1CQ13936 2221 aa15.22■□□□□ 0.03
CLDN4-201ENST00000340958 SMIM30A4D0T7 59 aa15.22■□□□□ 0.03
CLDN4-201ENST00000340958 ZNF879B4DU55 563 aa15.22■□□□□ 0.03
CLDN4-201ENST00000340958 F5H5K5 113 aa15.22■□□□□ 0.03
CLDN4-201ENST00000340958 DVL2O14641 736 aa15.22■□□□□ 0.03
CLDN4-201ENST00000340958 SGCEO43556 437 aa15.22■□□□□ 0.03
CLDN4-201ENST00000340958 DCTDP32321 178 aa15.22■□□□□ 0.03
CLDN4-201ENST00000340958 RANBP1P43487 201 aa15.22■□□□□ 0.03
CLDN4-201ENST00000340958 KIR3DL2P43630 455 aa15.22■□□□□ 0.03
CLDN4-201ENST00000340958 OR3A2P47893 321 aa15.22■□□□□ 0.03
CLDN4-201ENST00000340958 SLC6A9P48067 706 aa15.22■□□□□ 0.03
CLDN4-201ENST00000340958 SOX2P48431 317 aa15.22■□□□□ 0.03
CLDN4-201ENST00000340958 CX3CR1P49238 355 aa15.22■□□□□ 0.03
CLDN4-201ENST00000340958 NRN1LQ496H8 165 aa15.22■□□□□ 0.03
CLDN4-201ENST00000340958 FAM27D1Q5T7N8 215 aa15.22■□□□□ 0.03
CLDN4-201ENST00000340958 FAM57AQ8TBR7 257 aa15.22■□□□□ 0.03
CLDN4-201ENST00000340958 RPS4Y2Q8TD47 263 aa15.22■□□□□ 0.03
CLDN4-201ENST00000340958 SPTSSAQ969W0 71 aa15.22■□□□□ 0.03
CLDN4-201ENST00000340958 MED18Q9BUE0 208 aa15.22■□□□□ 0.03
CLDN4-201ENST00000340958 ACOD1A6NK06 481 aa15.21■□□□□ 0.03
CLDN4-201ENST00000340958 PRRG2O14669 202 aa15.21■□□□□ 0.03
CLDN4-201ENST00000340958 DOK2O60496 412 aa15.21■□□□□ 0.03
CLDN4-201ENST00000340958 ANXA2P07355 339 aaKnown RBP15.21■□□□□ 0.03
CLDN4-201ENST00000340958 CLEC2LP0C7M8 214 aa15.21■□□□□ 0.03
CLDN4-201ENST00000340958 PATE4P0C8F1 98 aa15.21■□□□□ 0.03
CLDN4-201ENST00000340958 ZNF32P17041 273 aa15.21■□□□□ 0.03
CLDN4-201ENST00000340958 MMP16P51512 607 aa15.21■□□□□ 0.03
CLDN4-201ENST00000340958 RPS11P62280 158 aaKnown RBP eCLIP15.21■□□□□ 0.03
CLDN4-201ENST00000340958 HNRNPA0Q13151 305 aaKnown RBP15.21■□□□□ 0.03
CLDN4-201ENST00000340958 SLC36A2Q495M3 483 aa15.21■□□□□ 0.03
CLDN4-201ENST00000340958 Q499Y3 187 aa15.21■□□□□ 0.03
CLDN4-201ENST00000340958 HSD17B12Q53GQ0 312 aa15.21■□□□□ 0.03
CLDN4-201ENST00000340958 C1orf185Q5T7R7 199 aa15.21■□□□□ 0.03
CLDN4-201ENST00000340958 ZNF324BQ6AW86 544 aaPredicted RBP15.21■□□□□ 0.03
CLDN4-201ENST00000340958 ZNF704Q6ZNC4 412 aaPredicted RBP15.21■□□□□ 0.03
CLDN4-201ENST00000340958 COMMD2Q86X83 199 aa15.21■□□□□ 0.03
CLDN4-201ENST00000340958 CROCCP3Q8IVE0 287 aa15.21■□□□□ 0.03
CLDN4-201ENST00000340958 SKA3Q8IX90 412 aa15.21■□□□□ 0.03
CLDN4-201ENST00000340958 PPP1R14AQ96A00 147 aa15.21■□□□□ 0.03
CLDN4-201ENST00000340958 SNRNP40Q96DI7 357 aaKnown RBP15.21■□□□□ 0.03
CLDN4-201ENST00000340958 KCNS3Q9BQ31 491 aa15.21■□□□□ 0.03
CLDN4-201ENST00000340958 SLIRPQ9GZT3 109 aaKnown RBP15.21■□□□□ 0.03
CLDN4-201ENST00000340958 PNRC2Q9NPJ4 139 aaKnown RBP15.21■□□□□ 0.03
CLDN4-201ENST00000340958 MPGP29372 298 aa15.2■□□□□ 0.02
CLDN4-201ENST00000340958 MTNR1BP49286 362 aa15.2■□□□□ 0.02
CLDN4-201ENST00000340958 PSMA6P60900 246 aaKnown RBP15.2■□□□□ 0.02
CLDN4-201ENST00000340958 RAB35Q15286 201 aa15.2■□□□□ 0.02
CLDN4-201ENST00000340958 CCDC92Q53HC0 331 aaPredicted RBP15.2■□□□□ 0.02
CLDN4-201ENST00000340958 SYT9Q86SS6 491 aa15.2■□□□□ 0.02
CLDN4-201ENST00000340958 PHYHIPQ92561 330 aa15.2■□□□□ 0.02
CLDN4-201ENST00000340958 SLC25A46Q96AG3 418 aa15.2■□□□□ 0.02
CLDN4-201ENST00000340958 KCNJ15Q99712 375 aa15.2■□□□□ 0.02
CLDN4-201ENST00000340958 PBOV1Q9GZY1 135 aa15.2■□□□□ 0.02
CLDN4-201ENST00000340958 HDHD2Q9H0R4 259 aa15.2■□□□□ 0.02
CLDN4-201ENST00000340958 SLITRK2Q9H156 845 aa15.2■□□□□ 0.02
CLDN4-201ENST00000340958 MOB1AQ9H8S9 216 aa15.2■□□□□ 0.02
CLDN4-201ENST00000340958 PLGRKTQ9HBL7 147 aa15.2■□□□□ 0.02
CLDN4-201ENST00000340958 FAM206AQ9NX38 181 aa15.2■□□□□ 0.02
CLDN4-201ENST00000340958 MALT1Q9UDY8 824 aa15.2■□□□□ 0.02
CLDN4-201ENST00000340958 DHDHQ9UQ10 334 aa15.2■□□□□ 0.02
CLDN4-201ENST00000340958 SC5DO75845 299 aa15.2■□□□□ 0.02
CLDN4-201ENST00000340958 IL2RAP01589 272 aa15.2■□□□□ 0.02
CLDN4-201ENST00000340958 APOC1P02654 83 aa15.2■□□□□ 0.02
CLDN4-201ENST00000340958 CD79AP11912 226 aa15.2■□□□□ 0.02
CLDN4-201ENST00000340958 ZNF121P58317 390 aaPredicted RBP15.2■□□□□ 0.02
CLDN4-201ENST00000340958 ZNF774Q6NX45 483 aa15.2■□□□□ 0.02
CLDN4-201ENST00000340958 C3P1Q6ZMU1 363 aa15.2■□□□□ 0.02
CLDN4-201ENST00000340958 OR6K3Q8NGY3 331 aa15.2■□□□□ 0.02
CLDN4-201ENST00000340958 TBC1D15Q8TC07 691 aa15.2■□□□□ 0.02
CLDN4-201ENST00000340958 RGP1Q92546 391 aaPredicted RBP15.2■□□□□ 0.02
CLDN4-201ENST00000340958 THRSPQ92748 146 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms