RNA–Protein interactions for RNA: ENST00000340006.6

CSRP1-201, Transcript of cysteine and glycine rich protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSRP1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-201ENST00000340006 RTTNQ86VV8 2226 aa12.87□□□□□ -0.35
CSRP1-201ENST00000340006 IQCMA0A1B0GVH7 501 aa12.87□□□□□ -0.35
CSRP1-201ENST00000340006 ZNF503-AS2A6NEH8 195 aa12.87□□□□□ -0.35
CSRP1-201ENST00000340006 DOK2O60496 412 aa12.87□□□□□ -0.35
CSRP1-201ENST00000340006 KRT8P05787 483 aa12.87□□□□□ -0.35
CSRP1-201ENST00000340006 MMP7P09237 267 aaPredicted RBP12.87□□□□□ -0.35
CSRP1-201ENST00000340006 TACSTD2P09758 323 aa12.87□□□□□ -0.35
CSRP1-201ENST00000340006 PLA2G2AP14555 144 aa12.87□□□□□ -0.35
CSRP1-201ENST00000340006 LIPAP38571 399 aa12.87□□□□□ -0.35
CSRP1-201ENST00000340006 GALK2Q01415 458 aa12.87□□□□□ -0.35
CSRP1-201ENST00000340006 EGR3Q06889 387 aa12.87□□□□□ -0.35
CSRP1-201ENST00000340006 PPA1Q15181 289 aa12.87□□□□□ -0.35
CSRP1-201ENST00000340006 FBXL19-AS1Q494R0 122 aa12.87□□□□□ -0.35
CSRP1-201ENST00000340006 CCDC92Q53HC0 331 aaPredicted RBP12.87□□□□□ -0.35
CSRP1-201ENST00000340006 ELFN2Q5R3F8 820 aa12.87□□□□□ -0.35
CSRP1-201ENST00000340006 LRRN1Q6UXK5 716 aa12.87□□□□□ -0.35
CSRP1-201ENST00000340006 PLEKHG7Q6ZR37 379 aa12.87□□□□□ -0.35
CSRP1-201ENST00000340006 YIPF7Q8N8F6 280 aa12.87□□□□□ -0.35
CSRP1-201ENST00000340006 ZNF485Q8NCK3 441 aa12.87□□□□□ -0.35
CSRP1-201ENST00000340006 OR52N1Q8NH53 320 aa12.87□□□□□ -0.35
CSRP1-201ENST00000340006 ST7LQ8TDW4 575 aa12.87□□□□□ -0.35
CSRP1-201ENST00000340006 MED18Q9BUE0 208 aa12.87□□□□□ -0.35
CSRP1-201ENST00000340006 NAA50Q9GZZ1 169 aaKnown RBP12.87□□□□□ -0.35
CSRP1-201ENST00000340006 ELOVL3Q9HB03 270 aa12.87□□□□□ -0.35
CSRP1-201ENST00000340006 OBP2BQ9NPH6 170 aa12.87□□□□□ -0.35
CSRP1-201ENST00000340006 SLCO1C1Q9NYB5 712 aa12.87□□□□□ -0.35
CSRP1-201ENST00000340006 RSL24D1Q9UHA3 163 aaKnown RBP12.87□□□□□ -0.35
CSRP1-201ENST00000340006 CAB39Q9Y376 341 aaPredicted RBP12.87□□□□□ -0.35
CSRP1-201ENST00000340006 HCFC1P51610 2035 aa12.86□□□□□ -0.35
CSRP1-201ENST00000340006 ADGRG4Q8IZF6 3080 aa12.86□□□□□ -0.35
CSRP1-201ENST00000340006 ARPC4-TTLL3A0A0A6YYG9 625 aa12.86□□□□□ -0.35
CSRP1-201ENST00000340006 CCNOP22674 350 aa12.86□□□□□ -0.35
CSRP1-201ENST00000340006 GRNP28799 593 aaKnown RBP12.86□□□□□ -0.35
CSRP1-201ENST00000340006 HSD11B1P28845 292 aa12.86□□□□□ -0.35
CSRP1-201ENST00000340006 OR12D2P58182 307 aa12.86□□□□□ -0.35
CSRP1-201ENST00000340006 TAB1Q15750 504 aa12.86□□□□□ -0.35
CSRP1-201ENST00000340006 TP53I3Q53FA7 332 aa12.86□□□□□ -0.35
CSRP1-201ENST00000340006 KCTD20Q7Z5Y7 419 aa12.86□□□□□ -0.35
CSRP1-201ENST00000340006 ZNF679Q8IYX0 411 aa12.86□□□□□ -0.35
CSRP1-201ENST00000340006 ISOC1Q96CN7 298 aa12.86□□□□□ -0.35
CSRP1-201ENST00000340006 YIPF6Q96EC8 236 aa12.86□□□□□ -0.35
CSRP1-201ENST00000340006 OPALINQ96PE5 141 aa12.86□□□□□ -0.35
CSRP1-201ENST00000340006 ATF6BQ99941 703 aa12.86□□□□□ -0.35
CSRP1-201ENST00000340006 WNT5BQ9H1J7 359 aa12.86□□□□□ -0.35
CSRP1-201ENST00000340006 ISG20L2Q9H9L3 353 aaKnown RBP12.86□□□□□ -0.35
CSRP1-201ENST00000340006 METTL15A6NJ78 407 aa12.85□□□□□ -0.35
CSRP1-201ENST00000340006 ZNF878C9JN71 531 aa12.85□□□□□ -0.35
CSRP1-201ENST00000340006 F5H5K5 113 aa12.85□□□□□ -0.35
CSRP1-201ENST00000340006 GPR37O15354 613 aa12.85□□□□□ -0.35
CSRP1-201ENST00000340006 RPP14O95059 124 aaKnown RBP12.85□□□□□ -0.35
CSRP1-201ENST00000340006 CBR1P16152 277 aa12.85□□□□□ -0.35
CSRP1-201ENST00000340006 CD36P16671 472 aa12.85□□□□□ -0.35
CSRP1-201ENST00000340006 APEX1P27695 318 aaKnown RBP12.85□□□□□ -0.35
CSRP1-201ENST00000340006 TGFBR2P37173 567 aa12.85□□□□□ -0.35
CSRP1-201ENST00000340006 HTR5AP47898 357 aa12.85□□□□□ -0.35
CSRP1-201ENST00000340006 RGS6P49758 472 aa12.85□□□□□ -0.35
CSRP1-201ENST00000340006 ACTA2P62736 377 aa12.85□□□□□ -0.35
CSRP1-201ENST00000340006 ACTG2P63267 376 aa12.85□□□□□ -0.35
CSRP1-201ENST00000340006 HIST1H3AP68431 136 aa12.85□□□□□ -0.35
CSRP1-201ENST00000340006 TSTQ16762 297 aaKnown RBP12.85□□□□□ -0.35
CSRP1-201ENST00000340006 HIST2H3PS2Q5TEC6 136 aa12.85□□□□□ -0.35
CSRP1-201ENST00000340006 HIST2H3AQ71DI3 136 aa12.85□□□□□ -0.35
CSRP1-201ENST00000340006 VASH1Q7L8A9 365 aaPredicted RBP12.85□□□□□ -0.35
CSRP1-201ENST00000340006 FAM220AQ7Z4H9 259 aa12.85□□□□□ -0.35
CSRP1-201ENST00000340006 CPEB3Q8NE35 698 aaKnown RBP12.85□□□□□ -0.35
CSRP1-201ENST00000340006 OR1F12Q8NHA8 337 aa12.85□□□□□ -0.35
CSRP1-201ENST00000340006 ZNF420Q8TAQ5 688 aaPredicted RBP12.85□□□□□ -0.35
CSRP1-201ENST00000340006 RNF133Q8WVZ7 376 aa12.85□□□□□ -0.35
CSRP1-201ENST00000340006 SPRYD4Q8WW59 207 aaPredicted RBP12.85□□□□□ -0.35
CSRP1-201ENST00000340006 C4orf36Q96KX1 117 aa12.85□□□□□ -0.35
CSRP1-201ENST00000340006 WFIKKN1Q96NZ8 548 aa12.85□□□□□ -0.35
CSRP1-201ENST00000340006 N6AMT1Q9Y5N5 214 aa12.85□□□□□ -0.35
CSRP1-201ENST00000340006 SLC25A15Q9Y619 301 aa12.85□□□□□ -0.35
CSRP1-201ENST00000340006 PRR14LQ5THK1 2151 aa12.85□□□□□ -0.35
CSRP1-201ENST00000340006 PPP3CBP16298 524 aa12.85□□□□□ -0.35
CSRP1-201ENST00000340006 STOMP27105 288 aa12.85□□□□□ -0.35
CSRP1-201ENST00000340006 APLNRP35414 380 aa12.85□□□□□ -0.35
CSRP1-201ENST00000340006 IDH3GP51553 393 aaPredicted RBP12.85□□□□□ -0.35
CSRP1-201ENST00000340006 RIDAP52758 137 aaKnown RBP12.85□□□□□ -0.35
CSRP1-201ENST00000340006 MLLT11Q13015 90 aaPredicted RBP12.85□□□□□ -0.35
CSRP1-201ENST00000340006 RAB35Q15286 201 aa12.85□□□□□ -0.35
CSRP1-201ENST00000340006 C22orf34Q6ZV56 151 aa12.85□□□□□ -0.35
CSRP1-201ENST00000340006 OR10S1Q8NGN2 331 aa12.85□□□□□ -0.35
CSRP1-201ENST00000340006 LINC01560Q8TB33 94 aa12.85□□□□□ -0.35
CSRP1-201ENST00000340006 SLC7A6Q92536 515 aa12.85□□□□□ -0.35
CSRP1-201ENST00000340006 OR8B4Q96RC9 309 aa12.85□□□□□ -0.35
CSRP1-201ENST00000340006 HDHD2Q9H0R4 259 aa12.85□□□□□ -0.35
CSRP1-201ENST00000340006 OR10A4Q9H209 315 aa12.85□□□□□ -0.35
CSRP1-201ENST00000340006 NOX3Q9HBY0 568 aa12.85□□□□□ -0.35
CSRP1-201ENST00000340006 UBR5O95071 2799 aaPredicted RBP12.85□□□□□ -0.35
CSRP1-201ENST00000340006 TUBAL3A6NHL2 446 aa12.84□□□□□ -0.35
CSRP1-201ENST00000340006 CCRL2O00421 344 aa12.84□□□□□ -0.35
CSRP1-201ENST00000340006 NOL3O60936 208 aaKnown RBP12.84□□□□□ -0.35
CSRP1-201ENST00000340006 SULT1C4O75897 302 aa12.84□□□□□ -0.35
CSRP1-201ENST00000340006 MT-ND5P03915 603 aa12.84□□□□□ -0.35
CSRP1-201ENST00000340006 SERPINA5P05154 406 aa12.84□□□□□ -0.35
CSRP1-201ENST00000340006 CCL2P13500 99 aa12.84□□□□□ -0.35
CSRP1-201ENST00000340006 ZNF83P51522 516 aa12.84□□□□□ -0.35
CSRP1-201ENST00000340006 PRKXP51817 358 aa12.84□□□□□ -0.35
CSRP1-201ENST00000340006 TMBIM6P55061 237 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms