RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 SLC35G6P0C7Q6 338 aa8.7□□□□□ -1.02
PTCHD4-201ENST00000339488 MMP9P14780 707 aa8.7□□□□□ -1.02
PTCHD4-201ENST00000339488 PPM1FP49593 454 aaPredicted RBP8.7□□□□□ -1.02
PTCHD4-201ENST00000339488 RAB1AP62820 205 aa8.7□□□□□ -1.02
PTCHD4-201ENST00000339488 COL10A1Q03692 680 aa8.7□□□□□ -1.02
PTCHD4-201ENST00000339488 CRMP1Q14194 572 aa8.7□□□□□ -1.02
PTCHD4-201ENST00000339488 CDK5R1Q15078 307 aa8.7□□□□□ -1.02
PTCHD4-201ENST00000339488 ATP6V1FQ16864 119 aa8.7□□□□□ -1.02
PTCHD4-201ENST00000339488 SLC22A6Q4U2R8 563 aa8.7□□□□□ -1.02
PTCHD4-201ENST00000339488 WDR25Q64LD2 544 aaPredicted RBP8.7□□□□□ -1.02
PTCHD4-201ENST00000339488 GRHL2Q6ISB3 625 aa8.7□□□□□ -1.02
PTCHD4-201ENST00000339488 MED27Q6P2C8 311 aa8.7□□□□□ -1.02
PTCHD4-201ENST00000339488 CD300LDQ6UXZ3 194 aa8.7□□□□□ -1.02
PTCHD4-201ENST00000339488 SLC24A4Q8NFF2 622 aa8.7□□□□□ -1.02
PTCHD4-201ENST00000339488 UBTD2Q8WUN7 234 aa8.7□□□□□ -1.02
PTCHD4-201ENST00000339488 FGF13Q92913 245 aa8.7□□□□□ -1.02
PTCHD4-201ENST00000339488 HLA-CQ95604 372 aa8.7□□□□□ -1.02
PTCHD4-201ENST00000339488 MOAP1Q96BY2 351 aa8.7□□□□□ -1.02
PTCHD4-201ENST00000339488 C16orf58Q96GQ5 468 aa8.7□□□□□ -1.02
PTCHD4-201ENST00000339488 PBDC1Q9BVG4 233 aa8.7□□□□□ -1.02
PTCHD4-201ENST00000339488 ADAM19Q9H013 955 aa8.7□□□□□ -1.02
PTCHD4-201ENST00000339488 CSTL1Q9H114 145 aa8.7□□□□□ -1.02
PTCHD4-201ENST00000339488 SLC35B3Q9H1N7 401 aa8.7□□□□□ -1.02
PTCHD4-201ENST00000339488 PARP11Q9NR21 331 aa8.7□□□□□ -1.02
PTCHD4-201ENST00000339488 GPR34Q9UPC5 381 aa8.7□□□□□ -1.02
PTCHD4-201ENST00000339488 PAM16Q9Y3D7 125 aa8.7□□□□□ -1.02
PTCHD4-201ENST00000339488 SSC5DA1L4H1 1573 aa8.7□□□□□ -1.02
PTCHD4-201ENST00000339488 MCM3APO60318 1980 aa8.69□□□□□ -1.02
PTCHD4-201ENST00000339488 IGKV6-21A0A0C4DH24 114 aa8.69□□□□□ -1.02
PTCHD4-201ENST00000339488 XKRY2A2RUG3 117 aa8.69□□□□□ -1.02
PTCHD4-201ENST00000339488 METTL12A8MUP2 240 aa8.69□□□□□ -1.02
PTCHD4-201ENST00000339488 BHLHE40O14503 412 aa8.69□□□□□ -1.02
PTCHD4-201ENST00000339488 XKRYO14609 159 aa8.69□□□□□ -1.02
PTCHD4-201ENST00000339488 ABLIM3O94929 683 aa8.69□□□□□ -1.02
PTCHD4-201ENST00000339488 RPP14O95059 124 aaKnown RBP8.69□□□□□ -1.02
PTCHD4-201ENST00000339488 GSTM3P21266 225 aa8.69□□□□□ -1.02
PTCHD4-201ENST00000339488 TIA1P31483 386 aaKnown RBP eCLIP8.69□□□□□ -1.025e-7■■■■□ 21
PTCHD4-201ENST00000339488 AKT2P31751 481 aa8.69□□□□□ -1.02
PTCHD4-201ENST00000339488 NFATC2Q13469 925 aa8.69□□□□□ -1.02
PTCHD4-201ENST00000339488 NBPF12Q5TAG4 269 aaPredicted RBP8.69□□□□□ -1.02
PTCHD4-201ENST00000339488 FKBP1CQ5VVH2 108 aa8.69□□□□□ -1.02
PTCHD4-201ENST00000339488 OR8G2PQ6IF36 304 aa8.69□□□□□ -1.02
PTCHD4-201ENST00000339488 OVCH1Q7RTY7 1134 aa8.69□□□□□ -1.02
PTCHD4-201ENST00000339488 NUFIP2Q7Z417 695 aaKnown RBP8.69□□□□□ -1.02
PTCHD4-201ENST00000339488 GCNT2Q8N0V5 402 aa8.69□□□□□ -1.02
PTCHD4-201ENST00000339488 OR2T33Q8NG76 320 aa8.69□□□□□ -1.02
PTCHD4-201ENST00000339488 OR1P1Q8NH06 330 aa8.69□□□□□ -1.02
PTCHD4-201ENST00000339488 SLC17A9Q9BYT1 436 aa8.69□□□□□ -1.02
PTCHD4-201ENST00000339488 CNTNAP3Q9BZ76 1288 aa8.69□□□□□ -1.02
PTCHD4-201ENST00000339488 ADGRL4Q9HBW9 690 aa8.69□□□□□ -1.02
PTCHD4-201ENST00000339488 IL17CQ9P0M4 197 aa8.69□□□□□ -1.02
PTCHD4-201ENST00000339488 DOCK8Q8NF50 2099 aa8.69□□□□□ -1.02
PTCHD4-201ENST00000339488 A0A1B0GTH9 108 aa8.69□□□□□ -1.02
PTCHD4-201ENST00000339488 HMGN4O00479 90 aa8.69□□□□□ -1.02
PTCHD4-201ENST00000339488 RAMP2O60895 175 aa8.69□□□□□ -1.02
PTCHD4-201ENST00000339488 PRH1P02810 166 aa8.69□□□□□ -1.02
PTCHD4-201ENST00000339488 CTSBP07858 339 aa8.69□□□□□ -1.02
PTCHD4-201ENST00000339488 TUBG1P23258 451 aa8.69□□□□□ -1.02
PTCHD4-201ENST00000339488 ZBTB25P24278 435 aa8.69□□□□□ -1.02
PTCHD4-201ENST00000339488 BMI1P35226 326 aa8.69□□□□□ -1.02
PTCHD4-201ENST00000339488 ALDH3B1P43353 468 aa8.69□□□□□ -1.02
PTCHD4-201ENST00000339488 TAF6P49848 677 aa8.69□□□□□ -1.02
PTCHD4-201ENST00000339488 SMIM11AP58511 58 aa8.69□□□□□ -1.02
PTCHD4-201ENST00000339488 FXYD6P3P58550 94 aa8.69□□□□□ -1.02
PTCHD4-201ENST00000339488 EIF5AP63241 154 aaKnown RBP8.69□□□□□ -1.02
PTCHD4-201ENST00000339488 MMDQ15546 238 aa8.69□□□□□ -1.02
PTCHD4-201ENST00000339488 LDLRAD2Q5SZI1 272 aa8.69□□□□□ -1.02
PTCHD4-201ENST00000339488 C1orf194Q5T5A4 169 aa8.69□□□□□ -1.02
PTCHD4-201ENST00000339488 PRPF38BQ5VTL8 546 aaKnown RBP8.69□□□□□ -1.02
PTCHD4-201ENST00000339488 ABLIM2Q6H8Q1 611 aa8.69□□□□□ -1.02
PTCHD4-201ENST00000339488 C16orf59Q7L2K0 433 aa8.69□□□□□ -1.02
PTCHD4-201ENST00000339488 LYG2Q86SG7 212 aa8.69□□□□□ -1.02
PTCHD4-201ENST00000339488 DND1Q8IYX4 353 aaKnown RBP8.69□□□□□ -1.02
PTCHD4-201ENST00000339488 OR4X1Q8NH49 305 aa8.69□□□□□ -1.02
PTCHD4-201ENST00000339488 TOMM40LQ969M1 308 aa8.69□□□□□ -1.02
PTCHD4-201ENST00000339488 SMIM19Q96E16 107 aa8.69□□□□□ -1.02
PTCHD4-201ENST00000339488 SLC5A7Q9GZV3 580 aa8.69□□□□□ -1.02
PTCHD4-201ENST00000339488 ASB8Q9H765 288 aa8.69□□□□□ -1.02
PTCHD4-201ENST00000339488 METTL8Q9H825 291 aaKnown RBP8.69□□□□□ -1.02
PTCHD4-201ENST00000339488 RRAGCQ9HB90 399 aa8.69□□□□□ -1.02
PTCHD4-201ENST00000339488 FOXD3Q9UJU5 478 aaPredicted RBP8.69□□□□□ -1.02
PTCHD4-201ENST00000339488 PITPNC1Q9UKF7 332 aa8.69□□□□□ -1.02
PTCHD4-201ENST00000339488 V9GYS6 101 aa8.69□□□□□ -1.02
PTCHD4-201ENST00000339488 KIR2DL5BA0A0G2JN68 375 aa8.68□□□□□ -1.02
PTCHD4-201ENST00000339488 KIR2DL5BA0A0G2JPC4 375 aa8.68□□□□□ -1.02
PTCHD4-201ENST00000339488 GGCTO75223 188 aaKnown RBP8.68□□□□□ -1.02
PTCHD4-201ENST00000339488 PAPLNO95428 1278 aa8.68□□□□□ -1.02
PTCHD4-201ENST00000339488 TBX18O95935 607 aa8.68□□□□□ -1.02
PTCHD4-201ENST00000339488 FURINP09958 794 aa8.68□□□□□ -1.02
PTCHD4-201ENST00000339488 HKR1P10072 659 aa8.68□□□□□ -1.02
PTCHD4-201ENST00000339488 CD37P11049 281 aa8.68□□□□□ -1.02
PTCHD4-201ENST00000339488 PI3P19957 117 aa8.68□□□□□ -1.02
PTCHD4-201ENST00000339488 CR2P20023 1033 aa8.68□□□□□ -1.02
PTCHD4-201ENST00000339488 CAMLGP49069 296 aa8.68□□□□□ -1.02
PTCHD4-201ENST00000339488 PRKAG1P54619 331 aa8.68□□□□□ -1.02
PTCHD4-201ENST00000339488 LILRA4P59901 499 aa8.68□□□□□ -1.02
PTCHD4-201ENST00000339488 ACTBP60709 375 aa8.68□□□□□ -1.02
PTCHD4-201ENST00000339488 ACTG1P63261 375 aa8.68□□□□□ -1.02
PTCHD4-201ENST00000339488 FOXK1P85037 733 aa8.68□□□□□ -1.02
PTCHD4-201ENST00000339488 RAB32Q13637 225 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms