RNA–Protein interactions for RNA: ENST00000339950.4

USP1-201, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP1, Length 3,996 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-201ENST00000339950 VRK1Q99986 396 aaPredicted RBP10.75□□□□□ -0.69
USP1-201ENST00000339950 SLC2A4RGQ9NR83 387 aa10.75□□□□□ -0.69
USP1-201ENST00000339950 CYB5R1Q9UHQ9 305 aa10.75□□□□□ -0.69
USP1-201ENST00000339950 SLC5A6Q9Y289 635 aa10.75□□□□□ -0.69
USP1-201ENST00000339950 PPP3CBP16298 524 aa10.74□□□□□ -0.69
USP1-201ENST00000339950 CAPZBP47756 277 aa10.74□□□□□ -0.69
USP1-201ENST00000339950 ZP1P60852 638 aa10.74□□□□□ -0.69
USP1-201ENST00000339950 RAP2BP61225 183 aa10.74□□□□□ -0.69
USP1-201ENST00000339950 PLAURQ03405 335 aa10.74□□□□□ -0.69
USP1-201ENST00000339950 RALGAPA1Q6GYQ0 2036 aa10.74□□□□□ -0.69
USP1-201ENST00000339950 SLC51BQ86UW2 128 aa10.74□□□□□ -0.69
USP1-201ENST00000339950 SYS1Q8N2H4 156 aa10.74□□□□□ -0.69
USP1-201ENST00000339950 OR1L3Q8NH93 324 aa10.74□□□□□ -0.69
USP1-201ENST00000339950 RNASE11Q8TAA1 199 aaKnown RBP10.74□□□□□ -0.69
USP1-201ENST00000339950 MARCH1Q8TCQ1 289 aa10.74□□□□□ -0.69
USP1-201ENST00000339950 TCEAL3Q969E4 200 aa10.74□□□□□ -0.69
USP1-201ENST00000339950 HAVCR1Q96D42 359 aa10.74□□□□□ -0.69
USP1-201ENST00000339950 C20orf24Q9BUV8 137 aa10.74□□□□□ -0.69
USP1-201ENST00000339950 ZNF700Q9H0M5 742 aa10.74□□□□□ -0.69
USP1-201ENST00000339950 FBRSQ9HAH7 460 aa10.74□□□□□ -0.69
USP1-201ENST00000339950 APMAPQ9HDC9 416 aa10.74□□□□□ -0.69
USP1-201ENST00000339950 WBP1LQ9NX94 342 aa10.74□□□□□ -0.69
USP1-201ENST00000339950 R4GN57 208 aa10.74□□□□□ -0.69
USP1-201ENST00000339950 CXorf51AA0A1B0GTR3 108 aa10.74□□□□□ -0.69
USP1-201ENST00000339950 PRSS37A4D1T9 235 aa10.74□□□□□ -0.69
USP1-201ENST00000339950 TMEM212A6NML5 194 aa10.74□□□□□ -0.69
USP1-201ENST00000339950 F12P00748 615 aaPredicted RBP10.74□□□□□ -0.69
USP1-201ENST00000339950 SNRNP70P08621 437 aaKnown RBP10.74□□□□□ -0.69
USP1-201ENST00000339950 HRH1P35367 487 aa10.74□□□□□ -0.69
USP1-201ENST00000339950 OPRM1P35372 400 aa10.74□□□□□ -0.69
USP1-201ENST00000339950 RPL27P61353 136 aaKnown RBP10.74□□□□□ -0.69
USP1-201ENST00000339950 RASGEF1BQ0VAM2 473 aa10.74□□□□□ -0.69
USP1-201ENST00000339950 KLF9Q13886 244 aaPredicted RBP10.74□□□□□ -0.69
USP1-201ENST00000339950 SLC17A1Q14916 467 aa10.74□□□□□ -0.69
USP1-201ENST00000339950 OR51T1Q8NGJ9 327 aa10.74□□□□□ -0.69
USP1-201ENST00000339950 MIB2Q96AX9 1013 aa10.74□□□□□ -0.69
USP1-201ENST00000339950 TIMP4Q99727 224 aa10.74□□□□□ -0.69
USP1-201ENST00000339950 ZNF649Q9BS31 505 aa10.74□□□□□ -0.69
USP1-201ENST00000339950 RNF215Q9Y6U7 377 aa10.74□□□□□ -0.69
USP1-201ENST00000339950 TRAV36DV7A0A075B6V5 113 aa10.74□□□□□ -0.69
USP1-201ENST00000339950 A0A1W2PPC4 97 aa10.74□□□□□ -0.69
USP1-201ENST00000339950 H3BMH7 237 aa10.74□□□□□ -0.69
USP1-201ENST00000339950 NSA2O95478 260 aaKnown RBP10.74□□□□□ -0.69
USP1-201ENST00000339950 JMJD7P0C870 316 aa10.74□□□□□ -0.69
USP1-201ENST00000339950 S100A2P29034 98 aa10.74□□□□□ -0.69
USP1-201ENST00000339950 GPR3P46089 330 aa10.74□□□□□ -0.69
USP1-201ENST00000339950 CDCP2Q5VXM1 449 aa10.74□□□□□ -0.69
USP1-201ENST00000339950 FJX1Q86VR8 437 aa10.74□□□□□ -0.69
USP1-201ENST00000339950 STK35Q8TDR2 534 aa10.74□□□□□ -0.69
USP1-201ENST00000339950 TMED6Q8WW62 240 aa10.74□□□□□ -0.69
USP1-201ENST00000339950 ZNF524Q96C55 264 aa10.74□□□□□ -0.69
USP1-201ENST00000339950 SOX7Q9BT81 388 aa10.74□□□□□ -0.69
USP1-201ENST00000339950 ZNF576Q9H609 170 aa10.74□□□□□ -0.69
USP1-201ENST00000339950 PCDHGA9Q9Y5G4 932 aaKnown RBP10.74□□□□□ -0.69
USP1-201ENST00000339950 TNFRSF10CO14798 259 aa10.73□□□□□ -0.69
USP1-201ENST00000339950 RER1O15258 196 aa10.73□□□□□ -0.69
USP1-201ENST00000339950 LPLP06858 475 aa10.73□□□□□ -0.69
USP1-201ENST00000339950 ALOX5APP20292 161 aa10.73□□□□□ -0.69
USP1-201ENST00000339950 MRPS21P82921 87 aaKnown RBP10.73□□□□□ -0.69
USP1-201ENST00000339950 BMPERQ8N8U9 685 aa10.73□□□□□ -0.69
USP1-201ENST00000339950 SLC26A10Q8NG04 563 aa10.73□□□□□ -0.69
USP1-201ENST00000339950 OR52N4Q8NGI2 321 aa10.73□□□□□ -0.69
USP1-201ENST00000339950 SOSTQ9BQB4 213 aa10.73□□□□□ -0.69
USP1-201ENST00000339950 RBM7Q9Y580 266 aaKnown RBP10.73□□□□□ -0.69
USP1-201ENST00000339950 IGKV1D-42A0A075B6H8 117 aa10.73□□□□□ -0.69
USP1-201ENST00000339950 C1orf196B1AJZ1 125 aa10.73□□□□□ -0.69
USP1-201ENST00000339950 CTAG2O75638 210 aa10.73□□□□□ -0.69
USP1-201ENST00000339950 TXNDC12O95881 172 aa10.73□□□□□ -0.69
USP1-201ENST00000339950 CSF1P09603 554 aa10.73□□□□□ -0.69
USP1-201ENST00000339950 RBM34P42696 430 aaKnown RBP10.73□□□□□ -0.69
USP1-201ENST00000339950 HSD17B7P56937 341 aa10.73□□□□□ -0.69
USP1-201ENST00000339950 RPS11P62280 158 aaKnown RBP eCLIP10.73□□□□□ -0.69
USP1-201ENST00000339950 KIAA2026Q5HYC2 2103 aa10.73□□□□□ -0.69
USP1-201ENST00000339950 SPIN3Q5JUX0 258 aa10.73□□□□□ -0.69
USP1-201ENST00000339950 FHL5Q5TD97 284 aa10.73□□□□□ -0.69
USP1-201ENST00000339950 ZNF585AQ6P3V2 769 aa10.73□□□□□ -0.69
USP1-201ENST00000339950 RTN4RL2Q86UN3 420 aa10.73□□□□□ -0.69
USP1-201ENST00000339950 PLXDC1Q8IUK5 500 aa10.73□□□□□ -0.69
USP1-201ENST00000339950 PTPMT1Q8WUK0 201 aaPredicted RBP10.73□□□□□ -0.69
USP1-201ENST00000339950 TMEM234Q8WY98 164 aa10.73□□□□□ -0.69
USP1-201ENST00000339950 TM4SF19Q96DZ7 209 aa10.73□□□□□ -0.69
USP1-201ENST00000339950 LIN37Q96GY3 246 aaPredicted RBP10.73□□□□□ -0.69
USP1-201ENST00000339950 C4orf45Q96LM5 186 aa10.73□□□□□ -0.69
USP1-201ENST00000339950 PFDN5Q99471 154 aa10.73□□□□□ -0.69
USP1-201ENST00000339950 JAM3Q9BX67 310 aa10.73□□□□□ -0.69
USP1-201ENST00000339950 TMPRSS13Q9BYE2 586 aa10.73□□□□□ -0.69
USP1-201ENST00000339950 VN1R1Q9GZP7 353 aa10.73□□□□□ -0.69
USP1-201ENST00000339950 PLEK2Q9NYT0 353 aa10.73□□□□□ -0.69
USP1-201ENST00000339950 ZNF407Q9C0G0 2248 aa10.73□□□□□ -0.69
USP1-201ENST00000339950 OR4C45A6NMZ5 311 aa10.73□□□□□ -0.69
USP1-201ENST00000339950 SULT2B1O00204 365 aa10.73□□□□□ -0.69
USP1-201ENST00000339950 ANGPTL7O43827 346 aa10.73□□□□□ -0.69
USP1-201ENST00000339950 OR2J2O76002 312 aa10.73□□□□□ -0.69
USP1-201ENST00000339950 CSTBP04080 98 aaKnown RBP10.73□□□□□ -0.69
USP1-201ENST00000339950 OR4E1P0C645 316 aa10.73□□□□□ -0.69
USP1-201ENST00000339950 EDN3P14138 238 aa10.73□□□□□ -0.69
USP1-201ENST00000339950 ASCL1P50553 236 aa10.73□□□□□ -0.69
USP1-201ENST00000339950 CLDN17P56750 224 aa10.73□□□□□ -0.69
USP1-201ENST00000339950 ACTBP60709 375 aa10.73□□□□□ -0.69
USP1-201ENST00000339950 ACTG1P63261 375 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms